Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032456.1-P | Field mustard | cytosol | 86.96 | 88.67 |
| CDY10014 | Canola | cytosol, plastid | 83.81 | 88.46 |
| CDY47263 | Canola | plastid | 67.02 | 80.29 |
| AT1G05630.1 | Thale cress | cytosol | 78.65 | 76.84 |
| CDY10132 | Canola | cytosol | 74.02 | 75.6 |
| CDX86567 | Canola | cytosol | 72.09 | 75.32 |
| CDY15548 | Canola | cytosol | 72.18 | 75.07 |
| CDY34516 | Canola | cytosol | 66.4 | 67.17 |
| CDY42072 | Canola | cytosol | 66.23 | 66.11 |
| KRH01856 | Soybean | cytosol | 29.66 | 65.7 |
| KRH51310 | Soybean | cytosol | 60.37 | 62.5 |
| KRH01854 | Soybean | cytosol | 32.81 | 60.58 |
| Solyc08g014580.2.1 | Tomato | nucleus | 57.92 | 57.17 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 51.71 | 57.05 |
| PGSC0003DMT400064953 | Potato | cytosol | 57.66 | 56.62 |
| Solyc12g019080.1.1 | Tomato | nucleus | 52.32 | 56.26 |
| PGSC0003DMT400052499 | Potato | nucleus | 56.08 | 55.64 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 48.91 | 54.75 |
| Zm00001d028271_P001 | Maize | cytosol | 13.3 | 53.71 |
| CDX95575 | Canola | nucleus | 60.54 | 53.4 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 30.53 | 52.64 |
| CDY07455 | Canola | cytosol | 43.39 | 52.32 |
| Solyc12g096660.1.1 | Tomato | cytosol | 53.98 | 51.76 |
| Os09t0500300-01 | Rice | cytosol | 45.23 | 51.65 |
| CDY39279 | Canola | cytosol | 43.04 | 50.72 |
| Os08t0524100-01 | Rice | nucleus | 49.08 | 50.68 |
| GSMUA_Achr11P... | Banana | cytosol | 50.22 | 49.83 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 18.02 | 49.76 |
| KXG35959 | Sorghum | cytosol | 50.13 | 48.23 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 49.96 | 48.23 |
| EES15333 | Sorghum | cytosol | 48.29 | 48.21 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 49.87 | 48.06 |
| Zm00001d006063_P002 | Maize | cytosol | 49.87 | 48.06 |
| Zm00001d021014_P001 | Maize | cytosol | 49.61 | 48.05 |
| Zm00001d031554_P003 | Maize | nucleus | 46.63 | 47.72 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 19.16 | 47.51 |
| Zm00001d049785_P003 | Maize | cytosol | 46.98 | 47.35 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 47.94 | 47.32 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 47.77 | 47.27 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 47.77 | 47.15 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 47.59 | 46.9 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 49.78 | 46.68 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 49.87 | 45.31 |
| CDY06733 | Canola | cytosol | 8.14 | 28.27 |
| CDY17072 | Canola | cytosol | 8.05 | 27.96 |
Protein Annotations
| Gene3D:2.130.10.10 | Gene3D:2.60.40.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | GO:A0A078F358 | EnsemblPlants:CDY06178 |
| ProteinID:CDY06178 | ProteinID:CDY06178.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0046856 |
| EnsemblPlantsGene:GSBRNA2T00122075001 | InterPro:IPPc | InterPro:IPR000535 | InterPro:IPR001680 | InterPro:IPR013783 | InterPro:IPR015943 |
| InterPro:IPR036691 | InterPro:Ig-like_fold | InterPro:MSP_dom | PFAM:PF03372 | PFscan:PS50202 | PANTHER:PTHR11200 |
| PANTHER:PTHR11200:SF137 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 | UniParc:UPI0004EF42A6 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | SEG:seg | : | : | : |
Description
BnaA09g50250D
Coordinates
chrLK031968:+:139407..146061
Molecular Weight (calculated)
125745.0 Da
IEP (calculated)
5.983
GRAVY (calculated)
-0.255
Length
1143 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDTLTIEGED EAALASLVPA PPHRKTQSFS HQFDLKPHPQ IRRSRKHSLD EIPQSAALAA EAAVYFDSSD DEFSTGGLVV NGDNVCDGTV TGEDYAVVTP
0101: PPDAVVGDDD VKPLPEFIGA GGGAGIFKVP VRAAVHPGRP PCLELRPHPQ RETQTGKFLR SIACTETQLW AGQENGVRFW NLDDVYEPAS LIEGQVRRGD
0201: EDTSPFHESV ITSPTLCLLA DQSNKLMWSG HKDGKIRAWK MDPPPCGSDD DLNPFKERIS WLAHRGPVNS IVISSYGDMW SCSEGGVIKI WPWESLEKSL
0301: LLKPEEKHMA ALLIERSPID LRSQVTVNGT CSISSSEVKY LLNDSVRAKV WAVQSLSFSI WDARSKDLLK VLDVEGQAEC RADMPPLHGQ QGDHETRVKF
0401: PTPSKKEKSP GFLQRSRNAI MGAAGAVRRV ATRSAGGFVV EDTRKTEAII LAVDGTIWTG NMSGLIVQWD GDGTRLRYVN HHHRAVMCFC TFGDRIYVGY
0501: ASGYIQVLDL DGDLVSSWVS HNEPVIKLAA GGGFVFSLAT HGGVRGWYVA SPGPLDNIIR TELSQKETLY ARQDSVRVLI GTWNVGQGRA SHGALMSWLG
0601: SVTSDVGIVV VGLQEVDMGA GFLAMSAAKE TVGLEGSVAG QWWIDAIGKA LDEKKTFERM GSRQLAGLLI SLWARKEIRT HVGDLDVAAV PCGFGRAIGN
0701: KGGVGLRIRV YDRTMCFVNC HLAAHLEAVN RRNADFNHIF RLMVFSRGQN LSNAAADMVL FLFLSCSLGF STYLFCLLYS SGLPWALSLA AGASTAAYTL
0801: KTTTNPSPGA EEVKSDLAAA DMIAFCGDFN YRLYGITYDE ARDFITQRSF DWLREMDQLR QEMKLGKVFQ GMREALITFP PTYKFERNRS GLGGYDSGEK
0901: KRIPAWCDRV IYRDTQSTPF SESNLQCPVV SSVIMYEACM DVTESDHKPV RCKIHATIAH VDKSVRRQEL GKIIKSNEEI TSIFEDLKHV PETTVSTNNI
1001: VLQSQDTETL TITNNSTTSK AIFSILCEEA EYNPRGSFGL PRWLEVSPAS GIIKPEEAVE VKVHHEDSHT VGEYVDGIPQ SEDTRDKEAI LMVNIRGSCS
1101: TTWTSHSIKV RHCFSAGVCL LESKPTNPTE NLDGSPREDG EEH
0101: PPDAVVGDDD VKPLPEFIGA GGGAGIFKVP VRAAVHPGRP PCLELRPHPQ RETQTGKFLR SIACTETQLW AGQENGVRFW NLDDVYEPAS LIEGQVRRGD
0201: EDTSPFHESV ITSPTLCLLA DQSNKLMWSG HKDGKIRAWK MDPPPCGSDD DLNPFKERIS WLAHRGPVNS IVISSYGDMW SCSEGGVIKI WPWESLEKSL
0301: LLKPEEKHMA ALLIERSPID LRSQVTVNGT CSISSSEVKY LLNDSVRAKV WAVQSLSFSI WDARSKDLLK VLDVEGQAEC RADMPPLHGQ QGDHETRVKF
0401: PTPSKKEKSP GFLQRSRNAI MGAAGAVRRV ATRSAGGFVV EDTRKTEAII LAVDGTIWTG NMSGLIVQWD GDGTRLRYVN HHHRAVMCFC TFGDRIYVGY
0501: ASGYIQVLDL DGDLVSSWVS HNEPVIKLAA GGGFVFSLAT HGGVRGWYVA SPGPLDNIIR TELSQKETLY ARQDSVRVLI GTWNVGQGRA SHGALMSWLG
0601: SVTSDVGIVV VGLQEVDMGA GFLAMSAAKE TVGLEGSVAG QWWIDAIGKA LDEKKTFERM GSRQLAGLLI SLWARKEIRT HVGDLDVAAV PCGFGRAIGN
0701: KGGVGLRIRV YDRTMCFVNC HLAAHLEAVN RRNADFNHIF RLMVFSRGQN LSNAAADMVL FLFLSCSLGF STYLFCLLYS SGLPWALSLA AGASTAAYTL
0801: KTTTNPSPGA EEVKSDLAAA DMIAFCGDFN YRLYGITYDE ARDFITQRSF DWLREMDQLR QEMKLGKVFQ GMREALITFP PTYKFERNRS GLGGYDSGEK
0901: KRIPAWCDRV IYRDTQSTPF SESNLQCPVV SSVIMYEACM DVTESDHKPV RCKIHATIAH VDKSVRRQEL GKIIKSNEEI TSIFEDLKHV PETTVSTNNI
1001: VLQSQDTETL TITNNSTTSK AIFSILCEEA EYNPRGSFGL PRWLEVSPAS GIIKPEEAVE VKVHHEDSHT VGEYVDGIPQ SEDTRDKEAI LMVNIRGSCS
1101: TTWTSHSIKV RHCFSAGVCL LESKPTNPTE NLDGSPREDG EEH
0001: MDSLIIEEED EEALATLVPV PPRRKTHSYS LQFDHKPHHQ IRKHSLDEVP RSATLASEAV YFDSSDDEFS TGGNITENAA DETNAGAEEY TIVNPPPNVG
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
Arabidopsis Description
AT5PTASE13Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT1G05630]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.