CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033300_P001	Maize	cytosol	86.69	84.44
Os03t0626500-00	Rice	cytosol	76.92	82.28
TraesCS4A01G244500.1	Wheat	cytosol	78.11	78.34
TraesCS4D01G069300.2	Wheat	cytosol	77.51	77.74
HORVU0Hr1G007680.12	Barley	cytosol	76.04	76.72
TraesCS4B01G070500.1	Wheat	cytosol	76.92	76.47
GSMUA_Achr3P15110_001	Banana	cytosol	58.28	59.7
PGSC0003DMT400043508	Potato	cytosol	55.03	57.94
VIT_18s0001g11790.t01	Wine grape	cytosol	53.85	57.23
Solyc04g079820.2.1	Tomato	cytosol	54.73	54.73
CDY17072	Canola	cytosol	51.48	52.89
Bra015615.1-P	Field mustard	cytosol	50.89	52.28
CDY06733	Canola	cytosol	50.89	52.28
AT1G47510.1	Thale cress	nucleus, plastid	50.59	51.2
KRH15266	Soybean	extracellular, golgi, mitochondrion	55.33	48.45
KRH05773	Soybean	mitochondrion	42.6	44.31
EES15333	Sorghum	cytosol	32.84	9.69
OQU84937	Sorghum	cytosol	31.36	9.58
KXG35959	Sorghum	cytosol	32.84	9.34

Protein Annotations

MapMan:27.5.4.3	Gene3D:3.60.10.10	EntrezGene:8062479	UniProt:C5WS65	EnsemblPlants:EER93785	ProteinID:EER93785
ProteinID:EER93785.1	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674	GO:GO:0003824	GO:GO:0004439
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006629	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009733
GO:GO:0009737	GO:GO:0009753	GO:GO:0009987	GO:GO:0016020	GO:GO:0016787	GO:GO:0034485
GO:GO:0036092	GO:GO:0043813	GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691	PFAM:PF03372
PANTHER:PTHR11200	PANTHER:PTHR11200:SF247	SMART:SM00128	EnsemblPlantsGene:SORBI_3001G162700	SUPFAM:SSF56219	unigene:Sbi.973
UniParc:UPI0001A82BE5	RefSeq:XP_002466787.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:13414143..13416529

Molecular Weight (calculated)

37570.1 Da

IEP (calculated)

8.316

GRAVY (calculated)

-0.289

Length

338 amino acids

Sequence
(BLAST)

001: MGNCSSFTLP KWGSKLLNNG MVSIDEDGTH EGIKTIPVQK VCEFTTNSVL CICIVTWNMN SKMSVEDVTK LVSSNRKFDL LVVGLQEAPK SDVSQVLQEA
101: LAETHVLLGQ KSMQSLQMLL FGSRSSEKYI REMKVDKHAV GGCGGIIGRK KGAVAMYINF SGIRMVFVSC HLAAHEHKVE KRNSEFQHIS QSLFSKYGTP
201: YAQSADITVW LGDLNYRLEG ISSMPARKMI EENRQSKLRG KDQLLQEAEK GEVFNGYCEG TLSFKPTYKY DVGSSIYDTS SKIRVPSWTD RILFKVGHSS
301: GLDAVLSSYE SLDCVRSSDH KPVKAHLCLR VRSDGDAD

Best Arabidopsis Sequence Match ( AT1G47510.1 )
(BLAST)

001: MPTMGNKNSM CGLKRFPNYK KSPIGSFAKN SSSHDGIKTI EAVNSCSFSR KADLCIRIIT WNMNGNVSYE DLVELVGKER KFDLLVVGLQ EAPKANVDQL
101: LQTASSPTHE LLGKAKLQSV QLYLFGPKNS HTLVKELKAE RYSVGGCGGL IGRKKGAVAI RINYDDIKMV FISCHLSAHA KKVDQRNTEL RHIANSLLPR
201: DKRKRDLTVW LGDLNYRIQD VSNHPVRSLI QNHLQSVLVS KDQLLQEAER GEIFKGYSEG TLGFKPTYKY NVGSSDYDTS HKIRVPAWTD RILFKIQDTD
301: NIQATLHSYD SIDQVYGSDH KPVKADLCLK WVNS

Arabidopsis Description

IP5P11Type IV inositol polyphosphate 5-phosphatase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q5EAF2]
SUBAcon: [nucleus,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.