Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G082700.1 | Wheat | cytosol | 97.68 | 97.68 |
| TraesCS4B01G221300.1 | Wheat | cytosol | 97.59 | 97.59 |
| HORVU0Hr1G008620.1 | Barley | mitochondrion | 94.43 | 91.95 |
| Os02t0477700-01 | Rice | cytosol | 12.16 | 76.61 |
| OQU84937 | Sorghum | cytosol | 71.68 | 69.74 |
| Zm00001d016486_P001 | Maize | cytosol | 70.1 | 67.9 |
| GSMUA_Achr3P02440_001 | Banana | mitochondrion | 47.73 | 51.71 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 45.59 | 42.4 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 47.35 | 41.84 |
| TraesCS4D01G069300.2 | Wheat | cytosol | 8.82 | 28.19 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0046856 | InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR036691 | PFAM:PF03372 |
| PANTHER:PTHR11200 | PANTHER:PTHR11200:SF137 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 |
| EnsemblPlantsGene:TraesCS4D01G221700 | EnsemblPlants:TraesCS4D01G221700.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | TIGR:cd09074 | SEG:seg |
Description
No Description!
Coordinates
chr4D:-:378754207..378764338
Molecular Weight (calculated)
116885.0 Da
IEP (calculated)
7.801
GRAVY (calculated)
-0.244
Length
1077 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADPGDTATP AAAVSSPWDD VPDDFFLSAS ISPPTPPPAP APIPSTSPPA PSALRSASLP VTSIPPASAS ASFSGSLHRA IAPQPIHPSH SLPAFSAASL
0101: PAVADVCPPP PGPHHSNSLS EFAASASQSR VHRPPPRAAV RADRPPPLEL RPRPPRESQS GIALCALTCC AAPGAGTSTH LWAAGEAGVR VWDVADAFRS
0201: PTSPRRWGDE ASAPFRESRK TPPAICLVAD PGRGLVWSGH TNGRIMGWRA DPGSEAGERI GWDAHRGPVF AMVISPYGDL WSGSEGGIIK VWNGEAIEKS
0301: LALEREEKCK VSLLVERSFI DLWTMVSDGG ACPLPSVDVK LLLSDNSRSK VWSAGYLSFA LWDSRTKELL KVVNVDGQVD TRFDVLSAQD PYGYETKQNL
0401: FSSPKKEKAR SPVNFFQRSR NALMGAADAV RRVAAKAGFG DDTRRIEALV MSMDGMIWTG SVNGSVAQWD GSGNRLQEFQ HHSSSVQSIL NFGTRLWVGY
0501: MDGNIQLLDL DGNLLGGWIA HSSPILSMAV GSSYIFTLAG HGGVRGWNLS SPGPADSILR SELTEKEISY KNIEYMKVLV CSWNVGQEKA SYESLRAWLK
0601: FPTQEVGVVV VGLQEVEMGA GFLAMSAAKE TVGLEGSPNG EWWLDAIGQI LKGHSFERVG SRQMAGLLTA VWVRTNLKHF VSDIDNAAVA CGLGRAIGNK
0701: GAVGLRMRIH DRSICFVNCH FAAHMEAVSR RNEDFDHVFR TMTFATPSSG LLTASISGSA GQLLQANGSR MPELSDTDMI VFLGDFNYRL YDISYEEAMG
0801: LVSRRRFDWL RKNDQLRAEM RSGRVFQGLR EGDFQFPPTY KFEKHKAGLS GYDCSEKKRI PAWCDRVLYR DSRASSGTEC SLDCPVVCSV SLYDSCMEAT
0901: DSDHKPVKCL FNLDVARVEK QTMRQKYGEI MSSNKKVLHL LQGLKAFPEA NVSTNDIILQ DQTPYIFKLQ NRSTEDRACF EITGQAPSSS GTDSAGFPTW
1001: LKVSPATGII CPGQTVEVTL QHGDLRGTSW NNLSGANQEK AAQLSVKITG VCSTVAKCYG VRVQCQKGRS AFPFKRF
0101: PAVADVCPPP PGPHHSNSLS EFAASASQSR VHRPPPRAAV RADRPPPLEL RPRPPRESQS GIALCALTCC AAPGAGTSTH LWAAGEAGVR VWDVADAFRS
0201: PTSPRRWGDE ASAPFRESRK TPPAICLVAD PGRGLVWSGH TNGRIMGWRA DPGSEAGERI GWDAHRGPVF AMVISPYGDL WSGSEGGIIK VWNGEAIEKS
0301: LALEREEKCK VSLLVERSFI DLWTMVSDGG ACPLPSVDVK LLLSDNSRSK VWSAGYLSFA LWDSRTKELL KVVNVDGQVD TRFDVLSAQD PYGYETKQNL
0401: FSSPKKEKAR SPVNFFQRSR NALMGAADAV RRVAAKAGFG DDTRRIEALV MSMDGMIWTG SVNGSVAQWD GSGNRLQEFQ HHSSSVQSIL NFGTRLWVGY
0501: MDGNIQLLDL DGNLLGGWIA HSSPILSMAV GSSYIFTLAG HGGVRGWNLS SPGPADSILR SELTEKEISY KNIEYMKVLV CSWNVGQEKA SYESLRAWLK
0601: FPTQEVGVVV VGLQEVEMGA GFLAMSAAKE TVGLEGSPNG EWWLDAIGQI LKGHSFERVG SRQMAGLLTA VWVRTNLKHF VSDIDNAAVA CGLGRAIGNK
0701: GAVGLRMRIH DRSICFVNCH FAAHMEAVSR RNEDFDHVFR TMTFATPSSG LLTASISGSA GQLLQANGSR MPELSDTDMI VFLGDFNYRL YDISYEEAMG
0801: LVSRRRFDWL RKNDQLRAEM RSGRVFQGLR EGDFQFPPTY KFEKHKAGLS GYDCSEKKRI PAWCDRVLYR DSRASSGTEC SLDCPVVCSV SLYDSCMEAT
0901: DSDHKPVKCL FNLDVARVEK QTMRQKYGEI MSSNKKVLHL LQGLKAFPEA NVSTNDIILQ DQTPYIFKLQ NRSTEDRACF EITGQAPSSS GTDSAGFPTW
1001: LKVSPATGII CPGQTVEVTL QHGDLRGTSW NNLSGANQEK AAQLSVKITG VCSTVAKCYG VRVQCQKGRS AFPFKRF
0001: MDSLIIEEED EEALATLVPV PPRRKTHSYS LQFDHKPHHQ IRKHSLDEVP RSATLASEAV YFDSSDDEFS TGGNITENAA DETNAGAEEY TIVNPPPNVG
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
Arabidopsis Description
AT5PTASE13Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT1G05630]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.