CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25380_001	Banana	cytosol, nucleus, peroxisome	51.7	48.27
KRH51310	Soybean	cytosol	84.49	47.37
Zm00001d002647_P001	Maize	cytosol, endoplasmic reticulum, plastid	26.98	40.34
Solyc12g019080.1.1	Tomato	nucleus	62.2	36.22
PGSC0003DMT400064953	Potato	cytosol	65.43	34.79
Solyc08g014580.2.1	Tomato	nucleus	64.62	34.54
VIT_05s0094g01330.t01	Wine grape	cytosol	56.87	33.98
CDY10132	Canola	cytosol	61.39	33.96
Bra032456.1-P	Field mustard	cytosol	61.39	33.9
PGSC0003DMT400052499	Potato	nucleus	62.68	33.68
CDY10014	Canola	cytosol, plastid	58.48	33.43
Bra030617.1-P	Field mustard	cytosol	61.39	33.39
Zm00001d028271_P001	Maize	cytosol	15.19	33.22
AT1G05630.1	Thale cress	cytosol	62.68	33.16
CDY06178	Canola	cytosol	60.58	32.81
CDX86567	Canola	cytosol	57.35	32.45
CDY15548	Canola	cytosol	57.03	32.12
CDY34516	Canola	cytosol	58.48	32.04
CDY42072	Canola	cytosol	58.64	31.7
Bra005638.1-P	Field mustard	cytosol	58.64	31.68
CDY47263	Canola	plastid	48.79	31.66
AT2G31830.2	Thale cress	cytosol	59.77	31.54
Bra015445.1-P	Field mustard	plastid	48.3	31.37
Solyc12g096660.1.1	Tomato	cytosol	59.45	30.87
GSMUA_AchrUn_...	Banana	mitochondrion	50.73	30.75
KRH34234	Soybean	cytosol	53.47	30.09
Bra000333.1-P	Field mustard	nucleus	61.55	29.47
CDX95575	Canola	nucleus	61.23	29.24
KRG92557	Soybean	golgi, plasma membrane	53.15	28.78
AT2G43900.2	Thale cress	nucleus	62.2	28.56
GSMUA_Achr11P...	Banana	cytosol	52.34	28.12
Os08t0524100-01	Rice	nucleus	47.66	26.65
Zm00001d031554_P003	Maize	nucleus	47.66	26.41
EES15333	Sorghum	cytosol	48.47	26.2
Zm00001d021014_P001	Maize	cytosol	48.95	25.68
Zm00001d049785_P003	Maize	cytosol	46.69	25.48
TraesCS7B01G151900.2	Wheat	nucleus	47.5	25.45
TraesCS5A01G278100.1	Wheat	nucleus	48.63	25.42
HORVU7Hr1G052740.2	Barley	cytosol	47.5	25.39
KXG35959	Sorghum	cytosol	48.63	25.34
Os09t0500300-01	Rice	cytosol	40.87	25.27
TraesCS7D01G253900.2	Wheat	nucleus	47.17	25.22
TraesCS5B01G277500.1	Wheat	nucleus	48.3	25.21
Zm00001d006063_P002	Maize	cytosol	48.3	25.21
TraesCS7A01G255500.2	Wheat	cytosol	46.85	25.0
TraesCS5D01G285100.2	Wheat	nucleus	48.47	24.61
HORVU5Hr1G075330.2	Barley	mitochondrion, plastid	48.79	24.01
KRH15266	Soybean	extracellular, golgi, mitochondrion	3.72	5.96
KRH05773	Soybean	mitochondrion	2.75	5.23
GSMUA_Achr5P25370_001	Banana	extracellular, vacuole	0.48	0.65
KRH01856	Soybean	cytosol	0.16	0.19

Protein Annotations

Gene3D:2.130.10.10	MapMan:27.5.4.2	Gene3D:3.60.10.10	UniProt:A0A0R0F6C9	EMBL:ACUP02010286	InterPro:Endo/exonu/phosph_ase_sf
EnsemblPlantsGene:GLYMA_17G0006002	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001680	InterPro:IPR015943
InterPro:IPR017986	InterPro:IPR036691	EnsemblPlants:KRH01854	ProteinID:KRH01854	ProteinID:KRH01854.1	ProteinID:KRH01855.1
PFscan:PS50294	PANTHER:PTHR11200	PANTHER:PTHR11200:SF137	SMART:SM00320	SUPFAM:SSF50978	SUPFAM:SSF56219
UniParc:UPI0006ED50D3	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg

Description

hypothetical protein

Coordinates

chr17:+:46218..48463

Molecular Weight (calculated)

68056.2 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.349

Length

619 amino acids

Sequence
(BLAST)

001: MDDRIDEDEK EKEKEESLAG LTSLPPHRKA HSYSQQLRGT STHKRHHHVR KHSLDDSRIS SSIEASFYDP SDDDDIFSRS SSTNNPGAEE EYNEGADSTT
101: QYQPLQEFIG SGGGTGVFKP PFRASVHPGR PPFLELRPHP LRETQVGKFL RNIACTETQL WAGQESGVRV WEIQNAYEPG NGLGGKVRRG DEDAAPFFES
201: LDTSPTLCLA VDNGNRLVWS GHKDGKIRSW KMDQRFATPF KEGLSWQAHR GPVLAIVFSS YGDLWSGSEG GIIKIWPWES VAKSLSLSPE ERHMAALLVE
301: RSFIDLRAQV TVNGVCSISS QEVKSLLCDH VRGRVWCAGP LSFSLWDAHT KELLKVFNIE GQVENRVDMS SVQQQDQAVE DEMKVKFVST SKKEKSQGTS
401: FLQRSRNAIM GAADAVRRVA TKGAGAFVED TKRTEALVQT GDGMIWSGCS NGLLVQWDGT GTRVQDFNRH PCAVQCFCTF GTRLYVGYVS GIIQVLDLEG
501: NLVAAWVAHN GPVIKLAVGC DYVFSLATHG GLRGWIIASP GPVDNIIRSE LATKEFIYTR LHNVRILIGT WNVGQGRASQ GSLSSWLGSI ASDVGIIVVG
601: LQEVEMGAGF LAMSAAKET

Best Arabidopsis Sequence Match ( AT1G05630.1 )
(BLAST)

0001: MDSLIIEEED EEALATLVPV PPRRKTHSYS LQFDHKPHHQ IRKHSLDEVP RSATLASEAV YFDSSDDEFS TGGNITENAA DETNAGAEEY TIVNPPPNVG
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR

Arabidopsis Description

AT5PTASE13Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT1G05630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.