Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g019080.1.1 | Tomato | nucleus | 84.64 | 91.72 |
| PGSC0003DMT400064953 | Potato | cytosol | 71.88 | 71.13 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 57.47 | 63.9 |
| KRH51310 | Soybean | cytosol | 61.02 | 63.68 |
| KRH01854 | Soybean | cytosol | 33.68 | 62.68 |
| CDY47263 | Canola | plastid | 51.04 | 61.64 |
| Bra015445.1-P | Field mustard | plastid | 50.87 | 61.49 |
| KRH01856 | Soybean | cytosol | 27.0 | 60.27 |
| CDY10014 | Canola | cytosol, plastid | 55.21 | 58.73 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 33.33 | 57.92 |
| Bra032456.1-P | Field mustard | cytosol | 55.99 | 57.54 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 50.95 | 57.49 |
| CDY10132 | Canola | cytosol | 55.73 | 57.37 |
| Bra030617.1-P | Field mustard | cytosol | 56.08 | 56.77 |
| AT1G05630.1 | Thale cress | cytosol | 57.38 | 56.5 |
| CDY15548 | Canola | cytosol | 53.82 | 56.41 |
| CDX86567 | Canola | cytosol | 53.47 | 56.31 |
| CDY06178 | Canola | cytosol | 55.64 | 56.08 |
| Zm00001d028271_P001 | Maize | cytosol | 13.63 | 55.48 |
| PGSC0003DMT400070365 | Potato | cytosol | 12.59 | 54.72 |
| CDY34516 | Canola | cytosol | 53.65 | 54.69 |
| CDY42072 | Canola | cytosol | 54.08 | 54.41 |
| Bra005638.1-P | Field mustard | cytosol | 53.91 | 54.19 |
| AT2G31830.2 | Thale cress | cytosol | 54.6 | 53.62 |
| Os09t0500300-01 | Rice | cytosol | 46.53 | 53.55 |
| Bra000333.1-P | Field mustard | nucleus | 59.55 | 53.05 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 19.01 | 52.9 |
| CDX95575 | Canola | nucleus | 59.46 | 52.85 |
| AT2G43900.2 | Thale cress | nucleus | 60.85 | 52.0 |
| GSMUA_Achr11P... | Banana | cytosol | 51.82 | 51.82 |
| Os08t0524100-01 | Rice | nucleus | 48.44 | 50.41 |
| EES15333 | Sorghum | cytosol | 49.57 | 49.87 |
| Zm00001d021014_P001 | Maize | cytosol | 51.04 | 49.83 |
| Zm00001d006063_P002 | Maize | cytosol | 51.22 | 49.75 |
| KXG35959 | Sorghum | cytosol | 51.22 | 49.66 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 19.79 | 49.46 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 50.35 | 48.99 |
| Zm00001d049785_P003 | Maize | cytosol | 47.92 | 48.68 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 50.09 | 48.65 |
| Zm00001d031554_P003 | Maize | nucleus | 47.05 | 48.52 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 48.26 | 48.14 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 48.44 | 48.1 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 48.26 | 48.01 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 48.18 | 47.93 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 50.0 | 47.25 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 50.52 | 46.26 |
| PGSC0003DMT400043508 | Potato | cytosol | 7.64 | 27.41 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:27.5.4.2 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0046856 | InterPro:IPPc | InterPro:IPR000535 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | InterPro:IPR036691 | UniProt:M1BTI6 | InterPro:MSP_dom | PFAM:PF03372 | EnsemblPlantsGene:PGSC0003DMG400020375 |
| PGSC:PGSC0003DMG400020375 | EnsemblPlants:PGSC0003DMT400052499 | PFscan:PS50202 | PFscan:PS50294 | PANTHER:PTHR11200 | PANTHER:PTHR11200:SF137 |
| SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF50978 | SUPFAM:SSF56219 | UniParc:UPI0002967402 | InterPro:WD40/YVTN_repeat-like_dom_sf |
| InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : |
Description
Endonuclease/exonuclease/phosphatase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400020375]
Coordinates
chr12:-:12183735..12190583
Molecular Weight (calculated)
127580.0 Da
IEP (calculated)
6.955
GRAVY (calculated)
-0.438
Length
1152 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDEKFEEDE KKALEGLSNA PITPRKKVHS YSHQLRTNTG THHKRYHQFR HHSFDIPTNF IDNNNNNDHH GLIYNDEDSS DDEDFYPYST YSNASITTTA
0101: AGAGQVFDAG NFGPAVAEDE GIDQQRPLPE FVGGGGGVGI FKVPTRASVH PSRPSCHELR PHPLRETQVG KFLRTIACTE TQLWAGLECG IRVWNFSDQY
0201: KSGMGIGERA RRGDEDAAPF HESTSTSPTL CLMVDSGSRL IWSGHKDGKI RSWKMDQSNE STFKEGLSWQ AHRGSVLSMV MSSYGDIWSG SEGGNIRVWP
0301: WESIDKSLSL SPEERHMAAL LVERSIVDLK SQVTVNGVCN ISSSDVKCLL SDHVRAKVWA AGSASFSLWD ARTRELLKVY NAEGQIENRG DMSSVQDQAT
0401: EDEMNAKVAS KPKKEKSQGS SFLQRSRNAI MGAAEAVRRV ASKGAGAFAE DSKKTEALVL AADGMIWSGC SNGLLVHWDG NGNRLQDFHH HPCAVLSLCA
0501: HGSRIWVGYI SGMVQMLDLE GNLLVGWVAH NGPVVKMVVG DNYLFSLATH GGIRGWSLVS PGPIDNIIRP ELAEKEHLYT RKEDFRILVG TWNVGQGRVS
0601: QEALAAWLGS TVSDVGIVVV GLQEVEMGAG FLAMSAAKES VGLEGSAMGQ WWQDAIGKAL DEGSTFERVG SRQLAALLIA IWVRKSLRNH VGDLDVGAVA
0701: CGLGRAIGNK GGVGLRLRVF DRIMCFVNCH LAAHLEAITR RNADFDHIYR TMSFTRSSNL LNNASVGVSS AAQVLRVTPS HLQQAAAINP DEGKPDLAEA
0801: DMVIFFGDFN YRLFGISYDE ARDFVSQRSF DWLRERDQLR AEMKTGKVFQ GMREAIIKFP PTYKFERGKP GLGGYDSGEK KRIPAWCDRV LYRDSRTSPT
0901: VECSLGCPVV ASIIQYEGCM EVTESDHKPV RCKFNIELAH IDRSVRRQEF GKVFQNNDRI RSVLNELRYV PETNISTSQI VLQNNDTFSL QISNKSREDR
1001: VLFQITCSAQ STIKEDRQAS EYHPRGSLGF PRWLEVTPAA GIIKPDQAAE ILVQHEDSQS LEDSVDGTPL SRWSEDTINK EVTLMIFIKA SQSTEARTYQ
1101: VHVRHSFSAD ALSVNSKNTG RSNEGSSHHR STLKHAGSTS NKKKDHQNIR VP
0101: AGAGQVFDAG NFGPAVAEDE GIDQQRPLPE FVGGGGGVGI FKVPTRASVH PSRPSCHELR PHPLRETQVG KFLRTIACTE TQLWAGLECG IRVWNFSDQY
0201: KSGMGIGERA RRGDEDAAPF HESTSTSPTL CLMVDSGSRL IWSGHKDGKI RSWKMDQSNE STFKEGLSWQ AHRGSVLSMV MSSYGDIWSG SEGGNIRVWP
0301: WESIDKSLSL SPEERHMAAL LVERSIVDLK SQVTVNGVCN ISSSDVKCLL SDHVRAKVWA AGSASFSLWD ARTRELLKVY NAEGQIENRG DMSSVQDQAT
0401: EDEMNAKVAS KPKKEKSQGS SFLQRSRNAI MGAAEAVRRV ASKGAGAFAE DSKKTEALVL AADGMIWSGC SNGLLVHWDG NGNRLQDFHH HPCAVLSLCA
0501: HGSRIWVGYI SGMVQMLDLE GNLLVGWVAH NGPVVKMVVG DNYLFSLATH GGIRGWSLVS PGPIDNIIRP ELAEKEHLYT RKEDFRILVG TWNVGQGRVS
0601: QEALAAWLGS TVSDVGIVVV GLQEVEMGAG FLAMSAAKES VGLEGSAMGQ WWQDAIGKAL DEGSTFERVG SRQLAALLIA IWVRKSLRNH VGDLDVGAVA
0701: CGLGRAIGNK GGVGLRLRVF DRIMCFVNCH LAAHLEAITR RNADFDHIYR TMSFTRSSNL LNNASVGVSS AAQVLRVTPS HLQQAAAINP DEGKPDLAEA
0801: DMVIFFGDFN YRLFGISYDE ARDFVSQRSF DWLRERDQLR AEMKTGKVFQ GMREAIIKFP PTYKFERGKP GLGGYDSGEK KRIPAWCDRV LYRDSRTSPT
0901: VECSLGCPVV ASIIQYEGCM EVTESDHKPV RCKFNIELAH IDRSVRRQEF GKVFQNNDRI RSVLNELRYV PETNISTSQI VLQNNDTFSL QISNKSREDR
1001: VLFQITCSAQ STIKEDRQAS EYHPRGSLGF PRWLEVTPAA GIIKPDQAAE ILVQHEDSQS LEDSVDGTPL SRWSEDTINK EVTLMIFIKA SQSTEARTYQ
1101: VHVRHSFSAD ALSVNSKNTG RSNEGSSHHR STLKHAGSTS NKKKDHQNIR VP
0001: MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT2G43900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.