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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 1
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016486_P001 Maize cytosol 88.62 88.22
Os02t0477700-01 Rice cytosol 12.2 78.95
TraesCS4A01G082700.1 Wheat cytosol 69.92 71.87
TraesCS4D01G221700.1 Wheat cytosol 69.74 71.68
TraesCS4B01G221300.1 Wheat cytosol 69.65 71.59
HORVU0Hr1G008620.1 Barley mitochondrion 69.02 69.08
GSMUA_Achr3P02440_001 Banana mitochondrion 47.52 52.92
EES15333 Sorghum cytosol 46.7 45.15
KXG35959 Sorghum cytosol 45.89 42.76
EER93785 Sorghum cytosol 9.58 31.36
Protein Annotations
Gene3D:2.130.10.10MapMan:27.5.4.2Gene3D:3.60.10.10UniProt:A0A1Z5RMN3InterPro:Endo/exonu/phosph_ase_sfInterPro:Endo/exonuclease/phosphatase
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0005515GO:GO:0006629GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016787GO:GO:0046856InterPro:IPPcInterPro:IPR001680
InterPro:IPR015943InterPro:IPR036691EnsemblPlants:OQU84937ProteinID:OQU84937ProteinID:OQU84937.1PFAM:PF03372
PANTHER:PTHR11200PANTHER:PTHR11200:SF137SMART:SM00128SMART:SM00320EnsemblPlantsGene:SORBI_3004G145500SUPFAM:SSF101908
SUPFAM:SSF56219UniParc:UPI000B425734InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatSEG:seg:
Description
hypothetical protein
Coordinates
chr4:+:44836216..44844772
Molecular Weight (calculated)
120037.0 Da
IEP (calculated)
7.218
GRAVY (calculated)
-0.279
Length
1107 amino acids
Sequence
(BLAST)
0001: MADPGDTTNP FASPAGAASS PWDDLPDDFF LSTSISSPSP PPPPAPIPST SPRLATPHRS ASLPPASTPS AATSASVSAS FSDPRPRAAP ASHQHQPQLL
0101: HPSHSLPAFP AAASRSPAAA VQVWPPPPGP HHSGSIPEFA AAPASGAHLP PARAAVRADR PPPLDLRPRP PRESQAGVAL RALACCRDAS RAEAGVGARL
0201: WAAGEAGVRA WDLADAFRSP ASQQRWGDEA SAPFQESRRT SPALCLTADP GRGVVWSGHS DGRIMGWTAY PGPEAGECLS WEAHRGPVFA LAVSPYGDLW
0301: SGSEGGAIKV WYGEPIQKSL ISQTEEKRKT SFLVERSSID LRDMVSDGGA CPLPAVDVKL LLSDNSRSKV WSAGYLSFAL WDSRTKELLK VVNIDGQVDT
0401: RFDILSSQDT YSYETKQTLF SPWKEKARSP VGFLQRSRNA LLGAADVVRR VAVKAGFGDD TRRIEAFAMS TDGMIWTGSA NGSLAQWDGS GNRLQEFLHH
0501: SSSVQCIYNF GTRIWVGYMD GNIQLLDLGG NLLGGWIAHS SPILSMAVGG SYIFTLAGHG GIRGWNLSSP GPLDSILRSE LIEKDSSYKS FEYMKVLVGS
0601: WNVGQEKASY ESLRAWLKLP TPEVGVVVIG LQEVDMGAGF LAMSAAKETV GLEGSPNGEW WLDVIGQILK GHSFVRVGSR QMAGLLIAVW VRINLKQFIG
0701: DIDNAAVACG LGRTIGNKGA VGLRMRIHGR SICFVNCHFA AHMEAVSRRN EDFDHVFRSM TFSSPSNGLL TTSVSGSAAQ LLRGANGSRL PELSDTDMIV
0801: FLGDFNYRLS DISFDEAMGL VSRRCFDWLR ENDQLRGEMK SGRVFQGLRE GEFKFPPTYK FEKHIAGLSG YDSSEKRRIP AWCDRILYRD SRTSSQTECS
0901: LECPVVCSIS LYDSCMEATD SDHKPVKCVF NLDIARVDKQ TMRQKYGELM TSNKEVLDSL QGLEPFPEVN ISTNNIILQD QNPSVVKLHN RSTKELACFE
1001: IIGQTSNSSG TSGFPSWLKV SPAVGIISPG QSVEVALQHG QIRSQDYLTG TSGNSSGDEQ EKVTTLLVTI TGVDSTAGRY YKIQVQHRSR RETFPSRGYN
1101: FADRFFG
Best Arabidopsis Sequence Match ( AT1G65580.1 )
(BLAST)
0001: MEDRQNDQND DVFSFFSPSF SAATPSTLFN RSAYSSSSSS GDDESQPSVD DSNKRIDYMI QFLDRRLSED GNHDGIGDGN GSDSLPEFVG KCGESGIFKV
0101: PIRSAVHPNR PPSLDVRPHP LRETQIGRFL RTMTSTERQL WTGGEDGALR VWEFSELYGS GRGLEVEDTA PYKESLGNEF GSAAVVCMIG DEGSRVVWSG
0201: HRDGRIRCWR LRGDHGIEEA LSWQAHRGPV LSIAISAYGD IWSGSEGGAL KVWPWDGALG KSLSLKMEER HMAALAVERS YIDPRNMVSA NGFANTLTSD
0301: VTFLVSDHTR ARVWSASPLT FAIWDARTRD LIKVFNIDGQ LENRPENSVY PDFGSEEEGK MKVTASKKEK AQSSLGFFQR SRNAIMGAAD AVRRAATKGG
0401: FCDDSRKTEA IVISVDGMIW TGSSNGILMR WDGNGNCLQE FAYESSGILC MFTFCSRLWV GYSNGTVQVW DLEGKLLGGW VAHSGPVIKM AIGAGYLFTL
0501: ANHGGIRGWN VTSPGPLDNV LRAELAGKEF LYSRIENLKI LAGTWNVGEG RASTDSLVSW LGCAATGVEI VVVGLQEVEM GAGVLAMSAA KETVGLEGSP
0601: LGQWWLDMIG KTLDEGSSFV RVGSRQLAGL LICVWVRHDL KPHVGDVDAA AVPCGFGRAI GNKGAVGVRL RMYDRVLCFV NCHFAAHLEA VNRRNADFDH
0701: VYRTMTFSRQ SSSLNAGVAG ASFGVTMPRG GNALGVNTIE ARPELSEADM VIFLGDFNYR LDDITYDETR DFISQRCFDW LREKDQLHTE MEAGNVFQGM
0801: REAIIRFPPT YKFERHQAGL AGYDSGEKKR IPAWCDRILY RDNKKHLGAE CSLDCPVVSS ISQYDACMEV TDSDHKPVRC VFSVKIARVD ESVRRQEYGN
0901: IINSNKKIKV LLGELSKVPE TIVSTNNIIL QNQDSTILRI TNKSEKNIAF FKIICEGQSK IEEDGQAHDH RARGSFGFPQ WLEVSPGTGT IKPNQIAEVS
1001: VHLEDFPTVE EFVDGVAQNS WCEDTRDKEV ILVLVVHGRF STETRKHRIR VRHCPRGGPA KNHFNDGTKT SGQINALHRS DYHQLSNTLD VVEQLKNLHS
1101: P
Arabidopsis Description
IP5P15Type II inositol polyphosphate 5-phosphatase 15 [Source:UniProtKB/Swiss-Prot;Acc:Q84W55]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.