Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5D01G285100.2 | Wheat | nucleus | 99.24 | 96.39 |
TraesCS5B01G277500.1 | Wheat | nucleus | 95.95 | 95.78 |
HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 96.54 | 90.86 |
Os09t0500300-01 | Rice | cytosol | 74.41 | 88.01 |
Zm00001d006063_P002 | Maize | cytosol | 82.52 | 82.38 |
Zm00001d021014_P001 | Maize | cytosol | 81.84 | 82.12 |
KXG35959 | Sorghum | cytosol | 82.18 | 81.9 |
TraesCS7A01G255500.2 | Wheat | cytosol | 67.48 | 68.88 |
GSMUA_AchrUn_... | Banana | mitochondrion | 54.31 | 62.98 |
GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 35.05 | 62.59 |
VIT_00s0220g00160.t01 | Wine grape | cytosol | 41.72 | 59.45 |
GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 22.72 | 58.35 |
GSMUA_Achr11P... | Banana | cytosol | 55.24 | 56.77 |
CDY47263 | Canola | plastid | 45.27 | 56.18 |
Bra015445.1-P | Field mustard | plastid | 45.19 | 56.14 |
VIT_05s0094g01330.t01 | Wine grape | cytosol | 48.23 | 55.12 |
KRH01856 | Soybean | cytosol | 23.82 | 54.65 |
PGSC0003DMT400070365 | Potato | cytosol | 11.91 | 53.21 |
KRH51310 | Soybean | cytosol | 49.24 | 52.81 |
CDY07455 | Canola | cytosol | 42.15 | 52.64 |
CDY10132 | Canola | cytosol | 49.75 | 52.64 |
KRH34234 | Soybean | cytosol | 48.73 | 52.45 |
CDY10014 | Canola | cytosol, plastid | 47.89 | 52.35 |
CDY39279 | Canola | cytosol | 42.57 | 51.96 |
Solyc08g014580.2.1 | Tomato | nucleus | 50.68 | 51.81 |
AT1G65580.1 | Thale cress | nucleus | 48.14 | 51.77 |
Solyc12g019080.1.1 | Tomato | nucleus | 46.28 | 51.55 |
CDY15548 | Canola | cytosol | 47.8 | 51.5 |
CDX86567 | Canola | cytosol | 47.47 | 51.37 |
Bra030617.1-P | Field mustard | cytosol | 49.24 | 51.23 |
Bra032456.1-P | Field mustard | cytosol | 48.48 | 51.2 |
KRG92557 | Soybean | golgi, plasma membrane | 49.32 | 51.09 |
PGSC0003DMT400064953 | Potato | cytosol | 50.17 | 51.03 |
PGSC0003DMT400052499 | Potato | nucleus | 48.99 | 50.35 |
Bra004120.1-P | Field mustard | nucleus | 47.64 | 50.31 |
Solyc11g008800.1.1 | Tomato | cytosol | 49.07 | 50.22 |
AT1G05630.1 | Thale cress | cytosol | 49.49 | 50.09 |
CDY06178 | Canola | cytosol | 48.23 | 49.96 |
CDY34516 | Canola | cytosol | 46.79 | 49.03 |
Bra005638.1-P | Field mustard | cytosol | 47.38 | 48.95 |
KRH01854 | Soybean | cytosol | 25.42 | 48.63 |
CDY42072 | Canola | cytosol | 46.96 | 48.56 |
TraesCS4A01G082700.1 | Wheat | cytosol | 43.58 | 47.91 |
Solyc12g096660.1.1 | Tomato | cytosol | 47.89 | 47.57 |
AT2G31830.2 | Thale cress | cytosol | 46.96 | 47.4 |
Bra000333.1-P | Field mustard | nucleus | 48.31 | 44.24 |
CDX95575 | Canola | nucleus | 48.06 | 43.9 |
AT2G43900.2 | Thale cress | nucleus | 49.66 | 43.62 |
TraesCS4A01G244500.1 | Wheat | cytosol | 8.78 | 30.86 |
Protein Annotations
Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
GO:GO:0046856 | InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR036691 | PFAM:PF03372 |
PANTHER:PTHR11200 | PANTHER:PTHR11200:SF145 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 |
EnsemblPlantsGene:TraesCS5A01G278100 | EnsemblPlants:TraesCS5A01G278100.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | TIGR:cd09074 | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:487838804..487844991
Molecular Weight (calculated)
129234.0 Da
IEP (calculated)
6.827
GRAVY (calculated)
-0.376
Length
1184 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEPDDEALKE LAAASSRPPQ RRGISYSQPL SRGDTASARR AALRNLSLDD DHVLPASHSL SYAHHDPSAG VPAGYHPPLP PQQQHHHHPS ASYSSGPSSR
0101: RSVGGASDGS MTLERAMSEY GGGAGTLPEF VGAGGGKGIF RVPLRAAMHP HRPPPLEVRP HPLRETQAGS FLRTLASDPQ RRQLWAGAES GIRVWALDEV
0201: FAGWGAGARR GDEESAPFRE GVPAPPALCV AMDRANGLLW TGHKDGRIRS WRMDLETAAT APAPPPPGSG GEGSVGGSAH GGPNSAPVFR EALTWQAYGR
0301: TPVLSMAITS YGEIWSGSEG GVIKAWPYDA IAKSLSLSPE ERHMAALLVE RAYIDLRNHC TVGNVCSLPA SDVKYMLADH SRAKVWTLTS MTFALWDART
0401: RELLKVFGMD GQVESARLDT PVMPEQPMEE VEVKVKPSKK DKSGGSLNFF QKSRNALMGA ADAVRRVATK GTFVEDNRRT GAVAQADDGA IWSGCTNGCI
0501: IQWDGNGNRM QEFQHHTSSV QCIKALGDRV WVGYASGTVQ VMDVDGNLLA GWTGHSCPVI RMAIGGSYIY TLAHHGGIRG WPLTSPGPLD DVLRTELANK
0601: ELSYTRMEKI NIMVGSWNVA QGKATAESLK AWLGSVASDV GLVVVGLQEV EMGAGFLAIS AAKETVGLEG SANGQWWIDN IGKALDEGTS FHRVGSRQLA
0701: ALLIAAWARK SLKPYVGDVE AAAVPCGLGR AIGNKGGVGL RIRVYDRKMC FVSNHFAAHL EAVARRNADF DHIYRTMAFN KPHGSTSSAT SVQLHRTVNV
0801: NGNPVDEVRP DLADADMVVF LGDFNYRLYG ITYDEARDMV SQRSFDWLRE KDQLRAEMKA GKVFQGMREG LIKFPPTYKF QKHAPGLGGY DSGEKKRIPA
0901: WCDRVLYRDS RAVSVAECSL ECPVVAAITS YVAVMEVTES DHKPVRCTFS VDIARVDELT RRQEYGEIIE SNEEVRSMLK ESCFVPDSTV STEEIILENQ
1001: ENIVFQITNN CETSKAAFEI LCEGQSTKKD DGTKPEIIPR ASFGFPLWLE VLPANGLIKP GETVDITIHH EDFYTQEEFV DGIPQNWWCE DTRDKEAVIM
1101: VNITGSTSTE TKTHMINVRH RCPATSAPPP INPPVTLTPP SNNMPSEALT KRSSKKKEAS RQQQQDYAQF ASAEVHDLYR MRCP
0101: RSVGGASDGS MTLERAMSEY GGGAGTLPEF VGAGGGKGIF RVPLRAAMHP HRPPPLEVRP HPLRETQAGS FLRTLASDPQ RRQLWAGAES GIRVWALDEV
0201: FAGWGAGARR GDEESAPFRE GVPAPPALCV AMDRANGLLW TGHKDGRIRS WRMDLETAAT APAPPPPGSG GEGSVGGSAH GGPNSAPVFR EALTWQAYGR
0301: TPVLSMAITS YGEIWSGSEG GVIKAWPYDA IAKSLSLSPE ERHMAALLVE RAYIDLRNHC TVGNVCSLPA SDVKYMLADH SRAKVWTLTS MTFALWDART
0401: RELLKVFGMD GQVESARLDT PVMPEQPMEE VEVKVKPSKK DKSGGSLNFF QKSRNALMGA ADAVRRVATK GTFVEDNRRT GAVAQADDGA IWSGCTNGCI
0501: IQWDGNGNRM QEFQHHTSSV QCIKALGDRV WVGYASGTVQ VMDVDGNLLA GWTGHSCPVI RMAIGGSYIY TLAHHGGIRG WPLTSPGPLD DVLRTELANK
0601: ELSYTRMEKI NIMVGSWNVA QGKATAESLK AWLGSVASDV GLVVVGLQEV EMGAGFLAIS AAKETVGLEG SANGQWWIDN IGKALDEGTS FHRVGSRQLA
0701: ALLIAAWARK SLKPYVGDVE AAAVPCGLGR AIGNKGGVGL RIRVYDRKMC FVSNHFAAHL EAVARRNADF DHIYRTMAFN KPHGSTSSAT SVQLHRTVNV
0801: NGNPVDEVRP DLADADMVVF LGDFNYRLYG ITYDEARDMV SQRSFDWLRE KDQLRAEMKA GKVFQGMREG LIKFPPTYKF QKHAPGLGGY DSGEKKRIPA
0901: WCDRVLYRDS RAVSVAECSL ECPVVAAITS YVAVMEVTES DHKPVRCTFS VDIARVDELT RRQEYGEIIE SNEEVRSMLK ESCFVPDSTV STEEIILENQ
1001: ENIVFQITNN CETSKAAFEI LCEGQSTKKD DGTKPEIIPR ASFGFPLWLE VLPANGLIKP GETVDITIHH EDFYTQEEFV DGIPQNWWCE DTRDKEAVIM
1101: VNITGSTSTE TKTHMINVRH RCPATSAPPP INPPVTLTPP SNNMPSEALT KRSSKKKEAS RQQQQDYAQF ASAEVHDLYR MRCP
0001: MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR
Arabidopsis Description
Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT2G43900]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.