CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY06733	Canola	cytosol	97.87	97.87
AT1G47510.1	Thale cress	nucleus, plastid	82.98	81.74
VIT_18s0001g11790.t01	Wine grape	cytosol	57.45	59.43
PGSC0003DMT400043508	Potato	cytosol	53.8	55.14
Os03t0626500-00	Rice	cytosol	52.89	55.06
GSMUA_Achr3P15110_001	Banana	cytosol	52.89	52.73
Solyc04g079820.2.1	Tomato	cytosol	53.8	52.37
EER93785	Sorghum	cytosol	52.89	51.48
TraesCS4D01G069300.2	Wheat	cytosol	52.58	51.34
HORVU0Hr1G007680.12	Barley	cytosol	51.98	51.04
TraesCS4B01G070500.1	Wheat	cytosol	52.58	50.88
TraesCS4A01G244500.1	Wheat	cytosol	51.67	50.45
Zm00001d033300_P001	Maize	cytosol	51.67	48.99
KRH15266	Soybean	extracellular, golgi, mitochondrion	57.14	48.7
KRH05773	Soybean	mitochondrion	44.07	44.62
CDY07455	Canola	cytosol	28.57	9.92
CDY47263	Canola	plastid	28.57	9.85
CDY39279	Canola	cytosol	28.27	9.59
CDY10014	Canola	cytosol, plastid	27.96	8.49
CDY10132	Canola	cytosol	28.57	8.4
CDX86567	Canola	cytosol	27.66	8.32
CDY15548	Canola	cytosol	27.36	8.19
CDY34516	Canola	cytosol	27.66	8.05
CDY06178	Canola	cytosol	27.96	8.05
CDY42072	Canola	cytosol	27.96	8.03
CDX95575	Canola	nucleus	29.48	7.48

Protein Annotations

MapMan:27.5.4.3	Gene3D:3.60.10.10	GO:A0A078FWI8	UniProt:A0A078FWI8	EnsemblPlants:CDY17072	ProteinID:CDY17072
ProteinID:CDY17072.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0006629
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:GSBRNA2T00095068001
InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF247	SMART:SM00128
SUPFAM:SSF56219	UniParc:UPI0004EDF289	SEG:seg	:	:	:

Description

BnaC06g00050DBnaC06g00050D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWI8]

Coordinates

chrLK032070:+:97238..99527

Molecular Weight (calculated)

36879.2 Da

IEP (calculated)

9.954

GRAVY (calculated)

-0.433

Length

329 amino acids

Sequence
(BLAST)

001: MGNTNSLCGR KGFYNKETLL SSVGNNSSHD GIRTIEAVKS CSFSRKSDLC IRIITWNMNG KVSYEDLVQL VGKDRKFDLL VVGVQEAPKT NVAQLLQTAS
101: SPTHVLLGKA KLQSIQLLLF GPKNSQPLVK ELKAESQSVG GCGGLIGRKK GAVAIRINYD DIKIVFISCH LSAHANKVDQ RNEELRRISN SLISKDKRTH
201: DLIVWLGDLN YRIQDVSNRP ARSLIQNHLQ SVLVRKDQLL QEAERGEIFK GYNEGTLGFK PTYKYNVGSS NYDTSHKVRV PAWTDRILYK IQDTKNIQTT
301: LYSYDSIDQV NGSDHKPVKA DLCLKWINS

Best Arabidopsis Sequence Match ( AT1G47510.1 )
(BLAST)

001: MPTMGNKNSM CGLKRFPNYK KSPIGSFAKN SSSHDGIKTI EAVNSCSFSR KADLCIRIIT WNMNGNVSYE DLVELVGKER KFDLLVVGLQ EAPKANVDQL
101: LQTASSPTHE LLGKAKLQSV QLYLFGPKNS HTLVKELKAE RYSVGGCGGL IGRKKGAVAI RINYDDIKMV FISCHLSAHA KKVDQRNTEL RHIANSLLPR
201: DKRKRDLTVW LGDLNYRIQD VSNHPVRSLI QNHLQSVLVS KDQLLQEAER GEIFKGYSEG TLGFKPTYKY NVGSSDYDTS HKIRVPAWTD RILFKIQDTD
301: NIQATLHSYD SIDQVYGSDH KPVKADLCLK WVNS

Arabidopsis Description

IP5P11Type IV inositol polyphosphate 5-phosphatase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q5EAF2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.