Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34516 | Canola | cytosol | 94.93 | 96.19 |
| Bra005638.1-P | Field mustard | cytosol | 94.85 | 94.76 |
| AT2G31830.2 | Thale cress | cytosol | 83.14 | 81.16 |
| CDY47263 | Canola | plastid | 60.7 | 72.85 |
| CDY10132 | Canola | cytosol | 68.82 | 70.42 |
| CDX86567 | Canola | cytosol | 66.38 | 69.47 |
| CDY15548 | Canola | cytosol | 66.64 | 69.43 |
| CDY10014 | Canola | cytosol, plastid | 65.33 | 69.07 |
| CDY06178 | Canola | cytosol | 66.11 | 66.23 |
| KRH51310 | Soybean | cytosol | 57.29 | 59.42 |
| KRH01854 | Soybean | cytosol | 31.7 | 58.64 |
| KRH01856 | Soybean | cytosol | 26.11 | 57.95 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 52.23 | 57.72 |
| Solyc12g019080.1.1 | Tomato | nucleus | 51.35 | 55.32 |
| Solyc08g014580.2.1 | Tomato | nucleus | 55.46 | 54.84 |
| PGSC0003DMT400064953 | Potato | cytosol | 55.2 | 54.3 |
| PGSC0003DMT400052499 | Potato | nucleus | 54.41 | 54.08 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 47.95 | 53.77 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 30.66 | 52.94 |
| CDY07455 | Canola | cytosol | 43.76 | 52.85 |
| CDY39279 | Canola | cytosol | 44.28 | 52.27 |
| CDX95575 | Canola | nucleus | 58.78 | 51.93 |
| Zm00001d028271_P001 | Maize | cytosol | 12.75 | 51.59 |
| Os09t0500300-01 | Rice | cytosol | 44.1 | 50.45 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 18.08 | 50.0 |
| Solyc12g096660.1.1 | Tomato | cytosol | 51.27 | 49.24 |
| Os08t0524100-01 | Rice | nucleus | 47.16 | 48.78 |
| GSMUA_Achr11P... | Banana | cytosol | 48.3 | 48.0 |
| EES15333 | Sorghum | cytosol | 47.86 | 47.86 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 19.13 | 47.51 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 48.56 | 46.96 |
| Zm00001d021014_P001 | Maize | cytosol | 48.38 | 46.95 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 48.56 | 46.88 |
| Zm00001d006063_P002 | Maize | cytosol | 48.47 | 46.8 |
| KXG35959 | Sorghum | cytosol | 48.47 | 46.72 |
| Zm00001d031554_P003 | Maize | nucleus | 45.41 | 46.55 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 46.99 | 46.46 |
| Zm00001d049785_P003 | Maize | cytosol | 45.94 | 46.38 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 46.72 | 46.32 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 46.64 | 46.03 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 46.55 | 46.03 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 48.47 | 45.53 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 48.65 | 44.28 |
| CDY06733 | Canola | cytosol | 8.12 | 28.27 |
| CDY17072 | Canola | cytosol | 8.03 | 27.96 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | GO:A0A078HW98 | UniProt:A0A078HW98 | EnsemblPlants:CDY42072 |
| ProteinID:CDY42072 | ProteinID:CDY42072.1 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0046856 | EnsemblPlantsGene:GSBRNA2T00074111001 | InterPro:IPPc | InterPro:IPR000535 | InterPro:IPR001680 |
| InterPro:IPR015943 | InterPro:IPR036691 | InterPro:MSP_dom | PFAM:PF03372 | PFscan:PS50202 | PANTHER:PTHR11200 |
| PANTHER:PTHR11200:SF137 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 | UniParc:UPI0004EEED04 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | SEG:seg | : | : | : |
Description
BnaA05g11140DBnaA05g11140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HW98]
Coordinates
chrLK032514:-:48273..53058
Molecular Weight (calculated)
125928.0 Da
IEP (calculated)
6.826
GRAVY (calculated)
-0.409
Length
1145 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSVIIEPDE REALSSLVPS HPPPRKTHSY VEQYEQKPQH HPIRKYSLDE GSRSVPTDSE PVYFDSSDGE FSTEGVATVD GRTGGERGNV EDDHCLITPP
0101: SKPAPAPEPQ RGEIAGHGGE VGGGEGGEDI EPLPEFMGAG GGVDVFKVPV RAAVNPGRPP CLEIRPHPLR ETQTGKFLRN IACTESQLWA GQENGVRFWN
0201: LEEAYEVGYG VGGQVRRGDE DTAPFHESVA ISPTLCMMID HGNRLVWSGH KDGKIRAWKM DQAVTNTADD SKPFKERLSW QAHRGPVNYI VISSYGDMWS
0301: CSDGGVIKIW TFDSLEKSLV LKAEEKHMAA LLVERSGIDL RSQVTVNGTC SISSSDVKFL LVDTVRAKVW AVQHLSFSMW DAQNKDLLKV FNIDGQVENR
0401: VDGTPAQGQQ VEETKAKFFS TPKKDKSQGF LQRSRHAIMG AAGAVRRAAT RSTGAFAEDP RKVEAIAIAA DGSIWTGSMN GVIAQWDGNG NRLREVNHHQ
0501: QAVLCFCTFG DRIYVGYSSG YIQILDLGGK LVASWVSHNE PVIKLAAGGG FIFSLATHGG VRGWYVTSPG PLDSVIRTEL SQKGNTYARQ DSVKILIGTW
0601: NVGEGRASRG ALMSWLGSDV SDVGIVAVGL QEVDMGAGFL AMSTAKETVG VEGSVVGKWW IDAIGNALDE RNTFERMGSR QLAGLLISLW VRKDIRTHVG
0701: DLDVAAVPCG FGRAIGNKGG VGLRIRVYDR IMCFVNCHLA AHLEAVTRRN ADFNHIYRSM VFSKGQSLYT VPAAGASSST QAQKNNTNTN IITEEEKSDL
0801: AAADFVAFFG DFNYRLFGIT YDEARDFISH RSFDWLREKD QLRAEMSEGK VFQGMREALI TFPPTYKFEK NKPGLGGYDS GEKKRIPAWC DRVIYRDNQS
0901: TPFCECNLQC PVVSCTVMYE ACMDVTESDH KPVRCKLHAN IAHTDKSVRR QELGKIIKSS EKLRTMFEEL RYVPETSVST NSILLQSQDT FIFSITNKSN
1001: SSRALFNIVC KGQTVVRDDG GTFGLPRWLE VSPGAGMIKP DASVQVKVHH EDSNTSDESF DGIQQQNSSC EEACDKEVTL MVIIQGSCST RTTSHSIKVR
1101: YCFSAAKSVN LAYSKPKPNN ATKNNQEGST RYQPESYRGG STRRG
0101: SKPAPAPEPQ RGEIAGHGGE VGGGEGGEDI EPLPEFMGAG GGVDVFKVPV RAAVNPGRPP CLEIRPHPLR ETQTGKFLRN IACTESQLWA GQENGVRFWN
0201: LEEAYEVGYG VGGQVRRGDE DTAPFHESVA ISPTLCMMID HGNRLVWSGH KDGKIRAWKM DQAVTNTADD SKPFKERLSW QAHRGPVNYI VISSYGDMWS
0301: CSDGGVIKIW TFDSLEKSLV LKAEEKHMAA LLVERSGIDL RSQVTVNGTC SISSSDVKFL LVDTVRAKVW AVQHLSFSMW DAQNKDLLKV FNIDGQVENR
0401: VDGTPAQGQQ VEETKAKFFS TPKKDKSQGF LQRSRHAIMG AAGAVRRAAT RSTGAFAEDP RKVEAIAIAA DGSIWTGSMN GVIAQWDGNG NRLREVNHHQ
0501: QAVLCFCTFG DRIYVGYSSG YIQILDLGGK LVASWVSHNE PVIKLAAGGG FIFSLATHGG VRGWYVTSPG PLDSVIRTEL SQKGNTYARQ DSVKILIGTW
0601: NVGEGRASRG ALMSWLGSDV SDVGIVAVGL QEVDMGAGFL AMSTAKETVG VEGSVVGKWW IDAIGNALDE RNTFERMGSR QLAGLLISLW VRKDIRTHVG
0701: DLDVAAVPCG FGRAIGNKGG VGLRIRVYDR IMCFVNCHLA AHLEAVTRRN ADFNHIYRSM VFSKGQSLYT VPAAGASSST QAQKNNTNTN IITEEEKSDL
0801: AAADFVAFFG DFNYRLFGIT YDEARDFISH RSFDWLREKD QLRAEMSEGK VFQGMREALI TFPPTYKFEK NKPGLGGYDS GEKKRIPAWC DRVIYRDNQS
0901: TPFCECNLQC PVVSCTVMYE ACMDVTESDH KPVRCKLHAN IAHTDKSVRR QELGKIIKSS EKLRTMFEEL RYVPETSVST NSILLQSQDT FIFSITNKSN
1001: SSRALFNIVC KGQTVVRDDG GTFGLPRWLE VSPGAGMIKP DASVQVKVHH EDSNTSDESF DGIQQQNSSC EEACDKEVTL MVIIQGSCST RTTSHSIKVR
1101: YCFSAAKSVN LAYSKPKPNN ATKNNQEGST RYQPESYRGG STRRG
0001: MDSVIIEPDE REALASLVPA HPLPPRKTHS YVEQCEQKPH HPIRKYSLDE GSRSVTSDSE AVYFDSSDGE FSTEGVAIVD GRTSGERGNG EECGFVTPPS
0101: KPASQGGGND GGREDDIESL PEFIGAGGGL DVFKVPVRAA VNPGRPPCLE LRPHPLRETQ TGKFLRNIAC TESQLWAGQE NGVRFWNLEE AYEVGCGLGG
0201: QVRRGDEDTA PFHESVPTSP ALCLLVDHGN RLVWTGHKDG KIRAWKMNQP NTTTADDSKP FKERLSWQAH RGPVNYIVIS SYGDMWSCSD GGVIKIWTLD
0301: SLEKSLVLKL EEKHMAALLV ERSGIDLRSQ VTVNGTCSIS SSDVKFLLVD TVKAKVWAVQ HLSFSLWDAQ NKELLKVFNI DGQVENRVDM PPTQGQQVED
0401: TKAKFFSAPK KEKSQGFLQR SRHAIMGAAG AVRRAATRSA GAFAEDTRKV EAIAIAADGS IWTGSMNGVI AQWDGNGSRL REVNHHQQAV LCFCTFGDRI
0501: YVGYSSGYIQ VLDLGGKLIA SWVSHNEPVI KLAAGGGFIF SLATHGGVRG WYVTSPGPLD SLIRTELSQK EMAYARQDSV KILIGTWNVG EGRASRGALV
0601: SWLGSAVSDV GIVAIGLQEV DMGAGFLAMS TAKETVGVEG SAVGQWWLDA IGNALDERNT FERMGSRQLA GLLISLWVRK SIRTHVGDLD VAAVPCGFGR
0701: AIGNKGGVGL RIRVYDRIMC FVNCHLAAHL EAVTRRNADF NHIYRSMVFS KGQSVYTAAA AGASTSAQAL KNNPNTNNST EEEKSHLASA DLVAFFGDFN
0801: YRLFGITYDE ARDFISHRSF DWLREKDQLR QEMNEGKVFQ GMREALITFP PTYKFEKNKP GLGGYDSGEK KRIPAWCDRV IYRDNQSISY TECSLKCPVV
0901: SSTIMYEACM DVTESDHKPV RCKLHANIAH TDKSVRRQEL GKIVKSNEKL RAMFEELKSV PETSVSTNNI LLHSQDTFIF TIRNTSNSSR AIFNIVCKGQ
1001: TLVREDGEEP DNHSRGTFGL PRWLEVSPGA GIIKPDASLQ VKVHHEDSHN SEEFIDGIQQ NSLSEESSDK EVTLIIIVQG SCSTRTISHS IKVRHCSSAA
1101: KSLSLVHSKT TTMTKNLEGS TRYQTDANRG GSTRHRTDDS TRRG
0101: KPASQGGGND GGREDDIESL PEFIGAGGGL DVFKVPVRAA VNPGRPPCLE LRPHPLRETQ TGKFLRNIAC TESQLWAGQE NGVRFWNLEE AYEVGCGLGG
0201: QVRRGDEDTA PFHESVPTSP ALCLLVDHGN RLVWTGHKDG KIRAWKMNQP NTTTADDSKP FKERLSWQAH RGPVNYIVIS SYGDMWSCSD GGVIKIWTLD
0301: SLEKSLVLKL EEKHMAALLV ERSGIDLRSQ VTVNGTCSIS SSDVKFLLVD TVKAKVWAVQ HLSFSLWDAQ NKELLKVFNI DGQVENRVDM PPTQGQQVED
0401: TKAKFFSAPK KEKSQGFLQR SRHAIMGAAG AVRRAATRSA GAFAEDTRKV EAIAIAADGS IWTGSMNGVI AQWDGNGSRL REVNHHQQAV LCFCTFGDRI
0501: YVGYSSGYIQ VLDLGGKLIA SWVSHNEPVI KLAAGGGFIF SLATHGGVRG WYVTSPGPLD SLIRTELSQK EMAYARQDSV KILIGTWNVG EGRASRGALV
0601: SWLGSAVSDV GIVAIGLQEV DMGAGFLAMS TAKETVGVEG SAVGQWWLDA IGNALDERNT FERMGSRQLA GLLISLWVRK SIRTHVGDLD VAAVPCGFGR
0701: AIGNKGGVGL RIRVYDRIMC FVNCHLAAHL EAVTRRNADF NHIYRSMVFS KGQSVYTAAA AGASTSAQAL KNNPNTNNST EEEKSHLASA DLVAFFGDFN
0801: YRLFGITYDE ARDFISHRSF DWLREKDQLR QEMNEGKVFQ GMREALITFP PTYKFEKNKP GLGGYDSGEK KRIPAWCDRV IYRDNQSISY TECSLKCPVV
0901: SSTIMYEACM DVTESDHKPV RCKLHANIAH TDKSVRRQEL GKIVKSNEKL RAMFEELKSV PETSVSTNNI LLHSQDTFIF TIRNTSNSSR AIFNIVCKGQ
1001: TLVREDGEEP DNHSRGTFGL PRWLEVSPGA GIIKPDASLQ VKVHHEDSHN SEEFIDGIQQ NSLSEESSDK EVTLIIIVQG SCSTRTISHS IKVRHCSSAA
1101: KSLSLVHSKT TTMTKNLEGS TRYQTDANRG GSTRHRTDDS TRRG
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:UniProtKB/TrEMBL;Acc:F4IRT2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.