CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25370_001	Banana	extracellular, vacuole	48.45	54.23
KRH51310	Soybean	cytosol	87.6	40.94
CDY47263	Canola	plastid	63.18	34.17
Bra015445.1-P	Field mustard	plastid	62.6	33.89
VIT_05s0094g01330.t01	Wine grape	cytosol	66.67	33.2
GSMUA_AchrUn_...	Banana	mitochondrion	60.66	30.66
AT1G05630.1	Thale cress	cytosol	68.41	30.17
CDY06178	Canola	cytosol	65.7	29.66
CDY10132	Canola	cytosol	62.79	28.95
CDY10014	Canola	cytosol, plastid	60.66	28.9
CDY15548	Canola	cytosol	61.24	28.75
CDX86567	Canola	cytosol	60.85	28.7
Os09t0500300-01	Rice	cytosol	55.43	28.57
Bra032456.1-P	Field mustard	cytosol	61.43	28.28
Bra030617.1-P	Field mustard	cytosol	61.24	27.77
KRH34234	Soybean	cytosol	58.53	27.45
PGSC0003DMT400052499	Potato	nucleus	60.27	27.0
Solyc08g014580.2.1	Tomato	nucleus	60.27	26.86
KRG92557	Soybean	golgi, plasma membrane	58.91	26.6
Solyc12g096660.1.1	Tomato	cytosol	61.43	26.59
CDY34516	Canola	cytosol	58.14	26.55
PGSC0003DMT400064953	Potato	cytosol	59.88	26.55
Solyc12g019080.1.1	Tomato	nucleus	54.26	26.34
CDY42072	Canola	cytosol	57.95	26.11
Bra005638.1-P	Field mustard	cytosol	57.95	26.09
GSMUA_Achr11P...	Banana	cytosol	58.14	26.04
Bra000333.1-P	Field mustard	nucleus	64.53	25.75
AT2G31830.2	Thale cress	cytosol	58.14	25.58
CDX95575	Canola	nucleus	64.15	25.54
AT2G43900.2	Thale cress	nucleus	66.28	25.37
Os08t0524100-01	Rice	nucleus	53.1	24.75
EES15333	Sorghum	cytosol	54.46	24.54
KXG35959	Sorghum	cytosol	56.01	24.33
Zm00001d021014_P001	Maize	cytosol	55.23	24.15
Zm00001d006063_P002	Maize	cytosol	55.43	24.11
Zm00001d049785_P003	Maize	cytosol	52.71	23.99
TraesCS5A01G278100.1	Wheat	nucleus	54.65	23.82
TraesCS5B01G277500.1	Wheat	nucleus	54.46	23.69
TraesCS7D01G253900.2	Wheat	nucleus	52.71	23.49
TraesCS7B01G151900.2	Wheat	nucleus	52.33	23.38
TraesCS7A01G255500.2	Wheat	cytosol	52.52	23.36
HORVU7Hr1G052740.2	Barley	cytosol	52.13	23.23
TraesCS5D01G285100.2	Wheat	nucleus	54.65	23.13
Zm00001d031554_P003	Maize	nucleus	50.0	23.1
HORVU5Hr1G075330.2	Barley	mitochondrion, plastid	54.84	22.5
KRH05773	Soybean	mitochondrion	12.6	20.0
Zm00001d028271_P001	Maize	cytosol	10.85	19.79
KRH15266	Soybean	extracellular, golgi, mitochondrion	13.76	18.39
Zm00001d002647_P001	Maize	cytosol, endoplasmic reticulum, plastid	10.27	12.8
GSMUA_Achr5P25380_001	Banana	cytosol, nucleus, peroxisome	12.21	9.5
KRH01854	Soybean	cytosol	0.19	0.16

Protein Annotations

MapMan:27.5.4.2	Gene3D:3.60.10.10	UniProt:A0A0R0F693	EMBL:ACUP02010287	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase
EnsemblPlantsGene:GLYMA_17G0006001	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0046856
InterPro:IPPc	InterPro:IPR000535	InterPro:IPR036691	EnsemblPlants:KRH01856	ProteinID:KRH01856	ProteinID:KRH01856.1
InterPro:MSP_dom	PFAM:PF03372	PFscan:PS50202	PANTHER:PTHR11200	PANTHER:PTHR11200:SF137	SMART:SM00128
SUPFAM:SSF56219	TMHMM:TMhelix	UniParc:UPI0006EDF727	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:63241..67789

Molecular Weight (calculated)

57774.2 Da

IEP (calculated)

8.088

GRAVY (calculated)

-0.231

Length

516 amino acids

Sequence
(BLAST)

001: VGLEGSAMGQ WWLDTIGKAL QEGKAFERMG SRQLAGLLVS LWVRKNLRTH VGDIDAGAVP CGFGRAIGNK GGVGLRIRVY DRIMCFVNCH LAAHLEAVNR
101: RNADFDHIYR NMVFTRSSNL LNTAAGMVPY LFLLCSLAFS TYLFWLLYSS GLPLVLSVTA GVSTSVHVLR GTNVMGVISE EPKPDLSEAD MVVFFGDFNY
201: RLFGISYDEA RDFVSQRCFD WLREKDQLRA EMKAGKVFQG MREALIKFPP TYKFERHQPG LGGYDSGEKK RIPAWCDRII YRDTRSAPVS ECNLDCPVVS
301: SILQYDACMD VTDSDHKPVR CKFNVKISHV DRSVRRKEFG VVMTSSEKIR SILEDLCYVP EATVSPNSLV LQNLDTSMLL ITNRSTKDKA IYKITCEGQS
401: IVKNDGQAPD YSPRGGFGFP RWLEVTPAAG IIKPEQSVEV SVRHEDLHPS EESANGIPQN WWNEDTRDKE VILVVHVQGS SSVQTSCQQI HVRHCISAKT
501: VQIDSKSNGA RRNQIS

Best Arabidopsis Sequence Match ( AT1G05630.1 )
(BLAST)

0001: MDSLIIEEED EEALATLVPV PPRRKTHSYS LQFDHKPHHQ IRKHSLDEVP RSATLASEAV YFDSSDDEFS TGGNITENAA DETNAGAEEY TIVNPPPNVG
0101: LGDDDTEPLP EFIGAGGGSG IFKVPVRAAV HPGRPPCLEL RPHPLRETQT GRFLRNIACT ETQLWAGQEN GIRFWNLEDA YEAGCGIGGQ VPRGDEDTAP
0201: FHESVTTSPT MCLVADQSNK LLWSGHKDGK IRAWKMDQSS VSHDDDDSDP FKERVSWLAH RGPVNSIVIS SYGDMWSCSE GGVIKIWPWD TLEKSLLLKP
0301: EEKHMAALLV ERSAIDLRSQ VTVNGTCSIS SSEVKFLLAD SVRAKVWAVQ SLSFSIWDAR SKDLLKVLNV DGQVENRGDL PPIQDQQVDD EMKLKFFSAS
0401: KREKPQGFLQ RSRNAIMGAA GAVRRVATRS AGAFSEDTRK TEAIVLAVDG TIWTGSISGL IVQWDGNGNR LRDVNHHHRP VLCFCTFGDR IYVGYASGYI
0501: QVLDLDGKLI SSWVSHNEPV IKLAAGGGFI FSLATHGGVR GWYVTSPGPL DNIIRTELSQ KETLYARQDN VRILIGTWNV GQGRASHDAL MSWLGSVTSD
0601: VGIVAVGLQE VEMGAGFLAM SAAKETVGLE GSAVGQWWID AIGKALDEKN TFERMGSRQL AGLLISLWAR KDIRTHVGDL DVAAVPCGFG RAIGNKGGVG
0701: LRIRVYDRIM CFVNCHLAAH LEAVNRRNAD FNHIFRLMVF SRGQNLSNAA AGMVPYLFLS CSLGFSTYLF WLLYSSGLPW ALSLAAGVST SAYTTKSNTI
0801: PSTGAEEIKS DLAAADMVAF FGDFNYRLFG ITYDEARDFI SQRSFDWLRE RDQLRAEMKV GKVFQGMREA LITFPPTYKF ERNRSGLGGY DSGEKKRIPA
0901: WCDRVIYRDT QSSPFSESNL QCPVVSSVIM YEACMDVTES DHKPVRCKFH ATIAHVDKSV RRQELGKIIR SNEKILSIFE DLRFVPETSV STNNIVLQSQ
1001: DTVILTITNN SPTSQAIFNI LCGGQAVVKD DGEDADYNPR GSFGLPRWLE VSPAAGIINP EGSVDVKVHH EDFYSMEEYV DGIPQNWWCE DTRDKEAILM
1101: VNIRGSCSTT LRSHSVKVRH CFSARVCLLE NRPTNLTKNL GGSRRYPTDI TRNGSTRPRT EDSVRRGKSR

Arabidopsis Description

AT5PTASE13Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT1G05630]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.