Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G278100.1 | Wheat | nucleus | 96.39 | 99.24 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 93.6 | 96.21 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 93.6 | 90.7 |
| Os09t0500300-01 | Rice | cytosol | 72.19 | 87.91 |
| Zm00001d006063_P002 | Maize | cytosol | 80.07 | 82.29 |
| Zm00001d021014_P001 | Maize | cytosol | 79.49 | 82.12 |
| KXG35959 | Sorghum | cytosol | 79.74 | 81.82 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 65.71 | 69.17 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 52.83 | 63.08 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 34.04 | 62.59 |
| VIT_00s0220g00160.t01 | Wine grape | cytosol | 40.61 | 59.57 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 21.9 | 57.92 |
| GSMUA_Achr11P... | Banana | cytosol | 53.65 | 56.77 |
| CDY47263 | Canola | plastid | 43.89 | 56.08 |
| Bra015445.1-P | Field mustard | plastid | 43.81 | 56.03 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 46.84 | 55.12 |
| KRH01856 | Soybean | cytosol | 23.13 | 54.65 |
| PGSC0003DMT400070365 | Potato | cytosol | 11.48 | 52.83 |
| KRH51310 | Soybean | cytosol | 47.74 | 52.72 |
| CDY07455 | Canola | cytosol | 40.85 | 52.53 |
| CDY10132 | Canola | cytosol | 48.15 | 52.46 |
| KRH34234 | Soybean | cytosol | 47.33 | 52.45 |
| CDY10014 | Canola | cytosol, plastid | 46.43 | 52.26 |
| CDY39279 | Canola | cytosol | 41.35 | 51.96 |
| Solyc08g014580.2.1 | Tomato | nucleus | 49.06 | 51.64 |
| AT1G65580.1 | Thale cress | nucleus | 46.6 | 51.59 |
| CDY15548 | Canola | cytosol | 46.27 | 51.32 |
| Solyc12g019080.1.1 | Tomato | nucleus | 44.71 | 51.27 |
| CDX86567 | Canola | cytosol | 45.94 | 51.19 |
| Bra032456.1-P | Field mustard | cytosol | 47.01 | 51.12 |
| KRG92557 | Soybean | golgi, plasma membrane | 47.91 | 51.09 |
| Bra030617.1-P | Field mustard | cytosol | 47.66 | 51.05 |
| PGSC0003DMT400064953 | Potato | cytosol | 48.56 | 50.86 |
| Solyc11g008800.1.1 | Tomato | cytosol | 47.66 | 50.22 |
| Bra004120.1-P | Field mustard | nucleus | 46.1 | 50.13 |
| PGSC0003DMT400052499 | Potato | nucleus | 47.25 | 50.0 |
| AT1G05630.1 | Thale cress | cytosol | 47.91 | 49.91 |
| CDY06178 | Canola | cytosol | 46.68 | 49.78 |
| CDY34516 | Canola | cytosol | 45.37 | 48.94 |
| Bra005638.1-P | Field mustard | cytosol | 45.86 | 48.78 |
| CDY42072 | Canola | cytosol | 45.53 | 48.47 |
| KRH01854 | Soybean | cytosol | 24.61 | 48.47 |
| AT2G31830.2 | Thale cress | cytosol | 45.69 | 47.49 |
| TraesCS4D01G221700.1 | Wheat | cytosol | 41.84 | 47.35 |
| Solyc12g096660.1.1 | Tomato | cytosol | 46.27 | 47.32 |
| Bra000333.1-P | Field mustard | nucleus | 47.09 | 44.39 |
| CDX95575 | Canola | nucleus | 46.84 | 44.06 |
| AT2G43900.2 | Thale cress | nucleus | 48.4 | 43.77 |
| TraesCS4D01G069300.2 | Wheat | cytosol | 8.61 | 31.16 |
Protein Annotations
| MapMan:27.5.4.2 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0046856 |
| InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR036691 | PFAM:PF03372 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF145 |
| SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 | EnsemblPlantsGene:TraesCS5D01G285100 | EnsemblPlants:TraesCS5D01G285100.2 |
| InterPro:WD40_repeat | TIGR:cd09074 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:+:385943014..385948751
Molecular Weight (calculated)
133000.0 Da
IEP (calculated)
6.920
GRAVY (calculated)
-0.358
Length
1219 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPDDEALKE LAAASSRPPQ RRGISYSQPL SRGDTASARR AALRNLSLDD DHVLPASHSL SYAHHDSSAG VPAGYHPPLP PQQQHHHHPS ASYSSGPSSR
0101: RSVGGASDGS MTLERAMSEY GGGAGTLPEF VGAGGGKGIF RVPLRAAMHP HRPPPLEVRP HPLRETQAGS FLRTLASDPQ RRQLWAGAES GIRVWALDEV
0201: FAGWGAGARR GDEESAPFRE GVPAPPALCV AMDRANGLLW TGHKDGRIRS WRMDLETAAT APAPPPPGSG GEGSVGGSAH GGPNSAPVFR EALTWQAYGR
0301: TPVLSMAITS YGEHAIYLSS PHIVTMHFCC MCLPNVKNPS RCLNLAGEIW SGSEAGVIKA WPYDAIAKSL SLSPEERHMA ALLVERAYID LRNHCTVGNV
0401: CSLPASDVKY MLADHSRAKV WTLTSMTFAL WDARTRELLK VFGMDGQVES ARLDAPVMPE QPMEEVEVKV KPSKKDKSGG SLNFFQKSRN ALMGAADAVR
0501: RVATKGTFVE DNRRTGAVAQ ADDGAIWSGC TNGCIIQWDG NGNRMQEFQH HTSSVQCIKA LGDRVWVGYA SGTVQVMDVD GNLLAGWTGH SCPVIRMAIG
0601: GSYIYTLAHH GGIRGWPLTS PGPLDDVLRT ELANKELSYT RMEKINIMVG SWNVAQGKAT AESLKAWLGS VASDVGLVVV GLQEVEMGAG FLAISAAKET
0701: VGLEGSANGQ WWIDNIGKAL DEGTSFHRVG SRQLAALLIA AWARKSLKPY VGDVEAAAVP CGLGRAIGNK GGVGLRIRVY DRKMCFVSNH FAAHLEAVAR
0801: RNADFDHIYR TMAFNKPHGS TSSATSVQLH KTVNVNGNPV DEVRPDLADA DMVVFLGDFN YRLYGITYDE ARDMVSQRSF DWLREKDQLR AEMKAGKVFQ
0901: GMREGLIKFP PTYKFQKHAP GLGGYDSGEK KRIPAWCDRV LYRDSRAVSV AECSLECPVV AAITSYVAVM EVTESDHKPV RCTFSVDIAR VDELTRRQEY
1001: GEIIESNEEV RSMLKESCFV PDSTVSTEEI ILENQENIVF QITNNCETSK AAFEILCEGQ STKKDDGTKP EIIPRASFGF PLWLEVLPAN GLIKPGETVD
1101: ITIHHEDFYT QEEFVDGIPQ NWWCEDTRDK EAVIVVNITG STSTETKTHT INVRHRCPAT SAPPPINPPV TLTPPSNNMP SEAPSKRSSK KKEASRQQQQ
1201: DYAQFASTEV HDLYRMRCP
0101: RSVGGASDGS MTLERAMSEY GGGAGTLPEF VGAGGGKGIF RVPLRAAMHP HRPPPLEVRP HPLRETQAGS FLRTLASDPQ RRQLWAGAES GIRVWALDEV
0201: FAGWGAGARR GDEESAPFRE GVPAPPALCV AMDRANGLLW TGHKDGRIRS WRMDLETAAT APAPPPPGSG GEGSVGGSAH GGPNSAPVFR EALTWQAYGR
0301: TPVLSMAITS YGEHAIYLSS PHIVTMHFCC MCLPNVKNPS RCLNLAGEIW SGSEAGVIKA WPYDAIAKSL SLSPEERHMA ALLVERAYID LRNHCTVGNV
0401: CSLPASDVKY MLADHSRAKV WTLTSMTFAL WDARTRELLK VFGMDGQVES ARLDAPVMPE QPMEEVEVKV KPSKKDKSGG SLNFFQKSRN ALMGAADAVR
0501: RVATKGTFVE DNRRTGAVAQ ADDGAIWSGC TNGCIIQWDG NGNRMQEFQH HTSSVQCIKA LGDRVWVGYA SGTVQVMDVD GNLLAGWTGH SCPVIRMAIG
0601: GSYIYTLAHH GGIRGWPLTS PGPLDDVLRT ELANKELSYT RMEKINIMVG SWNVAQGKAT AESLKAWLGS VASDVGLVVV GLQEVEMGAG FLAISAAKET
0701: VGLEGSANGQ WWIDNIGKAL DEGTSFHRVG SRQLAALLIA AWARKSLKPY VGDVEAAAVP CGLGRAIGNK GGVGLRIRVY DRKMCFVSNH FAAHLEAVAR
0801: RNADFDHIYR TMAFNKPHGS TSSATSVQLH KTVNVNGNPV DEVRPDLADA DMVVFLGDFN YRLYGITYDE ARDMVSQRSF DWLREKDQLR AEMKAGKVFQ
0901: GMREGLIKFP PTYKFQKHAP GLGGYDSGEK KRIPAWCDRV LYRDSRAVSV AECSLECPVV AAITSYVAVM EVTESDHKPV RCTFSVDIAR VDELTRRQEY
1001: GEIIESNEEV RSMLKESCFV PDSTVSTEEI ILENQENIVF QITNNCETSK AAFEILCEGQ STKKDDGTKP EIIPRASFGF PLWLEVLPAN GLIKPGETVD
1101: ITIHHEDFYT QEEFVDGIPQ NWWCEDTRDK EAVIVVNITG STSTETKTHT INVRHRCPAT SAPPPINPPV TLTPPSNNMP SEAPSKRSSK KKEASRQQQQ
1201: DYAQFASTEV HDLYRMRCP
0001: MDSLIIEEED EEALATLVPV PPRRKTHSYS LQFDHKPHHQ IRKHSLDEVP RSATLASEAV YFDSSDDEFS TGGNITENAA DETNAGAEEY TIVNPPPNVG
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
Arabidopsis Description
AT5PTASE13Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT1G05630]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.