Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G082700.1 | Wheat | cytosol | 97.68 | 97.68 |
| TraesCS4D01G221700.1 | Wheat | cytosol | 97.59 | 97.59 |
| HORVU0Hr1G008620.1 | Barley | mitochondrion | 95.08 | 92.59 |
| Os02t0477700-01 | Rice | cytosol | 12.16 | 76.61 |
| OQU84937 | Sorghum | cytosol | 71.59 | 69.65 |
| Zm00001d016486_P001 | Maize | cytosol | 70.19 | 67.99 |
| GSMUA_Achr3P02440_001 | Banana | mitochondrion | 47.91 | 51.91 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 47.35 | 43.0 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 45.5 | 42.42 |
| TraesCS4B01G070500.1 | Wheat | cytosol | 8.91 | 28.24 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0046856 | InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR036691 | PFAM:PF03372 |
| PANTHER:PTHR11200 | PANTHER:PTHR11200:SF137 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 |
| EnsemblPlantsGene:TraesCS4B01G221300 | EnsemblPlants:TraesCS4B01G221300.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | TIGR:cd09074 | SEG:seg |
Description
No Description!
Coordinates
chr4B:-:465477143..465487879
Molecular Weight (calculated)
116640.0 Da
IEP (calculated)
7.702
GRAVY (calculated)
-0.248
Length
1077 amino acids
Sequence
(BLAST)
(BLAST)
0001: MADPGDTATP AAVVSSPWDD VPDDFFLSAS ISPPTPPPAP APIPSTSPPA PSALRSASLP VTSIPPASAS ASFSGSLHRA IAPQPIHPSH SLPAFSAASL
0101: PAVADVCPPP PGPHHSNSLS EFAASASQSR VHRPPPRAAV RADRPPPLEL RPRPPRESQS GIALCALACC AAPGAGASTH LWAAGEAGVR VWDLADAFRS
0201: PTSPRRWGDE ASAPFRESRK TPPAICLVAD PGRGLVWSGH TNGRIMGWGA DPGPEAGERI GWDAHRGPVF AMVISPYGDL WSGSEGGIIK VWNGQAIEKS
0301: LALEREEKCK ASLLVERSFI DLWTMVSDGG ACPLPSVDVK LLLSDNSRSK VWSAGYLSFA LWDSRTKDLL KVVNVDGQVD TRFDVLSAQD PYGHETKQNL
0401: FSSPKKEKAR SPVNFFQRSR NALMGAADAV RRVAAKAGFG DDTRRIEALV MSMDGMIWTG SANGSVAQWD GSGNRLQEFQ HHSSSVQSIF NFGTRLWVGY
0501: MDGNIQLLDL DGNLLGGWIA HSSPILSMAV GSSYIFTLAG HGGVRGWNLS SPGPADSILR SELTEKETSY KNIEYMKVLV CSWNVGQEKA SYESLRAWLK
0601: FPTQEVGVVV VGLQEVEMGA GFLAMSAAKE TVGLEGSPNG EWWLDAIGQI LKGRSFERVG SRQMAGLLTA VWVRTNLKHF VGDIDNAAVA CGLGRAIGNK
0701: GAVGLRMRIH DRSICFINCH LAAHMEAVSR RNEDFDHVFR TMTFATPSSG LLTTSISGSA GQLLQANGSR MPELSDTDMI VFLGDFNYRL YDISYEEAMG
0801: LVSRRRFDWL RKNDQLRAEM RSGRVFQGLR EGDFQFPPTY KFEKHKTGLS GYDCSEKKRI PAWCDRVLYR DSQASSGTEC SLDCPVVCSV SLYDSCMEAT
0901: DSDHKPVKCL FNLDVARVDK QTMRQKYGEI MSSNKKVLHL LQGLKAFPEA NVSTNDIILQ DQTPYIFKLQ NRSPEDRACF EITGQAPTSS GTDSAGFPTW
1001: LKVSPAAGII CPGQTVEVTL QHGDLRGTSW NNLSGANQEK AAQLSVKITG VCSTVAKCYG VRVQCQKGPS TFPFKRF
0101: PAVADVCPPP PGPHHSNSLS EFAASASQSR VHRPPPRAAV RADRPPPLEL RPRPPRESQS GIALCALACC AAPGAGASTH LWAAGEAGVR VWDLADAFRS
0201: PTSPRRWGDE ASAPFRESRK TPPAICLVAD PGRGLVWSGH TNGRIMGWGA DPGPEAGERI GWDAHRGPVF AMVISPYGDL WSGSEGGIIK VWNGQAIEKS
0301: LALEREEKCK ASLLVERSFI DLWTMVSDGG ACPLPSVDVK LLLSDNSRSK VWSAGYLSFA LWDSRTKDLL KVVNVDGQVD TRFDVLSAQD PYGHETKQNL
0401: FSSPKKEKAR SPVNFFQRSR NALMGAADAV RRVAAKAGFG DDTRRIEALV MSMDGMIWTG SANGSVAQWD GSGNRLQEFQ HHSSSVQSIF NFGTRLWVGY
0501: MDGNIQLLDL DGNLLGGWIA HSSPILSMAV GSSYIFTLAG HGGVRGWNLS SPGPADSILR SELTEKETSY KNIEYMKVLV CSWNVGQEKA SYESLRAWLK
0601: FPTQEVGVVV VGLQEVEMGA GFLAMSAAKE TVGLEGSPNG EWWLDAIGQI LKGRSFERVG SRQMAGLLTA VWVRTNLKHF VGDIDNAAVA CGLGRAIGNK
0701: GAVGLRMRIH DRSICFINCH LAAHMEAVSR RNEDFDHVFR TMTFATPSSG LLTTSISGSA GQLLQANGSR MPELSDTDMI VFLGDFNYRL YDISYEEAMG
0801: LVSRRRFDWL RKNDQLRAEM RSGRVFQGLR EGDFQFPPTY KFEKHKTGLS GYDCSEKKRI PAWCDRVLYR DSQASSGTEC SLDCPVVCSV SLYDSCMEAT
0901: DSDHKPVKCL FNLDVARVDK QTMRQKYGEI MSSNKKVLHL LQGLKAFPEA NVSTNDIILQ DQTPYIFKLQ NRSPEDRACF EITGQAPTSS GTDSAGFPTW
1001: LKVSPAAGII CPGQTVEVTL QHGDLRGTSW NNLSGANQEK AAQLSVKITG VCSTVAKCYG VRVQCQKGPS TFPFKRF
0001: MDSLIIEEED EEALATLVPV PPRRKTHSYS LQFDHKPHHQ IRKHSLDEVP RSATLASEAV YFDSSDDEFS TGGNITENAA DETNAGAEEY TIVNPPPNVG
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR
Arabidopsis Description
AT5PTASE13Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT1G05630]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.