Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 31.09 | 85.99 |
| Zm00001d031554_P003 | Maize | nucleus | 82.79 | 84.87 |
| Zm00001d049785_P003 | Maize | cytosol | 82.79 | 83.6 |
| Zm00001d028271_P001 | Maize | cytosol | 19.91 | 80.57 |
| Os08t0524100-01 | Rice | nucleus | 71.62 | 74.07 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 72.75 | 72.12 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 72.93 | 72.11 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 72.66 | 71.85 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 72.05 | 71.12 |
| KXG35959 | Sorghum | cytosol | 69.26 | 66.75 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 56.68 | 63.57 |
| VIT_00s0220g00160.t01 | Wine grape | cytosol | 44.89 | 61.85 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 35.28 | 60.94 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 23.93 | 59.44 |
| PGSC0003DMT400070365 | Potato | cytosol | 13.19 | 56.98 |
| GSMUA_Achr11P... | Banana | cytosol | 56.68 | 56.34 |
| KRH01856 | Soybean | cytosol | 24.54 | 54.46 |
| CDY47263 | Canola | plastid | 45.33 | 54.4 |
| Bra015445.1-P | Field mustard | plastid | 45.24 | 54.35 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 49.08 | 54.25 |
| CDY39279 | Canola | cytosol | 45.94 | 54.23 |
| CDY07455 | Canola | cytosol | 44.8 | 54.11 |
| AT1G65580.1 | Thale cress | nucleus | 51.79 | 53.86 |
| KRH34234 | Soybean | cytosol | 51.0 | 53.09 |
| KRH51310 | Soybean | cytosol | 50.92 | 52.81 |
| CDY10132 | Canola | cytosol | 50.39 | 51.56 |
| KRG92557 | Soybean | golgi, plasma membrane | 51.18 | 51.27 |
| Bra004120.1-P | Field mustard | nucleus | 50.13 | 51.2 |
| Solyc11g008800.1.1 | Tomato | cytosol | 51.62 | 51.08 |
| CDY10014 | Canola | cytosol, plastid | 48.3 | 51.06 |
| Solyc12g019080.1.1 | Tomato | nucleus | 47.16 | 50.8 |
| Solyc08g014580.2.1 | Tomato | nucleus | 50.39 | 49.83 |
| PGSC0003DMT400064953 | Potato | cytosol | 50.39 | 49.57 |
| PGSC0003DMT400052499 | Potato | nucleus | 49.87 | 49.57 |
| CDX86567 | Canola | cytosol | 47.34 | 49.54 |
| CDY15548 | Canola | cytosol | 47.16 | 49.14 |
| Bra030617.1-P | Field mustard | cytosol | 48.82 | 49.12 |
| Bra032456.1-P | Field mustard | cytosol | 47.6 | 48.62 |
| AT1G05630.1 | Thale cress | cytosol | 49.61 | 48.55 |
| KRH01854 | Soybean | cytosol | 26.2 | 48.47 |
| CDY06178 | Canola | cytosol | 48.21 | 48.29 |
| CDY34516 | Canola | cytosol | 47.6 | 48.23 |
| Bra005638.1-P | Field mustard | cytosol | 47.95 | 47.91 |
| CDY42072 | Canola | cytosol | 47.86 | 47.86 |
| AT2G31830.2 | Thale cress | cytosol | 48.47 | 47.31 |
| OQU84937 | Sorghum | cytosol | 45.15 | 46.7 |
| Solyc12g096660.1.1 | Tomato | cytosol | 48.38 | 46.48 |
| Bra000333.1-P | Field mustard | nucleus | 50.92 | 45.09 |
| CDX95575 | Canola | nucleus | 50.74 | 44.83 |
| AT2G43900.2 | Thale cress | nucleus | 52.14 | 44.29 |
| EER93785 | Sorghum | cytosol | 9.69 | 32.84 |
Protein Annotations
| MapMan:27.5.4.2 | Gene3D:3.60.10.10 | EntrezGene:8063976 | UniProt:C5YI66 | ncoils:Coil | EnsemblPlants:EES15333 |
| ProteinID:EES15333 | ProteinID:EES15333.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0046856 | InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR036691 | PFAM:PF03372 |
| PANTHER:PTHR11200 | PANTHER:PTHR11200:SF145 | SMART:SM00128 | SMART:SM00320 | EnsemblPlantsGene:SORBI_3007G198300 | SUPFAM:SSF50978 |
| SUPFAM:SSF56219 | unigene:Sbi.12584 | UniParc:UPI0001A87852 | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | RefSeq:XP_002445838.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:-:62965952..62973989
Molecular Weight (calculated)
125230.0 Da
IEP (calculated)
6.438
GRAVY (calculated)
-0.273
Length
1145 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDPDDEPSAQ RKAVDLHQSR DTEPVSAPAC TRRAAPRVLS YGGDDPVASA SASTQRCASF PQRHGHGETA LATAASFAAW VDGGSASPSP SAVAAALERA
0101: MSQYGGALPE FVGAGGGEGI FRVPLRAAMH PARPPALEVR PHPLRETQVG AFLRTLACDP RRRQLWAGAE SGVRVWDLHE AFSGWRPGAG PRRRGDEDAA
0201: PFRESVPVPP ALCAAVDGAS GMVWTGHRDG RIRAWRMDHA APSPAGGDTA GTTPMFKEAL AWQAYSRTPV LAIVVTSYGE IWSGSEGGVI KAWPWDAIAK
0301: SLSFTSGENH MAASLVEKSY IDLRNHATVG NMCSLPAADV KHMLSDRCRA KVWSLTSMTF ALWDAKTREL LKVFGIDGQV DLARPEAPVM PEQFIEEEIK
0401: VKPTKKEKPQ GSFSFFQKSR NALMGAADAV RRVATKGTLV EDNRRTEAVA QAMNGTIWSG CTDGSIIVWD GNGNRLQEFH YHSSSVQCIK TLGKRVWVGY
0501: ASGTIQVMDV EGNLLAGWIG HSCPVINMAI GDSYIFSLAH HGGIRGWPLS SPSPLDDILR YELASRELSY TRLENVKILV GTWNVAQEKA SPEALRSWLG
0601: GAFFDVGLVV VGLQEVEMGA GVLAMAAAKE SVGLEGSANG QWWIDSIGKT LDEGISFHRV GSRQLAGLLI AAWASNDLKP HVGDVDAAAV PCGFGRAIGN
0701: KGGVGLRIRV FDRRICFVNN HFAAHQENVS RRNADFDHIY RTMTFNKPHG STASATSVQL HKAVSANENQ ADEDTPELAE ADMVVFLGDF NYRLNGITYD
0801: EARDMVSQRS FDWLRERDQL RAEMKAGNVF QGMREGPIKF PPTYKFQRHQ LGLSGYDSGE KKRIPAWCDR ILYRDSRSVS IAECSLECPV VAAITAYEAC
0901: MDVTDSDHKP VRCIFSVDIA RVDELIRRQE FEKIIESNKK VCSLLRELHF VPDTIVSTNN IILENQDDVI LRITNNCETS KAAFEILCEG QSIRKQDGTK
1001: SELLLRASFG FPLWLEVQPS IGLIEPGETM EVAVHHEDFF TQEEFVDGVQ QNWWCEATRD MEVVLSVNVT GSSSTEAVTH RITVRHCCPV PSAPPPVNPH
1101: SISDSPSDAE SGSKNNQLNH LLRSDFAKFG SSEVHDLCGV RKRSL
0101: MSQYGGALPE FVGAGGGEGI FRVPLRAAMH PARPPALEVR PHPLRETQVG AFLRTLACDP RRRQLWAGAE SGVRVWDLHE AFSGWRPGAG PRRRGDEDAA
0201: PFRESVPVPP ALCAAVDGAS GMVWTGHRDG RIRAWRMDHA APSPAGGDTA GTTPMFKEAL AWQAYSRTPV LAIVVTSYGE IWSGSEGGVI KAWPWDAIAK
0301: SLSFTSGENH MAASLVEKSY IDLRNHATVG NMCSLPAADV KHMLSDRCRA KVWSLTSMTF ALWDAKTREL LKVFGIDGQV DLARPEAPVM PEQFIEEEIK
0401: VKPTKKEKPQ GSFSFFQKSR NALMGAADAV RRVATKGTLV EDNRRTEAVA QAMNGTIWSG CTDGSIIVWD GNGNRLQEFH YHSSSVQCIK TLGKRVWVGY
0501: ASGTIQVMDV EGNLLAGWIG HSCPVINMAI GDSYIFSLAH HGGIRGWPLS SPSPLDDILR YELASRELSY TRLENVKILV GTWNVAQEKA SPEALRSWLG
0601: GAFFDVGLVV VGLQEVEMGA GVLAMAAAKE SVGLEGSANG QWWIDSIGKT LDEGISFHRV GSRQLAGLLI AAWASNDLKP HVGDVDAAAV PCGFGRAIGN
0701: KGGVGLRIRV FDRRICFVNN HFAAHQENVS RRNADFDHIY RTMTFNKPHG STASATSVQL HKAVSANENQ ADEDTPELAE ADMVVFLGDF NYRLNGITYD
0801: EARDMVSQRS FDWLRERDQL RAEMKAGNVF QGMREGPIKF PPTYKFQRHQ LGLSGYDSGE KKRIPAWCDR ILYRDSRSVS IAECSLECPV VAAITAYEAC
0901: MDVTDSDHKP VRCIFSVDIA RVDELIRRQE FEKIIESNKK VCSLLRELHF VPDTIVSTNN IILENQDDVI LRITNNCETS KAAFEILCEG QSIRKQDGTK
1001: SELLLRASFG FPLWLEVQPS IGLIEPGETM EVAVHHEDFF TQEEFVDGVQ QNWWCEATRD MEVVLSVNVT GSSSTEAVTH RITVRHCCPV PSAPPPVNPH
1101: SISDSPSDAE SGSKNNQLNH LLRSDFAKFG SSEVHDLCGV RKRSL
0001: MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT2G43900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.