Factsheet for HORVU5Hr1G075330.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid, mitochondrion

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G278100.1	Wheat	nucleus	90.86	96.54
TraesCS5D01G285100.2	Wheat	nucleus	90.7	93.6
TraesCS5B01G277500.1	Wheat	nucleus	88.08	93.42
Os09t0500300-01	Rice	cytosol	70.59	88.71
Zm00001d006063_P002	Maize	cytosol	77.98	82.72
KXG35959	Sorghum	cytosol	77.82	82.41
Zm00001d021014_P001	Maize	cytosol	77.27	82.37
HORVU7Hr1G052740.2	Barley	cytosol	63.83	69.34
GSMUA_AchrUn_...	Banana	mitochondrion	51.27	63.17
GSMUA_Achr5P25380_001	Banana	cytosol, nucleus, peroxisome	32.67	61.99
VIT_00s0220g00160.t01	Wine grape	cytosol	39.83	60.29
GSMUA_Achr5P25370_001	Banana	extracellular, vacuole	21.54	58.79
GSMUA_Achr11P...	Banana	cytosol	51.59	56.34
CDY47263	Canola	plastid	42.45	55.97
Bra015445.1-P	Field mustard	plastid	42.37	55.93
VIT_05s0094g01330.t01	Wine grape	cytosol	45.39	55.12
KRH01856	Soybean	cytosol	22.5	54.84
PGSC0003DMT400070365	Potato	cytosol	11.29	53.58
KRH51310	Soybean	cytosol	46.5	52.99
CDY07455	Canola	cytosol	39.83	52.85
KRH34234	Soybean	cytosol	46.1	52.73
CDY10132	Canola	cytosol	46.66	52.46
CDY39279	Canola	cytosol	40.3	52.27
CDY10014	Canola	cytosol, plastid	44.99	52.26
Solyc08g014580.2.1	Tomato	nucleus	48.01	52.16
AT1G65580.1	Thale cress	nucleus	45.47	51.95
Solyc12g019080.1.1	Tomato	nucleus	43.8	51.83
PGSC0003DMT400064953	Potato	cytosol	47.54	51.37
KRG92557	Soybean	golgi, plasma membrane	46.58	51.27
Bra032456.1-P	Field mustard	cytosol	45.63	51.2
CDX86567	Canola	cytosol	44.44	51.1
CDY15548	Canola	cytosol	44.59	51.05
Bra030617.1-P	Field mustard	cytosol	45.95	50.79
PGSC0003DMT400052499	Potato	nucleus	46.26	50.52
Solyc11g008800.1.1	Tomato	cytosol	46.42	50.48
Bra004120.1-P	Field mustard	nucleus	44.83	50.31
CDY06178	Canola	cytosol	45.31	49.87
AT1G05630.1	Thale cress	cytosol	46.1	49.57
CDY34516	Canola	cytosol	44.12	49.12
Bra005638.1-P	Field mustard	cytosol	44.52	48.87
KRH01854	Soybean	cytosol	24.01	48.79
CDY42072	Canola	cytosol	44.28	48.65
Solyc12g096660.1.1	Tomato	cytosol	45.31	47.82
AT2G31830.2	Thale cress	cytosol	44.28	47.49
HORVU0Hr1G008620.1	Barley	mitochondrion	41.02	46.65
Bra000333.1-P	Field mustard	nucleus	45.63	44.39
CDX95575	Canola	nucleus	45.39	44.06
AT2G43900.2	Thale cress	nucleus	46.82	43.69
HORVU0Hr1G007680.12	Barley	cytosol	8.19	30.75

Protein Annotations

MapMan:27.5.4.2	Gene3D:3.60.10.10	UniProt:A0A287RU38	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0046856	EnsemblPlantsGene:HORVU5Hr1G075330	EnsemblPlants:HORVU5Hr1G075330.2	InterPro:IPPc
InterPro:IPR001680	InterPro:IPR036691	PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF145	SMART:SM00128
SMART:SM00320	SUPFAM:SSF101908	SUPFAM:SSF56219	UniParc:UPI000B466969	InterPro:WD40_repeat	SEG:seg

Description

No Description!

Coordinates

chrchr5H:+:546789390..546796187

Molecular Weight (calculated)

137233.0 Da

IEP (calculated)

7.740

GRAVY (calculated)

-0.390

Length

1258 amino acids

Sequence
(BLAST)

0001: AASDPRPLPP PRLPRRALLP RPAILTISIL SLPLPFPRPR PRPRPAPGPP TVTARRTHIR GDRPAGGGGR AITPMEPDDE ALKELAAASS RPPQRRGISY
0101: SQPLSRGDTA SARRAALRNH SLDDDHILPA SHSLSYSHHD PSAGVPAGYH PPLPPQQHHH HHPSASYSSG PSSRRSIGGA SDGSMTLERA MSEYGGGAGT
0201: LPEFVGAGGG KGIFRVPLRA AMHPLRPPPL EVRPHPLRET QAGSFLRTLA ADPKRRQLWA GAESGIRVWA LDEVFAGWGA GARRGDEESA PFREGVPAPP
0301: ALCVAMDRAN GLLWTGHKDG RIRSWRMDLE TAATAPAPPP PGSSGEGSVG GSGHGGSNSA PVFREALTWQ AYGRTPVLSM AITSYGEIWS GSEGGVIKAW
0401: PYDAIAKSLS LSPEERHMAA LLVERAYIDL RNHCTVGNVC SLPASDVKYM LADHSRAKVW TLTSMTFALW DARTRELLKV FGMDGQVESA RLDAPVMPEQ
0501: PMEEVEVKVK PSKKDKSGGS LNFFQKSRNA LMGAADAVRR VATKGTFVED TRRTGAVAQA DDGAIWSGCT NGCIIQWDGN GNRMQEFQHH TSSVQCIKAL
0601: GDRVWVGYAS GTVQVMDVEG NLLAGWTGHS CPVIRMAIGG SYIYTLAHHG GIRGWPLTSP GPLDDVLRTE LANKELSYTR MEKINIMVGS WNVAQGKATA
0701: ESLKAWLGSV SSDVGLVVVG LQEVEMGAGF LAISAAKETV GLEGSANGQW WIDNIGKALD EGTSFHRVGS RQLAALLIAA WVRKSLKPYV GDVEAAAVPC
0801: GLGRAIGNKG GVGLRIRVYD RKMCFVSNHF AAHLEAVARR NADFDHIYRT MAFNKPHGST SSATSVQLHR TVNVNGNQVD EVRPDLADAD MVVFLGDFNY
0901: RLYGITYDEA RDMVSQRSFD WLREKDQLRA EMKAGKVFQG MREGLIKFPP TYKFQKHAPG LGGYDSGEKK RIPAWCDRVL YRDSRAVSVA ECSLECPVVA
1001: AITSYVAVME VTESDHKPVR CTFSVDIARV DELTRRQEYG EIIESNEEVR SMLQESCFVP DSTVSTEEII LENQENIIFH ITNNCETGKA AFEILCEGQS
1101: TKKDDGTKSE ILPRASFGFP LWLEVQPANG LIKPGETVEI TIHHEDFYTQ EEFVDGIPQN WWCEDTRDKE AVLMVNITGS TSTETKTHMI NIRHRCPATS
1201: APPPIINPPV SFAPPSNTMP SEAPSKRSSK KRETSRQQQD YAQFGSSEVH DLYRMRCP

Best Arabidopsis Sequence Match ( AT2G43900.1 )
(BLAST)

0001: MDIINNNHRD ENDDDEEEAL SAMSSVPPPR KIHSYSHQLR ATGQKGHHRQ RQHSLDDIPK ITEIVSGCGI SGDSSDDEFY PYATTTNSSS FPFTGGDTGD
0101: SDDYLHQPEI GEDFQPLPEF VGSGGGVGMF KVPTRSPLHS ARPPCLELRP HPLKETQVGR FLRNIACTET QLWAGQESGV RFWNFDDAFE PGCGLSGRVQ
0201: RGDEDAAPFQ ESASTSPTTC LMVDNGNRLV WSGHKDGKIR SWKMDYVLDD GDDSPFKEGL AWQAHKGPVN SVIMSSYGDL WSCSEGGVIK IWTWESMEKS
0301: LSLRLEEKHM AALLVERSGI DLRAQVTVNG TCNISSSEVK CLLADNVRSK VWAAQLQTFS LWDGRTKELL KVFNSEGQTE NRVDMPLGQD QPAAEDEMKA
0401: KIASTSKKEK PHGFLQRSRN AIMGAADAVR RVATRGGGAY EDAKRTEAMV LAGDGMIWTG CTNGLLIQWD GNGNRLQDFR HHQCAVLCFC TFGERIYIGY
0501: VSGHIQIIDL EGNLIAGWVA HNNAVIKMAA ADGYIFSLAT HGGIRGWPVI SPGPLDGIIR SELAEKERTY AQTDSVRILT GSWNVGQGKA SHDALMSWLG
0601: SVASDVGILV VGLQEVEMGA GFLAMSAAKE SVGGNEGSTI GQYWIDTIGK TLDEKAVFER MGSRQLAGLL ISLWVRKNLR THVGDIDVAA VPCGFGRAIG
0701: NKGGVGLRIR VFDRIMCFIN CHLAAHLEAV NRRNADFDHI YKTMSFTRSS NAHNAPAAGV STGSHTTKSA NNANVNTEET KQDLAEADMV VFFGDFNYRL
0801: FGISYDEARD FVSQRSFDWL REKDQLRAEM KAGRVFQGMR EAIITFPPTY KFERHRPGLG GYDSGEKKRI PAWCDRVIFR DTRTSPESEC SLDCPVVASI
0901: MLYDACMDVT ESDHKPVRCK FHVKIEHVDR SVRRQEFGRI IKTNEKVRAL LNDLRYVPET IVSSNSIVLQ NQDTFVLRIT NKCVKENAVF RILCEGQSTV
1001: REDEDTLELH PLGSFGFPRW LEVMPAAGTI KPDSSVEVSV HHEEFHTLEE FVDGIPQNWW CEDTRDKEAI LVVNVQGGCS TETVCHRVHV RHCFSAKNLR
1101: IDSNPSNSKS QSLKKNEGDS NSKSSKKSDG DSNSKSSKKS DGDSNSKSSK KSDGDSNSKS SKKSDGDSNS KSSKKSDGDS NSKSSKKSDG DSNSKSSKKS
1201: DGDSCSKSQK KSDGDTNSKS QKKGDGDSSS KSHKKNDGDS SSKSHKKNDG DSSSKSHKKS DGDSSSKSHK KSEGDSSSKS HKKNDGDSSS SYKSQSGKKN
1301: SNSSTVEESR NNHNKR

Arabidopsis Description

Endonuclease/exonuclease/phosphatase family protein [Source:TAIR;Acc:AT2G43900]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.