Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015445.1-P | Field mustard | plastid | 70.51 | 86.57 |
| CDY47263 | Canola | plastid | 70.51 | 86.48 |
| CDX86567 | Canola | cytosol | 80.77 | 86.38 |
| Bra030617.1-P | Field mustard | cytosol | 83.68 | 86.03 |
| CDY15548 | Canola | cytosol | 79.49 | 84.62 |
| CDY10132 | Canola | cytosol | 78.97 | 82.57 |
| Bra032456.1-P | Field mustard | cytosol | 75.73 | 79.04 |
| CDY06178 | Canola | cytosol | 76.84 | 78.65 |
| CDY10014 | Canola | cytosol, plastid | 72.73 | 78.58 |
| AT2G31830.2 | Thale cress | cytosol | 70.6 | 70.42 |
| KRH01856 | Soybean | cytosol | 30.17 | 68.41 |
| KRH51310 | Soybean | cytosol | 60.43 | 64.04 |
| KRH01854 | Soybean | cytosol | 33.16 | 62.68 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 53.08 | 59.94 |
| Solyc08g014580.2.1 | Tomato | nucleus | 58.46 | 59.07 |
| Solyc12g019080.1.1 | Tomato | nucleus | 53.59 | 58.98 |
| PGSC0003DMT400064953 | Potato | cytosol | 57.86 | 58.16 |
| PGSC0003DMT400052499 | Potato | nucleus | 56.5 | 57.38 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 50.0 | 57.3 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 31.71 | 55.96 |
| Zm00001d028271_P001 | Maize | cytosol | 13.5 | 55.83 |
| Solyc12g096660.1.1 | Tomato | cytosol | 54.53 | 53.52 |
| AT2G43900.2 | Thale cress | nucleus | 61.62 | 53.49 |
| AT1G65580.1 | Thale cress | nucleus | 50.09 | 53.22 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 18.55 | 52.42 |
| Os09t0500300-01 | Rice | cytosol | 44.7 | 52.25 |
| Os08t0524100-01 | Rice | nucleus | 48.97 | 51.76 |
| GSMUA_Achr11P... | Banana | cytosol | 50.68 | 51.48 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 20.0 | 50.76 |
| Zm00001d049785_P003 | Maize | cytosol | 48.12 | 49.65 |
| EES15333 | Sorghum | cytosol | 48.55 | 49.61 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 48.89 | 49.52 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 50.09 | 49.49 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 48.97 | 49.48 |
| KXG35959 | Sorghum | cytosol | 50.0 | 49.24 |
| Zm00001d006063_P002 | Maize | cytosol | 49.91 | 49.24 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 49.83 | 49.16 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 48.63 | 49.14 |
| Zm00001d021014_P001 | Maize | cytosol | 49.49 | 49.07 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 48.63 | 49.05 |
| Zm00001d031554_P003 | Maize | nucleus | 46.75 | 48.97 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 49.91 | 47.91 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 49.57 | 46.1 |
| AT1G47510.1 | Thale cress | nucleus, plastid | 8.21 | 28.74 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | EntrezGene:837069 | ProteinID:AEE27868.1 | ArrayExpress:AT1G05630 |
| EnsemblPlantsGene:AT1G05630 | RefSeq:AT1G05630 | TAIR:AT1G05630 | RefSeq:AT1G05630-TAIR-G | EnsemblPlants:AT1G05630.1 | TAIR:AT1G05630.1 |
| Symbol:AT5PTASE13 | Unigene:At.42385 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0046856 | InterPro:IPPc |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR036691 | RefSeq:NP_172054.3 | PFAM:PF03372 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000256 | PO:PO:0000262 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11200 |
| PANTHER:PTHR11200:SF137 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 | UniParc:UPI00005DC1A8 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | SEG:seg | : | : | : |
Description
AT5PTASE13Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT1G05630]
Coordinates
chr1:+:1682224..1687363
Molecular Weight (calculated)
129491.0 Da
IEP (calculated)
6.376
GRAVY (calculated)
-0.301
Length
1170 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSLIIEEED EEALATLVPV PPRRKTHSYS LQFDHKPHHQ IRKHSLDEVP RSATLASEAV YFDSSDDEFS TGGNITENAA DETNAGAEEY TIVNPPPNVG
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.