Factsheet for VIT_18s0001g11790.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400043508	Potato	cytosol	66.98	66.36
Solyc04g079820.2.1	Tomato	cytosol	65.72	61.83
GSMUA_Achr3P15110_001	Banana	cytosol	62.58	60.3
Os03t0626500-00	Rice	cytosol	58.18	58.54
CDY17072	Canola	cytosol	59.43	57.45
Bra015615.1-P	Field mustard	cytosol	58.49	56.53
CDY06733	Canola	cytosol	58.49	56.53
AT1G47510.1	Thale cress	nucleus, plastid	59.12	56.29
KRH15266	Soybean	extracellular, golgi, mitochondrion	67.3	55.44
TraesCS4D01G069300.2	Wheat	cytosol	57.55	54.3
EER93785	Sorghum	cytosol	57.23	53.85
TraesCS4B01G070500.1	Wheat	cytosol	57.23	53.53
HORVU0Hr1G007680.12	Barley	cytosol	55.97	53.13
TraesCS4A01G244500.1	Wheat	cytosol	55.66	52.52
Zm00001d033300_P001	Maize	cytosol	56.29	51.59
KRH05773	Soybean	mitochondrion	51.26	50.15
VIT_00s0220g00160.t01	Wine grape	cytosol	28.3	10.83
VIT_05s0094g01330.t01	Wine grape	cytosol	28.62	8.78
VIT_00s0220g00170.t01	Wine grape	nucleus	1.26	1.44

Protein Annotations

EntrezGene:100266023	wikigene:100266023	MapMan:27.5.4.3	Gene3D:3.60.10.10	ProteinID:CBI19629	ProteinID:CBI19629.3
ncoils:Coil	UniProt:E0CPY3	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	EMBL:FN595227	GO:GO:0003674
GO:GO:0003824	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	EntrezGene:LOC100266023	wikigene:LOC100266023	PFAM:PF03372
PANTHER:PTHR11200	PANTHER:PTHR11200:SF247	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI00015C8156	ArrayExpress:VIT_18s0001g11790
EnsemblPlantsGene:VIT_18s0001g11790	EnsemblPlants:VIT_18s0001g11790.t01	RefSeq:XP_002281898	RefSeq:XP_002281898.1	:	:

Description

No Description!

Coordinates

chr18:+:10062673..10065015

Molecular Weight (calculated)

35838.1 Da

IEP (calculated)

9.286

GRAVY (calculated)

-0.319

Length

318 amino acids

Sequence
(BLAST)

001: MNDLATNHDG IRTVRADNRC DFSGSSDLCI CVVTWNMNGQ VSYKDIEQLV GSDREFDLLV VGLQEAPRNN ISQLLQAALV ETHILLGKAI MQSLQLYVFG
101: QKMNSELFIN ELKVDKHAVG GFGGLIRRKK GAVAVNIIYK GIRMLFICCH LSAHAGNVED RNSQYRHISR SLFSKNQNPY ARPVQVTVWL GDLNYRVQGI
201: DTHPARNLVQ KNLHRLLTRK DQLLQEAERG QIFSGYCEGT LAFKPTYKYN IGSSNYDTSY KVRVPSWTDR ILFKIEDSGK ISATLHSYQS IDGIHSSDHK
301: PVKAHLCLQA SKQSPLMP

Best Arabidopsis Sequence Match ( AT1G47510.1 )
(BLAST)

001: MPTMGNKNSM CGLKRFPNYK KSPIGSFAKN SSSHDGIKTI EAVNSCSFSR KADLCIRIIT WNMNGNVSYE DLVELVGKER KFDLLVVGLQ EAPKANVDQL
101: LQTASSPTHE LLGKAKLQSV QLYLFGPKNS HTLVKELKAE RYSVGGCGGL IGRKKGAVAI RINYDDIKMV FISCHLSAHA KKVDQRNTEL RHIANSLLPR
201: DKRKRDLTVW LGDLNYRIQD VSNHPVRSLI QNHLQSVLVS KDQLLQEAER GEIFKGYSEG TLGFKPTYKY NVGSSDYDTS HKIRVPAWTD RILFKIQDTD
301: NIQATLHSYD SIDQVYGSDH KPVKADLCLK WVNS

Arabidopsis Description

IP5P11Type IV inositol polyphosphate 5-phosphatase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q5EAF2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.