Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G278100.1 | Wheat | nucleus | 95.78 | 95.95 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 96.21 | 93.6 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 93.42 | 88.08 |
| Os09t0500300-01 | Rice | cytosol | 74.03 | 87.71 |
| Zm00001d006063_P002 | Maize | cytosol | 82.12 | 82.12 |
| Zm00001d021014_P001 | Maize | cytosol | 81.62 | 82.03 |
| KXG35959 | Sorghum | cytosol | 81.96 | 81.82 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 67.88 | 69.7 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 54.3 | 63.08 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 34.91 | 62.44 |
| VIT_00s0220g00160.t01 | Wine grape | cytosol | 41.65 | 59.45 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 22.6 | 58.13 |
| GSMUA_Achr11P... | Banana | cytosol | 55.06 | 56.68 |
| CDY47263 | Canola | plastid | 45.19 | 56.18 |
| Bra015445.1-P | Field mustard | plastid | 45.11 | 56.14 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 48.15 | 55.12 |
| KRH01856 | Soybean | cytosol | 23.69 | 54.46 |
| PGSC0003DMT400070365 | Potato | cytosol | 11.8 | 52.83 |
| KRH51310 | Soybean | cytosol | 49.07 | 52.72 |
| CDY07455 | Canola | cytosol | 41.99 | 52.53 |
| CDY10132 | Canola | cytosol | 49.49 | 52.46 |
| CDY10014 | Canola | cytosol, plastid | 47.89 | 52.45 |
| KRH34234 | Soybean | cytosol | 48.57 | 52.36 |
| CDY39279 | Canola | cytosol | 42.33 | 51.75 |
| AT1G65580.1 | Thale cress | nucleus | 47.89 | 51.59 |
| Solyc12g019080.1.1 | Tomato | nucleus | 46.12 | 51.46 |
| Solyc08g014580.2.1 | Tomato | nucleus | 50.08 | 51.3 |
| CDY15548 | Canola | cytosol | 47.39 | 51.14 |
| CDX86567 | Canola | cytosol | 47.13 | 51.1 |
| Bra030617.1-P | Field mustard | cytosol | 48.9 | 50.97 |
| PGSC0003DMT400064953 | Potato | cytosol | 50.0 | 50.95 |
| Bra032456.1-P | Field mustard | cytosol | 48.15 | 50.94 |
| KRG92557 | Soybean | golgi, plasma membrane | 49.07 | 50.92 |
| Solyc11g008800.1.1 | Tomato | cytosol | 48.9 | 50.13 |
| PGSC0003DMT400052499 | Potato | nucleus | 48.65 | 50.09 |
| CDY06178 | Canola | cytosol | 48.06 | 49.87 |
| AT1G05630.1 | Thale cress | cytosol | 49.16 | 49.83 |
| Bra004120.1-P | Field mustard | nucleus | 47.05 | 49.78 |
| CDY34516 | Canola | cytosol | 46.71 | 49.03 |
| Bra005638.1-P | Field mustard | cytosol | 47.22 | 48.87 |
| CDY42072 | Canola | cytosol | 46.88 | 48.56 |
| KRH01854 | Soybean | cytosol | 25.21 | 48.3 |
| AT2G31830.2 | Thale cress | cytosol | 46.88 | 47.4 |
| TraesCS4B01G221300.1 | Wheat | cytosol | 43.0 | 47.35 |
| Solyc12g096660.1.1 | Tomato | cytosol | 47.39 | 47.15 |
| Bra000333.1-P | Field mustard | nucleus | 48.31 | 44.32 |
| CDX95575 | Canola | nucleus | 48.06 | 43.98 |
| AT2G43900.2 | Thale cress | nucleus | 49.33 | 43.4 |
| TraesCS4B01G070500.1 | Wheat | cytosol | 8.85 | 30.88 |
Protein Annotations
| MapMan:27.5.4.2 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0046856 |
| InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR036691 | PFAM:PF03372 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF145 |
| SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 | EnsemblPlantsGene:TraesCS5B01G277500 | EnsemblPlants:TraesCS5B01G277500.1 |
| InterPro:WD40_repeat | TIGR:cd09074 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5B:+:463845569..463851549
Molecular Weight (calculated)
129471.0 Da
IEP (calculated)
6.843
GRAVY (calculated)
-0.385
Length
1186 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPDDEALKE LAAASSRAPQ RRGISYSQPL SRGDTASARR AALRNHSLDD DHILPASHSL SYAHHDPSAG APAGYHPPLP PQQQQQHHHH PSASYSSGPS
0101: SRRSVGGASD GSMTLERAMS EYGGGAGTLP EFVGAGGGKG IFRVPLRAAM HPHRPPPLEV RPHPLRETQA GSFLRTLASD PQRRQLWAGA ESGIRVWALD
0201: EVFAGWGAGA RRGDEESAPF REGVPAPPAL CVAMDKANGL LWTGHKDGRI RSWRMDLETA ATAPAPPPPG SGGEGSVGGS AHGGPNSAPV FREALTWQAY
0301: GRTPVLSMAI TSYGEIWSGS EAGVIKAWPY DAIAKSLSLS PEERHMAALL VERAYIDLRN HCTVGNVCSL PASDVKYMLA DHSRAKVWTL TSMTFALWDA
0401: RTRELLKVFG MDGQVESARL DAPVMPEQPM EEVEVKVKPS KKDKSGGSLN FFQKSRNALM GAADAVRRVA TKGTFVEDNR RTGAVAQADD GAIWSGCTNG
0501: CIIQWDGNGN RIQEFQHHTS SVQCIKALGD RVWVGYASGT VQVMDVDGNL LAGWTGHSCP VIRMAIGGSY IYTLAHHGGI RGWPLTSPGP LDDVLRTELA
0601: NKELSYTRME KINIMVGSWN VAQGKATAES LKAWLGSVAS DVGLVVVGLQ EVEMGAGFLA ISAAKETVGL EGSANGQWWI DNIGKALDEG TSFHRVGSRQ
0701: LAALLIAAWA RKSLKPYVGD VEAAAVPCGL GRAIGNKGGV GLRIRVYDRK MCFVSNHFAA HLEAVARRNA DFDHIYRTMA FNKPHGSTSS ATSVQLHKTV
0801: NVNGNQVDEV RPDLADADMV VFLGDFNYRL YGITYDEARD MVSQRSFDWL REKDQLRAEM KAGKVFQGMR EGLIKFPPTY KFQKHAPGLG GYDSGEKKRI
0901: PAWCDRVLYR DSRAVSVAEC SLECPVVAAI TSYVAVMEVT ESDHKPVRCT FSVDIARVDE LTRRQEYGEI IESNEEVRSM LKESCFVPDS TVSTEEIILE
1001: NQENIVFQIT NNCETSKAAF EILCEGQSTK KDDGTKPEII PRASFGFPLW LEVLPANGLI KPGETVDITI HHEDFYTQEE FVDGIPQNWW CEDTRDKEAV
1101: IMVNITGSTS TETKTHMINV RHRCPATSAP PPINPPVTLT PPVNNMPTEA PSKRSSKKKE TSRQQQQDYA QFASTEVHDL YRMRCP
0101: SRRSVGGASD GSMTLERAMS EYGGGAGTLP EFVGAGGGKG IFRVPLRAAM HPHRPPPLEV RPHPLRETQA GSFLRTLASD PQRRQLWAGA ESGIRVWALD
0201: EVFAGWGAGA RRGDEESAPF REGVPAPPAL CVAMDKANGL LWTGHKDGRI RSWRMDLETA ATAPAPPPPG SGGEGSVGGS AHGGPNSAPV FREALTWQAY
0301: GRTPVLSMAI TSYGEIWSGS EAGVIKAWPY DAIAKSLSLS PEERHMAALL VERAYIDLRN HCTVGNVCSL PASDVKYMLA DHSRAKVWTL TSMTFALWDA
0401: RTRELLKVFG MDGQVESARL DAPVMPEQPM EEVEVKVKPS KKDKSGGSLN FFQKSRNALM GAADAVRRVA TKGTFVEDNR RTGAVAQADD GAIWSGCTNG
0501: CIIQWDGNGN RIQEFQHHTS SVQCIKALGD RVWVGYASGT VQVMDVDGNL LAGWTGHSCP VIRMAIGGSY IYTLAHHGGI RGWPLTSPGP LDDVLRTELA
0601: NKELSYTRME KINIMVGSWN VAQGKATAES LKAWLGSVAS DVGLVVVGLQ EVEMGAGFLA ISAAKETVGL EGSANGQWWI DNIGKALDEG TSFHRVGSRQ
0701: LAALLIAAWA RKSLKPYVGD VEAAAVPCGL GRAIGNKGGV GLRIRVYDRK MCFVSNHFAA HLEAVARRNA DFDHIYRTMA FNKPHGSTSS ATSVQLHKTV
0801: NVNGNQVDEV RPDLADADMV VFLGDFNYRL YGITYDEARD MVSQRSFDWL REKDQLRAEM KAGKVFQGMR EGLIKFPPTY KFQKHAPGLG GYDSGEKKRI
0901: PAWCDRVLYR DSRAVSVAEC SLECPVVAAI TSYVAVMEVT ESDHKPVRCT FSVDIARVDE LTRRQEYGEI IESNEEVRSM LKESCFVPDS TVSTEEIILE
1001: NQENIVFQIT NNCETSKAAF EILCEGQSTK KDDGTKPEII PRASFGFPLW LEVLPANGLI KPGETVDITI HHEDFYTQEE FVDGIPQNWW CEDTRDKEAV
1101: IMVNITGSTS TETKTHMINV RHRCPATSAP PPINPPVTLT PPVNNMPTEA PSKRSSKKKE TSRQQQQDYA QFASTEVHDL YRMRCP
0001: MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT2G43900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.