CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 2
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015615.1-P	Field mustard	cytosol	100.0	100.0
CDY17072	Canola	cytosol	97.87	97.87
AT1G47510.1	Thale cress	nucleus, plastid	81.46	80.24
VIT_18s0001g11790.t01	Wine grape	cytosol	56.53	58.49
Os03t0626500-00	Rice	cytosol	52.28	54.43
PGSC0003DMT400043508	Potato	cytosol	52.58	53.89
GSMUA_Achr3P15110_001	Banana	cytosol	51.98	51.82
Solyc04g079820.2.1	Tomato	cytosol	52.58	51.18
TraesCS4D01G069300.2	Wheat	cytosol	52.28	51.04
EER93785	Sorghum	cytosol	52.28	50.89
TraesCS4B01G070500.1	Wheat	cytosol	52.28	50.59
HORVU0Hr1G007680.12	Barley	cytosol	51.37	50.45
TraesCS4A01G244500.1	Wheat	cytosol	51.06	49.85
Zm00001d033300_P001	Maize	cytosol	51.06	48.41
KRH15266	Soybean	extracellular, golgi, mitochondrion	56.53	48.19
KRH05773	Soybean	mitochondrion	44.07	44.62
CDY07455	Canola	cytosol	28.88	10.02
CDY47263	Canola	plastid	28.88	9.96
CDY39279	Canola	cytosol	28.57	9.69
CDY10014	Canola	cytosol, plastid	28.27	8.59
CDY10132	Canola	cytosol	29.18	8.58
CDX86567	Canola	cytosol	27.96	8.41
CDY15548	Canola	cytosol	27.66	8.28
CDY34516	Canola	cytosol	27.96	8.14
CDY06178	Canola	cytosol	28.27	8.14
CDY42072	Canola	cytosol	28.27	8.12
CDX95575	Canola	nucleus	30.09	7.64

Protein Annotations

EnsemblPlants:CDY06733	EnsemblPlantsGene:GSBRNA2T00122925001	Gene3D:3.60.10.10	GO:A0A078F4V3	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0046856	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	InterPro:IPPc
InterPro:IPR036691	PANTHER:PTHR11200	PANTHER:PTHR11200:SF247	PFAM:PF03372	ProteinID:CDY06733	ProteinID:CDY06733.1
SEG:seg	SMART:SM00128	SUPFAM:SSF56219	UniParc:UPI00025449F8	MapMan:27.5.4.3	:

Description

BnaA10g05120D

Coordinates

chrLK031972:+:636867..639363

Molecular Weight (calculated)

36828.2 Da

IEP (calculated)

9.993

GRAVY (calculated)

-0.417

Length

329 amino acids

Sequence
(BLAST)

001: MGNTNSLCGR KGFYNKETLI SSVGNNSSHD GIRTIEAVKS CSFSRKSDLC IRIITWNMNG KVSYDDLVQL VGKDRKFDLL VVGVQEAPKT NVAQLLQTAS
101: SPTHVLLGKA KLQSIQLLLF GPKNSQPLVK DLKAESQSVG GCGGLIGRKK GAVAIRINYG DIKIVFISCH LSAHANKVDQ RNEELRRISN SLISKDKRTH
201: DLIVWLGDLN YRIQDVSNRP ARSLIQNHLQ SVLVRKDQLL QEADRGEIFK GYYEGTLGFK PTYKYNVGSS NYDTSHKVRV PAWTDRILYK IQDTKNIQTT
301: LYSYDSLDQV NGSDHKPVKA DLCLKWINS

Best Arabidopsis Sequence Match ( AT1G47510.1 )
(BLAST)

001: MPTMGNKNSM CGLKRFPNYK KSPIGSFAKN SSSHDGIKTI EAVNSCSFSR KADLCIRIIT WNMNGNVSYE DLVELVGKER KFDLLVVGLQ EAPKANVDQL
101: LQTASSPTHE LLGKAKLQSV QLYLFGPKNS HTLVKELKAE RYSVGGCGGL IGRKKGAVAI RINYDDIKMV FISCHLSAHA KKVDQRNTEL RHIANSLLPR
201: DKRKRDLTVW LGDLNYRIQD VSNHPVRSLI QNHLQSVLVS KDQLLQEAER GEIFKGYSEG TLGFKPTYKY NVGSSDYDTS HKIRVPAWTD RILFKIQDTD
301: NIQATLHSYD SIDQVYGSDH KPVKADLCLK WVNS

Arabidopsis Description

IP5P11Type IV inositol polyphosphate 5-phosphatase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q5EAF2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.