Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42072 | Canola | cytosol | 81.16 | 83.14 |
| CDY34516 | Canola | cytosol | 80.05 | 83.1 |
| Bra005638.1-P | Field mustard | cytosol | 80.65 | 82.55 |
| AT1G05630.1 | Thale cress | cytosol | 70.42 | 70.6 |
| KRH51310 | Soybean | cytosol | 57.46 | 61.05 |
| KRH01854 | Soybean | cytosol | 31.54 | 59.77 |
| KRH01856 | Soybean | cytosol | 25.58 | 58.14 |
| VIT_05s0094g01330.t01 | Wine grape | cytosol | 51.07 | 57.82 |
| Solyc12g019080.1.1 | Tomato | nucleus | 50.81 | 56.07 |
| Solyc08g014580.2.1 | Tomato | nucleus | 54.82 | 55.53 |
| PGSC0003DMT400064953 | Potato | cytosol | 54.56 | 54.98 |
| PGSC0003DMT400052499 | Potato | nucleus | 53.62 | 54.6 |
| GSMUA_AchrUn_... | Banana | mitochondrion | 47.4 | 54.46 |
| GSMUA_Achr5P25380_001 | Banana | cytosol, nucleus, peroxisome | 30.43 | 53.85 |
| AT1G65580.1 | Thale cress | nucleus | 48.59 | 51.77 |
| Zm00001d028271_P001 | Maize | cytosol | 12.45 | 51.59 |
| Os09t0500300-01 | Rice | cytosol | 43.31 | 50.75 |
| AT2G43900.2 | Thale cress | nucleus | 58.06 | 50.52 |
| Zm00001d002647_P001 | Maize | cytosol, endoplasmic reticulum, plastid | 17.65 | 50.0 |
| Solyc12g096660.1.1 | Tomato | cytosol | 50.38 | 49.58 |
| Os08t0524100-01 | Rice | nucleus | 45.95 | 48.69 |
| EES15333 | Sorghum | cytosol | 47.31 | 48.47 |
| GSMUA_Achr11P... | Banana | cytosol | 47.57 | 48.44 |
| GSMUA_Achr5P25370_001 | Banana | extracellular, vacuole | 18.93 | 48.16 |
| KXG35959 | Sorghum | cytosol | 48.25 | 47.64 |
| Zm00001d021014_P001 | Maize | cytosol | 47.91 | 47.63 |
| Zm00001d006063_P002 | Maize | cytosol | 48.08 | 47.55 |
| TraesCS7D01G253900.2 | Wheat | nucleus | 46.8 | 47.41 |
| TraesCS7B01G151900.2 | Wheat | nucleus | 46.63 | 47.36 |
| TraesCS7A01G255500.2 | Wheat | cytosol | 46.72 | 47.24 |
| HORVU7Hr1G052740.2 | Barley | cytosol | 46.63 | 47.24 |
| Zm00001d031554_P003 | Maize | nucleus | 44.76 | 47.0 |
| TraesCS5A01G278100.1 | Wheat | nucleus | 47.4 | 46.96 |
| TraesCS5B01G277500.1 | Wheat | nucleus | 47.4 | 46.88 |
| Zm00001d049785_P003 | Maize | cytosol | 45.27 | 46.83 |
| TraesCS5D01G285100.2 | Wheat | nucleus | 47.49 | 45.69 |
| HORVU5Hr1G075330.2 | Barley | mitochondrion, plastid | 47.49 | 44.28 |
| AT1G47510.1 | Thale cress | nucleus, plastid | 8.44 | 29.64 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:27.5.4.2 | Gene3D:3.60.10.10 | EntrezGene:817740 | ProteinID:AEC08591.1 | ArrayExpress:AT2G31830 |
| EnsemblPlantsGene:AT2G31830 | RefSeq:AT2G31830 | TAIR:AT2G31830 | RefSeq:AT2G31830-TAIR-G | EnsemblPlants:AT2G31830.2 | TAIR:AT2G31830.2 |
| Unigene:At.51207 | InterPro:Endo/exonu/phosph_ase_sf | InterPro:Endo/exonuclease/phosphatase | UniProt:F4IRT2 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004439 | GO:GO:0004518 | GO:GO:0004519 | GO:GO:0004527 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005975 | GO:GO:0006139 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0034485 | GO:GO:0046855 | GO:GO:0046856 | GO:GO:0052658 |
| GO:GO:0090305 | InterPro:IPPc | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR036691 | RefSeq:NP_001189651.1 |
| PFAM:PF03372 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR11200 |
| PANTHER:PTHR11200:SF137 | SMART:SM00128 | SMART:SM00320 | SUPFAM:SSF101908 | SUPFAM:SSF56219 | UniParc:UPI0001E92D65 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | SEG:seg | : | : | : |
Description
Endonuclease/exonuclease/phosphatase family protein [Source:UniProtKB/TrEMBL;Acc:F4IRT2]
Coordinates
chr2:-:13532680..13537741
Molecular Weight (calculated)
129179.0 Da
IEP (calculated)
7.416
GRAVY (calculated)
-0.371
Length
1173 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSVIIEPDE REALASLVPA HPLPPRKTHS YVEQCEQKPH HPIRKYSLDE GSRSVTSDSE AVYFDSSDGE FSTEGVAIVD GRTSGERGNG EECGFVTPPS
0101: KPASQGGGND GGREDDIESL PEFIGAGGGL DVFKVPVRAA VNPGRPPCLE LRPHPLRETQ TGKFLRNIAC TESQLWAGQE NGVRFWNLEE AYEVGCGLGG
0201: QVRRGDEDTA PFHESVPTSP ALCLLVDHGN RLVWTGHKDG KIRAWKMNQP NTTTADDSKP FKERLSWQAH RGPVNYIVIS SYGDMWSCSD GGVIKIWTLD
0301: SLEKSLVLKL EEKHMAALLV ERSGIDLRSQ VTVNGTCSIS SSDVKFLLVD TVKAKVWAVQ HLSFSLWDAQ NKELLKVFNI DGQVENRVDM PPTQGQQVED
0401: TKAKFFSAPK KEKSQGFLQR SRHAIMGAAG AVRRAATRSA GAFAEDTRKV EAIAIAADGS IWTGSMNGVI AQWDGNGSRL REVNHHQQAV LCFCTFGDRI
0501: YVGYSSGYIQ VLDLGGKLIA SWVSHNEPVI KLAAGGGFIF SLATHGGVRG WYVTSPGPLD SLIRTELSQK EMAYARQDSV KILIGTWNVG EGRASRGALV
0601: SWLGSAVSDV GIVAIGLQEV DMGAGFLAMS TAKETVGVEG SAVGQWWLDA IGNALDERNT FERMGSRQLA GLLISLWVRK SIRTHVGDLD VAAVPCGFGR
0701: AIGNKGGVGL RIRVYDRIMC FVNCHLAAHL EAVTRRNADF NHIYRSMVFS KGQSVYTAAA AGASTSAQAL KNNPNTNNST EEEKSHLASA DLVAFFGDFN
0801: YRLFGITYDE ARDFISHRSF DWLREKDQLR QEMNEGKVFQ GMREALITFP PTYKFEKNKP GLGGYDSGEK KRIPAWCDRV IYRDNQSISY TECSLKCPVV
0901: SSTIMYEACM DVTESDHKPV RCKLHANIAH TDKSVRRQEL GKIVKSNEKL RAMFEELKSV PETSVSTNNI LLHSQDTFIF TIRNTSNSSR AIFNIVCKGQ
1001: TLVREDGEEP DNHSRGTFGL PRWLEVSPGA GIIKPDASLQ VKVHHEDSHN SEEFIDGIQQ NSLSEESSDK EVTLIIIVQG SCSTRTISHS IKVRHCSSAA
1101: KSLSLVHSKT TTMTKNLEGS TRYQTDANRD RRSSRTVKPS KEMHPVIVSS FSFLNSSDIR KGQIALRLFF RVQ
0101: KPASQGGGND GGREDDIESL PEFIGAGGGL DVFKVPVRAA VNPGRPPCLE LRPHPLRETQ TGKFLRNIAC TESQLWAGQE NGVRFWNLEE AYEVGCGLGG
0201: QVRRGDEDTA PFHESVPTSP ALCLLVDHGN RLVWTGHKDG KIRAWKMNQP NTTTADDSKP FKERLSWQAH RGPVNYIVIS SYGDMWSCSD GGVIKIWTLD
0301: SLEKSLVLKL EEKHMAALLV ERSGIDLRSQ VTVNGTCSIS SSDVKFLLVD TVKAKVWAVQ HLSFSLWDAQ NKELLKVFNI DGQVENRVDM PPTQGQQVED
0401: TKAKFFSAPK KEKSQGFLQR SRHAIMGAAG AVRRAATRSA GAFAEDTRKV EAIAIAADGS IWTGSMNGVI AQWDGNGSRL REVNHHQQAV LCFCTFGDRI
0501: YVGYSSGYIQ VLDLGGKLIA SWVSHNEPVI KLAAGGGFIF SLATHGGVRG WYVTSPGPLD SLIRTELSQK EMAYARQDSV KILIGTWNVG EGRASRGALV
0601: SWLGSAVSDV GIVAIGLQEV DMGAGFLAMS TAKETVGVEG SAVGQWWLDA IGNALDERNT FERMGSRQLA GLLISLWVRK SIRTHVGDLD VAAVPCGFGR
0701: AIGNKGGVGL RIRVYDRIMC FVNCHLAAHL EAVTRRNADF NHIYRSMVFS KGQSVYTAAA AGASTSAQAL KNNPNTNNST EEEKSHLASA DLVAFFGDFN
0801: YRLFGITYDE ARDFISHRSF DWLREKDQLR QEMNEGKVFQ GMREALITFP PTYKFEKNKP GLGGYDSGEK KRIPAWCDRV IYRDNQSISY TECSLKCPVV
0901: SSTIMYEACM DVTESDHKPV RCKLHANIAH TDKSVRRQEL GKIVKSNEKL RAMFEELKSV PETSVSTNNI LLHSQDTFIF TIRNTSNSSR AIFNIVCKGQ
1001: TLVREDGEEP DNHSRGTFGL PRWLEVSPGA GIIKPDASLQ VKVHHEDSHN SEEFIDGIQQ NSLSEESSDK EVTLIIIVQG SCSTRTISHS IKVRHCSSAA
1101: KSLSLVHSKT TTMTKNLEGS TRYQTDANRD RRSSRTVKPS KEMHPVIVSS FSFLNSSDIR KGQIALRLFF RVQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.