Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400052499 | Potato | nucleus | 91.72 | 84.64 |
| Solyc08g014580.2.1 | Tomato | nucleus | 72.34 | 66.41 |
| KRH01854 | Soybean | cytosol | 36.22 | 62.2 |
| KRH51310 | Soybean | cytosol | 62.84 | 60.51 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 57.95 | 59.46 |
| Solyc12g096660.1.1 | Tomato | cytosol | 66.13 | 58.98 |
| CDY47263 | Canola | plastid | 52.49 | 58.49 |
| Bra015445.1-P | Field mustard | plastid | 52.4 | 58.45 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 35.84 | 57.47 |
| CDY10014 | Canola | cytosol, plastid | 56.63 | 55.59 |
| Zm00001d028271_P001 | Maize | cytosol | 14.68 | 55.12 |
| CDY10132 | Canola | cytosol | 57.86 | 54.96 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 52.4 | 54.55 |
| KRH01856 | Soybean | cytosol | 26.34 | 54.26 |
| Bra032456.1-P | Field mustard | cytosol | 56.91 | 53.97 |
| AT1G05630.1 | Thale cress | cytosol | 58.98 | 53.59 |
| Bra030617.1-P | Field mustard | cytosol | 57.29 | 53.51 |
| CDY15548 | Canola | cytosol | 54.94 | 53.14 |
| CDX86567 | Canola | cytosol | 54.47 | 52.92 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 20.6 | 52.9 |
| CDY06178 | Canola | cytosol | 56.26 | 52.32 |
| CDY34516 | Canola | cytosol | 55.13 | 51.86 |
| CDY42072 | Canola | cytosol | 55.32 | 51.35 |
| Bra005638.1-P | Field mustard | cytosol | 55.32 | 51.31 |
| Solyc11g008800.1.1 | Tomato | cytosol | 55.41 | 50.91 |
| AT2G31830.2 | Thale cress | cytosol | 56.07 | 50.81 |
| Os09t0500300-01 | Rice | cytosol | 47.32 | 50.25 |
| Bra000333.1-P | Field mustard | nucleus | 60.4 | 49.65 |
| CDX95575 | Canola | nucleus | 60.3 | 49.46 |
| AT2G43900.2 | Thale cress | nucleus | 62.46 | 49.26 |
| GSMUA_Achr11P... | Banana | cytosol | 53.06 | 48.96 |
| Os08t0524100-01 | Rice | nucleus | 49.67 | 47.7 |
| EES15333 | Sorghum | cytosol | 50.8 | 47.16 |
| KXG35959 | Sorghum | cytosol | 52.3 | 46.8 |
| Zm00001d006063_P002 | Maize | cytosol | 52.21 | 46.8 |
| Zm00001d021014_P001 | Maize | cytosol | 51.93 | 46.78 |
| Zm00001d049785_P003 | Maize | cytosol | 49.39 | 46.3 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 51.55 | 46.28 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 50.42 | 46.21 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 51.46 | 46.12 |
| Zm00001d031554_P003 | Maize | nucleus | 48.35 | 46.02 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 49.95 | 45.85 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 49.67 | 45.71 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 49.76 | 45.68 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 51.27 | 44.71 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 51.83 | 43.8 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 18.53 | 42.73 |
| Solyc04g079820.2.1 | Tomato | cytosol | 8.94 | 28.11 |
| Solyc12g019070.1.1 | Tomato | cytosol | 1.22 | 9.29 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | InterPro:IPR036691 | UniProt:K4DDD5 | PFAM:PF03372 | PFscan:PS50294 | PANTHER:PTHR11200 |
| PANTHER:PTHR11200:SF137 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 | EnsemblPlantsGene:Solyc12g019080.1 |
| EnsemblPlants:Solyc12g019080.1.1 | UniParc:UPI00027696EC | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | SEG:seg |
Description
No Description!
Coordinates
chr12:-:9077732..9083860
Molecular Weight (calculated)
118487.0 Da
IEP (calculated)
7.482
GRAVY (calculated)
-0.440
Length
1063 amino acids
Sequence
(BLAST)
(BLAST)
0001: MMNDKKFEED EKKALEGLSN APITPRKKVH SYSHQLRTNT GTHHKRYHQF RHHSFDIPTN FIDNNNNHDH HGLIYNDDDS SDDEDFFPYS TYSTTTTGAG
0101: HVFDAGNFGP TVLEDEGNNQ QQALPEFVGG GGGVGIFKVP TRASVHPSRP SCHELRPHPL RETQVGKFLR TIACTETQLW AGLECGIRVW NFSDQYKSGM
0201: GIGERARRGD EDAAPFHEST STSPTLCLMV DSGSRLIWSG HKDGKIRSWK MDQSNFHESS FKEGLSWQAH RGSVLSMVMS SYGDIWSGSE GGNIRVWPWE
0301: SIHKSLSLSS EERHMAALLV ERSIVDLKSQ VTVNGVCNIS SSDVKCLLSD HVRAKVWAAG SASFSLWDAR TRELLKVYNT EGQIENRGDM SSVQEQATED
0401: EMNAKVSSKP KKEKSQGSSF LQRSRNAIMG AAEAVRRVAS KGAGAFAEDS KKTEALVLAA DGMIWSGCSN GLLVHWDGNG NRLQDFHHHP CAVLSLCAHG
0501: SRIWVGYISG MVQMLDLEGN LLVGWVAHNG PVVKMVVGDN YLFSLATHGG IRGWSLASPG PIDNIIRPDL AEKEHLYTRK EDFRILVGTW NVGQGRVSQE
0601: ALEAWLGSTV SDVGIVVVGL QEVEMGAGFL AMSAAKESVG LEGSAMGQWW QDAIGKALDE GSTFERVGSR QLAALLIAIW VRKSLRNHVG DLDVGAVACG
0701: LGRAIGNKGG VGLRLRVFDR IMCFVNCHLA AHLEAITRRN ADFDHIYRTM SFTRSSNLLN NASVGVSSAA QVLRGTNAAA INPDEGKPDL AEADMVIFFG
0801: DFNYRLFGIS YDEARDFVSQ RSFDWLRERD QLRAEMKTGK VFQGMREAII KFPPTYKFER GKPGLGGYDS GEKKRIPAWC DRVLYRDSRT SPTVECSLGC
0901: PVVASIIQYE GCMEVTESDH KPVRCKFNIE LAHIDRSVRR QEFGKVFQNN DRIRSVLNEL RYVPETNIST SQIVLQNKDT FSLQISNKSR EDMVLFQITC
1001: SGQSTTKEDT QASEYHPRGS LGFPRWLEEV QRLLKEPKMV NLDYRLSLHT DMHIVRKKRR NKH
0101: HVFDAGNFGP TVLEDEGNNQ QQALPEFVGG GGGVGIFKVP TRASVHPSRP SCHELRPHPL RETQVGKFLR TIACTETQLW AGLECGIRVW NFSDQYKSGM
0201: GIGERARRGD EDAAPFHEST STSPTLCLMV DSGSRLIWSG HKDGKIRSWK MDQSNFHESS FKEGLSWQAH RGSVLSMVMS SYGDIWSGSE GGNIRVWPWE
0301: SIHKSLSLSS EERHMAALLV ERSIVDLKSQ VTVNGVCNIS SSDVKCLLSD HVRAKVWAAG SASFSLWDAR TRELLKVYNT EGQIENRGDM SSVQEQATED
0401: EMNAKVSSKP KKEKSQGSSF LQRSRNAIMG AAEAVRRVAS KGAGAFAEDS KKTEALVLAA DGMIWSGCSN GLLVHWDGNG NRLQDFHHHP CAVLSLCAHG
0501: SRIWVGYISG MVQMLDLEGN LLVGWVAHNG PVVKMVVGDN YLFSLATHGG IRGWSLASPG PIDNIIRPDL AEKEHLYTRK EDFRILVGTW NVGQGRVSQE
0601: ALEAWLGSTV SDVGIVVVGL QEVEMGAGFL AMSAAKESVG LEGSAMGQWW QDAIGKALDE GSTFERVGSR QLAALLIAIW VRKSLRNHVG DLDVGAVACG
0701: LGRAIGNKGG VGLRLRVFDR IMCFVNCHLA AHLEAITRRN ADFDHIYRTM SFTRSSNLLN NASVGVSSAA QVLRGTNAAA INPDEGKPDL AEADMVIFFG
0801: DFNYRLFGIS YDEARDFVSQ RSFDWLRERD QLRAEMKTGK VFQGMREAII KFPPTYKFER GKPGLGGYDS GEKKRIPAWC DRVLYRDSRT SPTVECSLGC
0901: PVVASIIQYE GCMEVTESDH KPVRCKFNIE LAHIDRSVRR QEFGKVFQNN DRIRSVLNEL RYVPETNIST SQIVLQNKDT FSLQISNKSR EDMVLFQITC
1001: SGQSTTKEDT QASEYHPRGS LGFPRWLEEV QRLLKEPKMV NLDYRLSLHT DMHIVRKKRR NKH
0001: MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVSKLKRSI LSHNSLKTRL VMMTRSSSFF LFFQVMPAAG TIKPDSSVEV SVHHEEFHTL EEFVDGIPQN WWCEDTRDKE
1101: AILVVNVQGG CSTETVCHRV HVRHCFSAKN LRIDSNPSNS KSQSLKKNEG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS
1201: NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSCSKS QKKSDGDTNS KSQKKGDGDS SSKSHKKNDG DSSSKSHKKN DGDSSSKSHK KSDGDSSSKS
1301: HKKSEGDSSS KSHKKNDGDS SSSYKSQSGK KNSNSSTVEE SRNNHNKR
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVSKLKRSI LSHNSLKTRL VMMTRSSSFF LFFQVMPAAG TIKPDSSVEV SVHHEEFHTL EEFVDGIPQN WWCEDTRDKE
1101: AILVVNVQGG CSTETVCHRV HVRHCFSAKN LRIDSNPSNS KSQSLKKNEG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS
1201: NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSCSKS QKKSDGDTNS KSQKKGDGDS SSKSHKKNDG DSSSKSHKKN DGDSSSKSHK KSDGDSSSKS
1301: HKKSEGDSSS KSHKKNDGDS SSSYKSQSGK KNSNSSTVEE SRNNHNKR
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT2G43900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.