Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0220g00160.t01 | Wine grape | cytosol | 56.56 | 70.52 |
| KRH01856 | Soybean | cytosol | 33.2 | 66.67 |
| CDY47263 | Canola | plastid | 58.11 | 63.1 |
| KRH51310 | Soybean | cytosol | 67.08 | 62.95 |
| Bra015445.1-P | Field mustard | plastid | 57.82 | 62.85 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 60.81 | 61.7 |
| Solyc08g014580.2.1 | Tomato | nucleus | 65.25 | 58.38 |
| Solyc12g019080.1.1 | Tomato | nucleus | 59.46 | 57.95 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 25.77 | 57.92 |
| PGSC0003DMT400052499 | Potato | nucleus | 63.9 | 57.47 |
| PGSC0003DMT400064953 | Potato | cytosol | 64.29 | 57.22 |
| Zm00001d028271_P001 | Maize | cytosol | 15.54 | 56.89 |
| KRH01854 | Soybean | cytosol | 33.98 | 56.87 |
| Os09t0500300-01 | Rice | cytosol | 54.63 | 56.54 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 22.59 | 56.52 |
| CDY10014 | Canola | cytosol, plastid | 57.92 | 55.4 |
| CDY10132 | Canola | cytosol | 59.56 | 55.14 |
| GSMUA_Achr11P... | Banana | cytosol | 60.23 | 54.17 |
| Bra030617.1-P | Field mustard | cytosol | 59.36 | 54.04 |
| CDX86567 | Canola | cytosol | 56.95 | 53.93 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 34.46 | 53.85 |
| CDY15548 | Canola | cytosol | 56.85 | 53.59 |
| AT1G05630.1 | Thale cress | cytosol | 59.94 | 53.08 |
| Bra032456.1-P | Field mustard | cytosol | 57.34 | 52.99 |
| Solyc12g096660.1.1 | Tomato | cytosol | 60.91 | 52.94 |
| CDY34516 | Canola | cytosol | 57.53 | 52.74 |
| CDY42072 | Canola | cytosol | 57.72 | 52.23 |
| CDY06178 | Canola | cytosol | 57.05 | 51.71 |
| Bra005638.1-P | Field mustard | cytosol | 57.14 | 51.66 |
| AT2G31830.2 | Thale cress | cytosol | 57.82 | 51.07 |
| Bra000333.1-P | Field mustard | nucleus | 63.51 | 50.89 |
| CDX95575 | Canola | nucleus | 63.32 | 50.62 |
| Os08t0524100-01 | Rice | nucleus | 53.38 | 49.95 |
| AT2G43900.2 | Thale cress | nucleus | 64.77 | 49.78 |
| EES15333 | Sorghum | cytosol | 54.25 | 49.08 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 55.12 | 48.23 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 55.12 | 48.15 |
| KXG35959 | Sorghum | cytosol | 55.12 | 48.06 |
| Zm00001d049785_P003 | Maize | cytosol | 52.61 | 48.06 |
| Zm00001d021014_P001 | Maize | cytosol | 54.73 | 48.05 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 53.28 | 47.79 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 53.38 | 47.67 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 53.28 | 47.67 |
| Zm00001d006063_P002 | Maize | cytosol | 54.54 | 47.64 |
| Zm00001d031554_P003 | Maize | nucleus | 51.35 | 47.63 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 53.19 | 47.58 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 55.12 | 46.84 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 55.12 | 45.39 |
| VIT_18s0001g11790.t01 | Wine grape | cytosol | 8.78 | 28.62 |
| VIT_00s0220g00170.t01 | Wine grape | nucleus | 6.66 | 24.91 |
Protein Annotations
| EntrezGene:100245620 | wikigene:100245620 | Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | ProteinID:CBI24750 |
| ProteinID:CBI24750.3 | UniProt:D7T2L9 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | EMBL:FN595507 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR036691 | EntrezGene:LOC100245620 | wikigene:LOC100245620 | PFAM:PF03372 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF137 |
| SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF56219 | UniParc:UPI0001BE27B5 | ArrayExpress:VIT_05s0094g01330 |
| EnsemblPlantsGene:VIT_05s0094g01330 | EnsemblPlants:VIT_05s0094g01330.t01 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | RefSeq:XP_002275762 |
| RefSeq:XP_002275762.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5:-:24581724..24587377
Molecular Weight (calculated)
115770.0 Da
IEP (calculated)
6.886
GRAVY (calculated)
-0.436
Length
1036 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEHIEDDER DALAALSSSV PRRKTHSYSQ QLRAGTGQKR QHQVRNHSLD EDRIPKNIER YYNHDDSDDD FHPHASEAGV RVWNMTEAYE PGWGVGGRIR
0101: RGDEDAAPFF ESVNISPTMC LIVDSANRLV WSGHKDGKIR SWKMDQTLEE NPFKEGLSWQ AHRGPVFCLT LSSYGDLWSG SEGGVIKIWP WESMEKSLSL
0201: TQEERHMAAL LVERSFIDLR SQVTVNGVCN ISSSDVKCLV SDKVRAKVWC AGAVSFSLWD ARTRELLKVF NIEGQIENRV DVQSGTDQPV EDEMKVKFVS
0301: TSKKEKPQGF LQRSRNAIMG AADAVRRVAK GAGAFAEDNK RTEALTLTAD GMIWSGCTNG FIVQWDGNGN RLQDFQHHPY GVQCFCAFGE RVYVGYLSGM
0401: VQVLDLDGNL IAGWVAHSSP VIKMAIGADY IFSLATHGGI RGWNIASPGP LDTILRSELA AKETICTRRD NFKILVGTWN VGQGRASPEG LKSWLGSQAT
0501: DVGIVVVGLQ EVEMGAGFLA MSAAKETVGL EGSSIGQWWL DTIGKSLDEG TTFERMGSRQ LAGLLIAIWV RKNLRTHAGD IDAAAVPCGF GRAIGNKGGV
0601: GLRLRVYDRI MCFVNCHLAA HLEAVNRRNA DFDHIYRTMV FSRSSNLLNT AAAGVTTAVQ MIRGSNVGGL NTEEAKPELS DADMVVFLGD FNYRLHSISY
0701: DEARDFVSQR CFDWLREKDQ LRAEMKAGKV FQGMREALIR FPPTYKFERH QAGLAGYDSG EKKRIPAWCD RILYRDNRAA AVSECSLECP VVASILQYEA
0801: CMEVTDSDHK PVRCKFNVEI AHVDRSVRRQ EFGEIVRSEK IRTVLEEFLR VPETIVSSNS ISLQNQETAI LKITNKCRQD QAVFQIICEG LSTVKEEGHG
0901: SEHRPRGSYG FPRWLEVTPA AGMIKPDQFE EVSVRHEEHQ TQEDSADGIP QNWWSEDTRD KEVLLVVRVR GSRSTETKTH QVSVRHTFTA AKPARIDSKS
1001: KNSKKIHGGG SINRSDFRQL SSSSDVHDDH RYLHSP
0101: RGDEDAAPFF ESVNISPTMC LIVDSANRLV WSGHKDGKIR SWKMDQTLEE NPFKEGLSWQ AHRGPVFCLT LSSYGDLWSG SEGGVIKIWP WESMEKSLSL
0201: TQEERHMAAL LVERSFIDLR SQVTVNGVCN ISSSDVKCLV SDKVRAKVWC AGAVSFSLWD ARTRELLKVF NIEGQIENRV DVQSGTDQPV EDEMKVKFVS
0301: TSKKEKPQGF LQRSRNAIMG AADAVRRVAK GAGAFAEDNK RTEALTLTAD GMIWSGCTNG FIVQWDGNGN RLQDFQHHPY GVQCFCAFGE RVYVGYLSGM
0401: VQVLDLDGNL IAGWVAHSSP VIKMAIGADY IFSLATHGGI RGWNIASPGP LDTILRSELA AKETICTRRD NFKILVGTWN VGQGRASPEG LKSWLGSQAT
0501: DVGIVVVGLQ EVEMGAGFLA MSAAKETVGL EGSSIGQWWL DTIGKSLDEG TTFERMGSRQ LAGLLIAIWV RKNLRTHAGD IDAAAVPCGF GRAIGNKGGV
0601: GLRLRVYDRI MCFVNCHLAA HLEAVNRRNA DFDHIYRTMV FSRSSNLLNT AAAGVTTAVQ MIRGSNVGGL NTEEAKPELS DADMVVFLGD FNYRLHSISY
0701: DEARDFVSQR CFDWLREKDQ LRAEMKAGKV FQGMREALIR FPPTYKFERH QAGLAGYDSG EKKRIPAWCD RILYRDNRAA AVSECSLECP VVASILQYEA
0801: CMEVTDSDHK PVRCKFNVEI AHVDRSVRRQ EFGEIVRSEK IRTVLEEFLR VPETIVSSNS ISLQNQETAI LKITNKCRQD QAVFQIICEG LSTVKEEGHG
0901: SEHRPRGSYG FPRWLEVTPA AGMIKPDQFE EVSVRHEEHQ TQEDSADGIP QNWWSEDTRD KEVLLVVRVR GSRSTETKTH QVSVRHTFTA AKPARIDSKS
1001: KNSKKIHGGG SINRSDFRQL SSSSDVHDDH RYLHSP
0001: MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT2G43900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.