Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g014580.2.1 | Tomato | nucleus | 88.57 | 89.03 |
| PGSC0003DMT400052499 | Potato | nucleus | 71.13 | 71.88 |
| KRH01854 | Soybean | cytosol | 34.79 | 65.43 |
| KRH51310 | Soybean | cytosol | 61.25 | 64.58 |
| CDY47263 | Canola | plastid | 52.75 | 64.36 |
| Bra015445.1-P | Field mustard | plastid | 52.66 | 64.32 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 57.22 | 64.29 |
| CDY10132 | Canola | cytosol | 58.08 | 60.41 |
| CDY10014 | Canola | cytosol, plastid | 55.93 | 60.11 |
| KRH01856 | Soybean | cytosol | 26.55 | 59.88 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 52.41 | 59.75 |
| Bra030617.1-P | Field mustard | cytosol | 58.25 | 59.58 |
| CDY15548 | Canola | cytosol | 55.76 | 59.05 |
| CDX86567 | Canola | cytosol | 55.5 | 59.05 |
| Bra032456.1-P | Field mustard | cytosol | 56.7 | 58.88 |
| AT1G05630.1 | Thale cress | cytosol | 58.16 | 57.86 |
| CDY06178 | Canola | cytosol | 56.62 | 57.66 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 32.65 | 57.32 |
| CDY34516 | Canola | cytosol | 54.21 | 55.84 |
| PGSC0003DMT400070365 | Potato | cytosol | 12.63 | 55.47 |
| Bra005638.1-P | Field mustard | cytosol | 54.47 | 55.32 |
| CDY42072 | Canola | cytosol | 54.3 | 55.2 |
| Os09t0500300-01 | Rice | cytosol | 47.25 | 54.95 |
| AT2G31830.2 | Thale cress | cytosol | 54.98 | 54.56 |
| Bra000333.1-P | Field mustard | nucleus | 60.14 | 54.14 |
| CDX95575 | Canola | nucleus | 59.88 | 53.78 |
| Zm00001d028271_P001 | Maize | cytosol | 12.97 | 53.36 |
| GSMUA_Achr11P... | Banana | cytosol | 52.49 | 53.04 |
| AT2G43900.2 | Thale cress | nucleus | 61.0 | 52.67 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 18.73 | 52.66 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 20.7 | 52.28 |
| Os08t0524100-01 | Rice | nucleus | 48.8 | 51.31 |
| EES15333 | Sorghum | cytosol | 49.57 | 50.39 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 51.03 | 50.17 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 49.91 | 50.09 |
| Zm00001d021014_P001 | Maize | cytosol | 50.77 | 50.08 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 49.66 | 50.04 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 50.95 | 50.0 |
| Zm00001d006063_P002 | Maize | cytosol | 50.95 | 50.0 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 49.74 | 50.0 |
| KXG35959 | Sorghum | cytosol | 50.86 | 49.83 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 49.4 | 49.65 |
| Zm00001d031554_P003 | Maize | nucleus | 47.59 | 49.6 |
| Zm00001d049785_P003 | Maize | cytosol | 48.02 | 49.29 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 50.86 | 48.56 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 51.37 | 47.54 |
| PGSC0003DMT400043508 | Potato | cytosol | 7.47 | 27.1 |
Protein Annotations
| EntrezGene:102597555 | Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0046856 | InterPro:IPPc | InterPro:IPR000535 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR036691 | UniProt:M1CD59 | InterPro:MSP_dom | PFAM:PF03372 |
| EnsemblPlantsGene:PGSC0003DMG400025226 | PGSC:PGSC0003DMG400025226 | EnsemblPlants:PGSC0003DMT400064953 | PFscan:PS50202 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF137 |
| SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF56219 | UniParc:UPI0002961F66 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom_sf | RefSeq:XP_006351097.1 | SEG:seg | : | : |
Description
Endonuclease/exonuclease/phosphatase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400025226]
Coordinates
chr8:-:8040460..8046815
Molecular Weight (calculated)
128840.0 Da
IEP (calculated)
6.838
GRAVY (calculated)
-0.402
Length
1164 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDVVEKFEDD EKNALEGLTE APPPRRKAHS YSHQLRTNTG THHKRHHQVR NHSLDVDYMP NSINNSGLYE DSSDDDNEGF YPYSTNSNEI SCSSSSNNSS
0101: TTTTTTACAA AVSADRQDFH LMTQNFSGLG VIPDCLDDDQ QLPLPEFAAS GGGVGMFKLP TRAAVHPSRP SCHELRPHPL RETQVGRFLR TIACTDTQLW
0201: AGQECGVRVW NFSDQYEAGL GFNGRAKRGD EDAAPFYESV NTSPAICLIV DSGNKLVWSG HKDGKIRSWR MDQPNSDDSP FKEGLSWQAH RGSVLSMVIS
0301: SYGDIWSGSE GGVIKVWPWE SVEKSLSLSP EEKHMAALLV ERSAIDLRTL VTVNGVCNIS SSEVKCLLSD HVRAKVWAAG SLSFSLWDAR NRELLKVYNV
0401: EGQIENRVDI SSVQDQSTED DLNVKFVSKS KKEKSQGSSF LQRSRNAIMG AADAVRRVAT KGAFVEDSKK TEVLVLAADG MIWSGCSSGL LVQWDGNGNR
0501: LQDFHHHRCA VLCLCAHGSR IWVGYVSGMV QALDLDGNLL AGWVAHNGPV IKMAVGNDYV YSLANHGGIR GWNLTSPGPI DNILRPQLAE KENLYTSQEN
0601: VRVLIGTWNV GQGRASQEAL ATWLGSAVSD VGIIVVGLQE VEMGAGFLAM SAAKETVGLE GSSVGQWWQD AIGKALNEGS AFERVGSRQL AALLIAIWVR
0701: KSIRNHVGDL DVGAVACGIG RAIGNKGGVG LRLRVFDRIM CFTNCHFAAH LEAVNRRNAD FNHIFRTMVF TKSSSLLNNS VAGVSSSAQM LRGANTAQIN
0801: PDEGRPELGE ADLVIFTGDF NYRLFGISYD EARDFVSQRC FDWLREKDQL RAEMISGKVF QGMREAIIRF PPTYKFERGK PGLGGYDSGE KKRIPAWCDR
0901: VLYRDNRATP SVECSLQCPV VASIIQYEAC MEVTESDHKP VRCKFHVEIA HVDRSVRRQM FGDIFQNNEK VKSLLQEFRY IPETLVSTSQ IVLQNQDTYN
1001: LRISSRSRED KLFFQITCGG QSTIKEDEQA SEYHPRASFG FPRWLEVTPA SGIIKPDQAA EILVRHEEFN KLEETVDGIP QSWWCEDTRD KEVILLINVT
1101: ASRSTEARTH KVNVRHSFSA NAVRTTSKSS SRRSQGGSSH HRSALRHVGS GSESMTDHQS LRGP
0101: TTTTTTACAA AVSADRQDFH LMTQNFSGLG VIPDCLDDDQ QLPLPEFAAS GGGVGMFKLP TRAAVHPSRP SCHELRPHPL RETQVGRFLR TIACTDTQLW
0201: AGQECGVRVW NFSDQYEAGL GFNGRAKRGD EDAAPFYESV NTSPAICLIV DSGNKLVWSG HKDGKIRSWR MDQPNSDDSP FKEGLSWQAH RGSVLSMVIS
0301: SYGDIWSGSE GGVIKVWPWE SVEKSLSLSP EEKHMAALLV ERSAIDLRTL VTVNGVCNIS SSEVKCLLSD HVRAKVWAAG SLSFSLWDAR NRELLKVYNV
0401: EGQIENRVDI SSVQDQSTED DLNVKFVSKS KKEKSQGSSF LQRSRNAIMG AADAVRRVAT KGAFVEDSKK TEVLVLAADG MIWSGCSSGL LVQWDGNGNR
0501: LQDFHHHRCA VLCLCAHGSR IWVGYVSGMV QALDLDGNLL AGWVAHNGPV IKMAVGNDYV YSLANHGGIR GWNLTSPGPI DNILRPQLAE KENLYTSQEN
0601: VRVLIGTWNV GQGRASQEAL ATWLGSAVSD VGIIVVGLQE VEMGAGFLAM SAAKETVGLE GSSVGQWWQD AIGKALNEGS AFERVGSRQL AALLIAIWVR
0701: KSIRNHVGDL DVGAVACGIG RAIGNKGGVG LRLRVFDRIM CFTNCHFAAH LEAVNRRNAD FNHIFRTMVF TKSSSLLNNS VAGVSSSAQM LRGANTAQIN
0801: PDEGRPELGE ADLVIFTGDF NYRLFGISYD EARDFVSQRC FDWLREKDQL RAEMISGKVF QGMREAIIRF PPTYKFERGK PGLGGYDSGE KKRIPAWCDR
0901: VLYRDNRATP SVECSLQCPV VASIIQYEAC MEVTESDHKP VRCKFHVEIA HVDRSVRRQM FGDIFQNNEK VKSLLQEFRY IPETLVSTSQ IVLQNQDTYN
1001: LRISSRSRED KLFFQITCGG QSTIKEDEQA SEYHPRASFG FPRWLEVTPA SGIIKPDQAA EILVRHEEFN KLEETVDGIP QSWWCEDTRD KEVILLINVT
1101: ASRSTEARTH KVNVRHSFSA NAVRTTSKSS SRRSQGGSSH HRSALRHVGS GSESMTDHQS LRGP
0001: MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT2G43900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.