Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42072 | Canola | cytosol | 96.19 | 94.93 |
| Bra005638.1-P | Field mustard | cytosol | 92.12 | 90.84 |
| AT2G31830.2 | Thale cress | cytosol | 83.1 | 80.05 |
| CDY47263 | Canola | plastid | 61.42 | 72.75 |
| CDY10132 | Canola | cytosol | 69.73 | 70.42 |
| CDX86567 | Canola | cytosol | 67.17 | 69.38 |
| CDY15548 | Canola | cytosol | 67.35 | 69.24 |
| CDY10014 | Canola | cytosol, plastid | 66.11 | 68.98 |
| CDY06178 | Canola | cytosol | 67.17 | 66.4 |
| KRH51310 | Soybean | cytosol | 57.96 | 59.33 |
| KRH01854 | Soybean | cytosol | 32.04 | 58.48 |
| KRH01856 | Soybean | cytosol | 26.55 | 58.14 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 52.74 | 57.53 |
| Solyc12g019080.1.1 | Tomato | nucleus | 51.86 | 55.13 |
| Solyc08g014580.2.1 | Tomato | nucleus | 56.02 | 54.66 |
| PGSC0003DMT400064953 | Potato | cytosol | 55.84 | 54.21 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 48.5 | 53.67 |
| PGSC0003DMT400052499 | Potato | nucleus | 54.69 | 53.65 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 30.89 | 52.64 |
| CDY07455 | Canola | cytosol | 43.98 | 52.43 |
| CDY39279 | Canola | cytosol | 44.6 | 51.96 |
| CDX95575 | Canola | nucleus | 59.38 | 51.77 |
| Zm00001d028271_P001 | Maize | cytosol | 12.83 | 51.24 |
| Os09t0500300-01 | Rice | cytosol | 44.51 | 50.25 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 18.23 | 49.76 |
| Solyc12g096660.1.1 | Tomato | cytosol | 51.68 | 48.99 |
| Os08t0524100-01 | Rice | nucleus | 47.43 | 48.42 |
| GSMUA_Achr11P... | Banana | cytosol | 48.67 | 47.74 |
| EES15333 | Sorghum | cytosol | 48.23 | 47.6 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 19.29 | 47.29 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 49.03 | 46.79 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 49.03 | 46.71 |
| Zm00001d031554_P003 | Maize | nucleus | 46.02 | 46.55 |
| Zm00001d006063_P002 | Maize | cytosol | 48.85 | 46.54 |
| Zm00001d021014_P001 | Maize | cytosol | 48.5 | 46.44 |
| KXG35959 | Sorghum | cytosol | 48.76 | 46.38 |
| Zm00001d049785_P003 | Maize | cytosol | 46.28 | 46.12 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 47.08 | 46.06 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 47.08 | 45.94 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 46.9 | 45.77 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 46.73 | 45.52 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 48.94 | 45.37 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 49.12 | 44.12 |
| CDY06733 | Canola | cytosol | 8.14 | 27.96 |
| CDY17072 | Canola | cytosol | 8.05 | 27.66 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | GO:A0A078H9Z2 | UniProt:A0A078H9Z2 | EnsemblPlants:CDY34516 |
| ProteinID:CDY34516 | ProteinID:CDY34516.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0046856 | EnsemblPlantsGene:GSBRNA2T00056900001 | InterPro:IPPc | InterPro:IPR000535 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR036691 | InterPro:MSP_dom | PFAM:PF03372 | PFscan:PS50202 | PANTHER:PTHR11200 |
| PANTHER:PTHR11200:SF137 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 | UniParc:UPI0004EE3867 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | SEG:seg | : | : | : |
Description
BnaC04g12830DBnaC04g12830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9Z2]
Coordinates
chrLK032335:-:391782..396571
Molecular Weight (calculated)
124474.0 Da
IEP (calculated)
7.195
GRAVY (calculated)
-0.412
Length
1130 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSVIIEPDE REALSSLVPS HPPPRKTHSY VEQYEQKPQH HPIRKYSLDE GSRSVPTDSE PVYFDSSDGE FSTVDGRNGG DRGNEEDHCV ITPPSKPAPQ
0101: RGEIAGHGGG GGADIEPLPE FMGAGGGVDV FKVPVRAAVN PGRPPCLEIR PHPLRETQTG KFLRNIACTE SQLWSGQENG VRFWNLEEAY EVGYGVGGQV
0201: RRGDEDTAPF HESVVISPTL CLMIDHGNRL VWSGHKDGKI RAWKMDHPVT NTADDSKPFK ERLSWQAHRG PVNYIVISSY GDMWSCSDGG VIKIWTFDSL
0301: EKSLVLKAEE KHMAALLVER SGIDLRSQVT VNGTCSISSS DVKFLLVDTV RAKVWAVQHL SFSMWDAQNK DLLKVFNIDG QVENRVDGTP AQGQQVEETK
0401: AKFFSTPKKD KSQGFLQRSR HAIMGAAGAV RRAATRSTGA FAEDPRKVEA IAIAADGSIW TGSMNGVIAQ WDGNGNRLRE VNHHQQAVLC FCTFGDRIYV
0501: GYSSGYIQIL DLGGKLVASW VSHNEPVIKL AAGGGFIFSL ATHGGVRGWY VTSPGPLDSV IRTDLSQKGN TYARQDSVKI LIGTWNVGEG RASRGALMSW
0601: LGSDVSDVGI VAVGLQEVDM GAGFLAMSTA KETVGVEGSV VGKWWIDAIG NALDERNTFE RMGSRQLAGL LISLWVRKDI RTHVGDLDVA AVPCGFGRAI
0701: GNKGGVGLRI RVYDRIMCFV NCHLAAHLEA VTRRNADFNH IYRSMVFSKG QSLYTVPAAG ASSSTQAQKN NTNTNIITEE EKSDLAAADF VAFFGDFNYR
0801: LFGITYDEAR DFISHRSFDW LREKDQLRAE MSEGKVFQGM REALITFPPT YKFEKNKPGL GGYDSGEKKR IPAWCDRVIF RDNQSTPFSE CNLQCPVVSC
0901: TVMYEACMDV TESDHKPVRC KLHANIAHTD KSVRRQELGK IIKSSEKLRS MFEELRYVPE TSVSTNSILL QSQDTFIFSI TNKSNSSRAL FNIVCKGQTV
1001: VRDDGGTFGL PRWLEVSPGA GMIKPDASVQ VKVHHEDSNT SDESFDGIQQ QNSSCEEACD KEVTLMVIIQ GSCSTRTTSH SIKVRYCFSA AKSVNLAYSK
1101: PKPNNATKNN QEGSTRYQPE NYRGGSTRRG
0101: RGEIAGHGGG GGADIEPLPE FMGAGGGVDV FKVPVRAAVN PGRPPCLEIR PHPLRETQTG KFLRNIACTE SQLWSGQENG VRFWNLEEAY EVGYGVGGQV
0201: RRGDEDTAPF HESVVISPTL CLMIDHGNRL VWSGHKDGKI RAWKMDHPVT NTADDSKPFK ERLSWQAHRG PVNYIVISSY GDMWSCSDGG VIKIWTFDSL
0301: EKSLVLKAEE KHMAALLVER SGIDLRSQVT VNGTCSISSS DVKFLLVDTV RAKVWAVQHL SFSMWDAQNK DLLKVFNIDG QVENRVDGTP AQGQQVEETK
0401: AKFFSTPKKD KSQGFLQRSR HAIMGAAGAV RRAATRSTGA FAEDPRKVEA IAIAADGSIW TGSMNGVIAQ WDGNGNRLRE VNHHQQAVLC FCTFGDRIYV
0501: GYSSGYIQIL DLGGKLVASW VSHNEPVIKL AAGGGFIFSL ATHGGVRGWY VTSPGPLDSV IRTDLSQKGN TYARQDSVKI LIGTWNVGEG RASRGALMSW
0601: LGSDVSDVGI VAVGLQEVDM GAGFLAMSTA KETVGVEGSV VGKWWIDAIG NALDERNTFE RMGSRQLAGL LISLWVRKDI RTHVGDLDVA AVPCGFGRAI
0701: GNKGGVGLRI RVYDRIMCFV NCHLAAHLEA VTRRNADFNH IYRSMVFSKG QSLYTVPAAG ASSSTQAQKN NTNTNIITEE EKSDLAAADF VAFFGDFNYR
0801: LFGITYDEAR DFISHRSFDW LREKDQLRAE MSEGKVFQGM REALITFPPT YKFEKNKPGL GGYDSGEKKR IPAWCDRVIF RDNQSTPFSE CNLQCPVVSC
0901: TVMYEACMDV TESDHKPVRC KLHANIAHTD KSVRRQELGK IIKSSEKLRS MFEELRYVPE TSVSTNSILL QSQDTFIFSI TNKSNSSRAL FNIVCKGQTV
1001: VRDDGGTFGL PRWLEVSPGA GMIKPDASVQ VKVHHEDSNT SDESFDGIQQ QNSSCEEACD KEVTLMVIIQ GSCSTRTTSH SIKVRYCFSA AKSVNLAYSK
1101: PKPNNATKNN QEGSTRYQPE NYRGGSTRRG
0001: MDSVIIEPDE REALASLVPA HPLPPRKTHS YVEQCEQKPH HPIRKYSLDE GSRSVTSDSE AVYFDSSDGE FSTEGVAIVD GRTSGERGNG EECGFVTPPS
0101: KPASQGGGND GGREDDIESL PEFIGAGGGL DVFKVPVRAA VNPGRPPCLE LRPHPLRETQ TGKFLRNIAC TESQLWAGQE NGVRFWNLEE AYEVGCGLGG
0201: QVRRGDEDTA PFHESVPTSP ALCLLVDHGN RLVWTGHKDG KIRAWKMNQP NTTTADDSKP FKERLSWQAH RGPVNYIVIS SYGDMWSCSD GGVIKIWTLD
0301: SLEKSLVLKL EEKHMAALLV ERSGIDLRSQ VTVNGTCSIS SSDVKFLLVD TVKAKVWAVQ HLSFSLWDAQ NKELLKVFNI DGQVENRVDM PPTQGQQVED
0401: TKAKFFSAPK KEKSQGFLQR SRHAIMGAAG AVRRAATRSA GAFAEDTRKV EAIAIAADGS IWTGSMNGVI AQWDGNGSRL REVNHHQQAV LCFCTFGDRI
0501: YVGYSSGYIQ VLDLGGKLIA SWVSHNEPVI KLAAGGGFIF SLATHGGVRG WYVTSPGPLD SLIRTELSQK EMAYARQDSV KILIGTWNVG EGRASRGALV
0601: SWLGSAVSDV GIVAIGLQEV DMGAGFLAMS TAKETVGVEG SAVGQWWLDA IGNALDERNT FERMGSRQLA GLLISLWVRK SIRTHVGDLD VAAVPCGFGR
0701: AIGNKGGVGL RIRVYDRIMC FVNCHLAAHL EAVTRRNADF NHIYRSMVFS KGQSVYTAAA AGASTSAQAL KNNPNTNNST EEEKSHLASA DLVAFFGDFN
0801: YRLFGITYDE ARDFISHRSF DWLREKDQLR QEMNEGKVFQ GMREALITFP PTYKFEKNKP GLGGYDSGEK KRIPAWCDRV IYRDNQSISY TECSLKCPVV
0901: SSTIMYEACM DVTESDHKPV RCKLHANIAH TDKSVRRQEL GKIVKSNEKL RAMFEELKSV PETSVSTNNI LLHSQDTFIF TIRNTSNSSR AIFNIVCKGQ
1001: TLVREDGEEP DNHSRGTFGL PRWLEVSPGA GIIKPDASLQ VKVHHEDSHN SEEFIDGIQQ NSLSEESSDK EVTLIIIVQG SCSTRTISHS IKVRHCSSAA
1101: KSLSLVHSKT TTMTKNLEGS TRYQTDANRG GSTRHRTDDS TRRG
0101: KPASQGGGND GGREDDIESL PEFIGAGGGL DVFKVPVRAA VNPGRPPCLE LRPHPLRETQ TGKFLRNIAC TESQLWAGQE NGVRFWNLEE AYEVGCGLGG
0201: QVRRGDEDTA PFHESVPTSP ALCLLVDHGN RLVWTGHKDG KIRAWKMNQP NTTTADDSKP FKERLSWQAH RGPVNYIVIS SYGDMWSCSD GGVIKIWTLD
0301: SLEKSLVLKL EEKHMAALLV ERSGIDLRSQ VTVNGTCSIS SSDVKFLLVD TVKAKVWAVQ HLSFSLWDAQ NKELLKVFNI DGQVENRVDM PPTQGQQVED
0401: TKAKFFSAPK KEKSQGFLQR SRHAIMGAAG AVRRAATRSA GAFAEDTRKV EAIAIAADGS IWTGSMNGVI AQWDGNGSRL REVNHHQQAV LCFCTFGDRI
0501: YVGYSSGYIQ VLDLGGKLIA SWVSHNEPVI KLAAGGGFIF SLATHGGVRG WYVTSPGPLD SLIRTELSQK EMAYARQDSV KILIGTWNVG EGRASRGALV
0601: SWLGSAVSDV GIVAIGLQEV DMGAGFLAMS TAKETVGVEG SAVGQWWLDA IGNALDERNT FERMGSRQLA GLLISLWVRK SIRTHVGDLD VAAVPCGFGR
0701: AIGNKGGVGL RIRVYDRIMC FVNCHLAAHL EAVTRRNADF NHIYRSMVFS KGQSVYTAAA AGASTSAQAL KNNPNTNNST EEEKSHLASA DLVAFFGDFN
0801: YRLFGITYDE ARDFISHRSF DWLREKDQLR QEMNEGKVFQ GMREALITFP PTYKFEKNKP GLGGYDSGEK KRIPAWCDRV IYRDNQSISY TECSLKCPVV
0901: SSTIMYEACM DVTESDHKPV RCKLHANIAH TDKSVRRQEL GKIVKSNEKL RAMFEELKSV PETSVSTNNI LLHSQDTFIF TIRNTSNSSR AIFNIVCKGQ
1001: TLVREDGEEP DNHSRGTFGL PRWLEVSPGA GIIKPDASLQ VKVHHEDSHN SEEFIDGIQQ NSLSEESSDK EVTLIIIVQG SCSTRTISHS IKVRHCSSAA
1101: KSLSLVHSKT TTMTKNLEGS TRYQTDANRG GSTRHRTDDS TRRG
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:UniProtKB/TrEMBL;Acc:F4IRT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.