Factsheet for TraesCS4A01G244500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G069300.2	Wheat	cytosol	89.61	89.61
HORVU0Hr1G007680.12	Barley	cytosol	88.72	89.25
TraesCS4B01G070500.1	Wheat	cytosol	88.13	87.35
Os03t0626500-00	Rice	cytosol	78.64	83.86
EER93785	Sorghum	cytosol	78.34	78.11
Zm00001d033300_P001	Maize	cytosol	74.48	72.33
GSMUA_Achr3P15110_001	Banana	cytosol	57.86	59.09
PGSC0003DMT400043508	Potato	cytosol	53.41	56.07
VIT_18s0001g11790.t01	Wine grape	cytosol	52.52	55.66
Solyc04g079820.2.1	Tomato	cytosol	53.41	53.25
CDY17072	Canola	cytosol	50.45	51.67
CDY06733	Canola	cytosol	49.85	51.06
Bra015615.1-P	Field mustard	cytosol	49.85	51.06
AT1G47510.1	Thale cress	nucleus, plastid	49.85	50.3
KRH15266	Soybean	extracellular, golgi, mitochondrion	51.63	45.08
KRH05773	Soybean	mitochondrion	40.36	41.85
TraesCS4A01G082700.1	Wheat	cytosol	28.78	9.01
TraesCS7A01G255500.2	Wheat	cytosol	30.86	8.97
TraesCS5A01G278100.1	Wheat	nucleus	30.86	8.78

Protein Annotations

MapMan:27.5.4.3	Gene3D:3.60.10.10	ncoils:Coil	InterPro:Endo/exonu/phosph_ase_sf	InterPro:Endo/exonuclease/phosphatase	GO:GO:0003674
GO:GO:0003824	GO:GO:0004439	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006629
GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009628	GO:GO:0009651
GO:GO:0009719	GO:GO:0009733	GO:GO:0009737	GO:GO:0009753	GO:GO:0009987	GO:GO:0016020
GO:GO:0016787	GO:GO:0034485	GO:GO:0043813	GO:GO:0046856	InterPro:IPPc	InterPro:IPR036691
PFAM:PF03372	PANTHER:PTHR11200	PANTHER:PTHR11200:SF247	SMART:SM00128	SUPFAM:SSF56219	EnsemblPlantsGene:TraesCS4A01G244500
EnsemblPlants:TraesCS4A01G244500.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:554924159..554925889

Molecular Weight (calculated)

37541.2 Da

IEP (calculated)

8.130

GRAVY (calculated)

-0.223

Length

337 amino acids

Sequence
(BLAST)

001: MGNCSSFSLP KWIFGDLHNN GMVSIEGDGT HEGIKTIRIQ KACEFTASSV LCVCIITWNM NGKMSVEDIR KLVSSTRKFD LLVVGLQEVP KCGVEQVLQE
101: AMADTHILLC QKAMQSIQMF LFGAKSSEAY IKEMKVDEHA VGGCGGVIGR KKGAVAMYVN FSGIRMVFVS CHLAAHERKV EKRNSECRHI SHSLFSKNDI
201: HYAKSADITV WLGDLNYRLE GISSMPARKM IEENRQSKLR DRDQLLQEAE KGQVFHGYCE GTLSFKPTYK YNVGSSNYDS SYKIRVPSWT DRILFKVDHS
301: SGLDAVLSSY EALDCVSSSD HKPVKAHLCL KVCGGDS

Best Arabidopsis Sequence Match ( AT1G47510.1 )
(BLAST)

001: MPTMGNKNSM CGLKRFPNYK KSPIGSFAKN SSSHDGIKTI EAVNSCSFSR KADLCIRIIT WNMNGNVSYE DLVELVGKER KFDLLVVGLQ EAPKANVDQL
101: LQTASSPTHE LLGKAKLQSV QLYLFGPKNS HTLVKELKAE RYSVGGCGGL IGRKKGAVAI RINYDDIKMV FISCHLSAHA KKVDQRNTEL RHIANSLLPR
201: DKRKRDLTVW LGDLNYRIQD VSNHPVRSLI QNHLQSVLVS KDQLLQEAER GEIFKGYSEG TLGFKPTYKY NVGSSDYDTS HKIRVPAWTD RILFKIQDTD
301: NIQATLHSYD SIDQVYGSDH KPVKADLCLK WVNS

Arabidopsis Description

IP5P11Type IV inositol polyphosphate 5-phosphatase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q5EAF2]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.