CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 2
plastid 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra017078.1-P	Field mustard	cytosol	98.74	70.32
CDX93267	Canola	plastid	93.69	61.83
AT2G39380.1	Thale cress	plastid	80.05	49.76
CDX74848	Canola	plastid	73.48	47.7
CDX74849	Canola	plastid	75.51	47.54
CDY44645	Canola	plastid	75.0	46.12
CDY64629	Canola	plastid	74.75	46.03
CDY64627	Canola	plastid	72.73	44.58
CDX74850	Canola	plastid	74.49	43.77
CDY02916	Canola	plastid	68.69	42.97
CDX76117	Canola	plastid	68.69	42.97
CDX73400	Canola	plastid	67.17	42.42
CDY40204	Canola	plastid	66.67	42.31
CDY44646	Canola	cytosol	69.19	39.26
CDY60968	Canola	cytosol	9.34	35.24
CDX93621	Canola	cytosol	38.64	34.08
VIT_00s0317g00140.t01	Wine grape	plastid	52.53	33.44
CDY28574	Canola	cytosol	20.71	30.37
PGSC0003DMT400060448	Potato	plastid	47.73	29.17
Solyc05g054820.1.1	Tomato	plastid	47.47	29.15
CDY02484	Canola	cytosol	22.22	29.14
CDY49576	Canola	cytosol	39.65	28.49
CDY02822	Canola	cytosol	20.71	28.47
CDX88720	Canola	plastid	39.14	28.18
CDY68540	Canola	plastid	38.89	28.1
CDX97230	Canola	cytosol	13.38	28.04
CDX69666	Canola	cytosol	13.38	28.04
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	39.14	27.93
CDY60562	Canola	cytosol	38.89	27.85
CDY41604	Canola	cytosol	43.43	27.79
CDY44712	Canola	cytosol	42.93	27.69
CDY41297	Canola	mitochondrion	41.67	27.14
CDY04577	Canola	plastid	36.36	26.52
CDX80235	Canola	cytosol, nucleus, plastid	41.16	26.04
CDX95128	Canola	cytosol, nucleus, plastid	38.13	25.99
GSMUA_Achr10P...	Banana	cytosol	29.55	25.94
GSMUA_AchrUn_...	Banana	cytosol	36.87	25.52
CDX77195	Canola	mitochondrion, plastid	37.63	25.51
CDY31722	Canola	mitochondrion, plastid	37.37	25.43
GSMUA_Achr10P...	Banana	mitochondrion	38.89	25.04
CDY07931	Canola	cytosol	39.14	24.76
GSMUA_Achr6P34400_001	Banana	mitochondrion	37.63	24.67
CDX73983	Canola	mitochondrion	38.38	24.52
CDY10372	Canola	cytosol	17.42	23.0
GSMUA_Achr7P15340_001	Banana	mitochondrion	34.09	22.13
CDY60967	Canola	plastid	19.95	20.63
CDX68265	Canola	cytosol	31.31	20.36
CDY50639	Canola	cytosol	31.06	20.2
CDY02176	Canola	cytosol	25.0	18.0
CDY61474	Canola	cytosol	22.98	17.91
CDY44387	Canola	cytosol	25.76	17.83
CDY04082	Canola	cytosol	25.76	17.8
CDX97543	Canola	cytoskeleton, cytosol, nucleus	27.78	17.8
CDY06667	Canola	cytosol	26.01	17.25
CDY10240	Canola	cytosol	26.01	17.25
CDY52262	Canola	cytoskeleton, cytosol, nucleus	28.03	17.18
CDX71629	Canola	cytosol	28.79	17.07
CDY05812	Canola	cytosol, plastid	28.79	17.01
CDY60022	Canola	cytosol	26.52	16.99
CDX91635	Canola	cytosol	27.02	16.93
CDY27076	Canola	cytosol	27.02	16.93
CDY44373	Canola	cytosol	23.99	16.87
CDX70300	Canola	cytosol	26.52	16.61
CDY10374	Canola	cytosol	26.52	16.46
CDX86365	Canola	cytosol	26.26	16.07
CDX85273	Canola	cytosol	25.76	15.69
CDX78509	Canola	nucleus	24.49	15.47
CDY69943	Canola	cytosol	24.49	15.47
CDX69615	Canola	cytosol, nucleus, plastid	23.74	13.72
CDY09840	Canola	cytosol, nucleus, plastid	23.74	13.7
CDX70532	Canola	nucleus	23.48	13.64
CDX78551	Canola	nucleus	23.23	13.51
CDX85618	Canola	nucleus	23.74	13.47
CDY70944	Canola	cytosol	12.63	11.79
CDX91088	Canola	cytosol, nucleus, vacuole	22.47	11.53
CDY23090	Canola	nucleus	24.24	10.23
CDY02823	Canola	cytosol	0.51	0.8

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	GO:A0A078F5S1	EnsemblPlants:CDY07003	ProteinID:CDY07003	ProteinID:CDY07003.1
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00123316001
PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF26	SUPFAM:SSF74788	UniParc:UPI0004EE3CFD	SEG:seg

Description

BnaA04g23120D

Coordinates

chrLK031974:-:642393..643583

Molecular Weight (calculated)

45219.7 Da

IEP (calculated)

8.870

GRAVY (calculated)

-0.138

Length

396 amino acids

Sequence
(BLAST)

001: MIKNWIKAAK IGVTTLFKGE KLLCDHVFSS STTIRDSCFY EIANESGLNL FSLPELVVNK EKKPPPERIF KLMDLYAAIS ELRPEIELIF NFDSVASVKT
101: LAISSLKKLK NSIHTCLTEF ELKIQKDSSK ALTPGGGIHR LTRTTMSFIS SLSGYSRVLS EILAEHAIKR NTRFLESYFT APILEDEHIN HHATSVHIAW
201: LILVLLCKLD IKAESYKDVS LSYLFLVNNI RLVVDTVRST HHLRNLLGDD WLTKHEAKLR SYTTNYENAA WAKVYQTVPV RTSTTLSPDQ AKTHFKRFHV
301: AFEEAYMKQS SCVILDAKLR DEFKVSIARK LVPEYKEFYQ KYLPMLREEI NIEMLVRFKP DNLENYLSHL FHGTPMLSDS SSSASSSSMC ISLGYG

Best Arabidopsis Sequence Match ( AT1G07725.1 )
(BLAST)

001: MVLLKPTTLS KSSKVGPQQQ QGFSESLIGD SVEAADAFIC QWVTPHLCDS SSSSCSLSSL FSAQNRLEGR RFLEVLGKLQ YAIQSTVAMN PDSAKLAKGQ
101: DLMRKAMKHL EKEFYRVLKS NRRFLSPESV SGWSSESNIP SRSSGTASDS SSDGELYSES SSELGKDIGG GGNSDAIVDL KMIANCMISS GYEKDCVKIY
201: KKFRKKIIVD TLSHLGFEKL TSTQMQKLEW EILEKKIKIW VIVARVAITT LFNGERILSD HIFSSSVAES CFVDITLQSA LNLFIFSLTV AKSRKTAEKI
301: FPTLDVYQTI LQLTPKIDQI FSYDSTAAVR LQANESLEKL SESVNAMMTE FQSSITKESS KSAISGGGVH QLTRYVMNFI VFLADYSDSL ATILKESSLP
401: LPEDYFSSSG EENPGSGDRS PMAARLAWLI LVLLCKIDAK SRLYNDSALS YLFLANNLHY VVTKVRTSNL RLVLGDDWVA NHEVKVNQYL EKYEKMAWGD
501: VIASLPGDST AGTEAEESLR RFNEAFEEAY KKHKTWVVPD PNLRDEIQAS IARKLMPGYT GFYKKHPVGS CNIVRFTPED LNNYITDLYV GLGRSVPVSK
601: TKKYMVSPSH TTDLK

Arabidopsis Description

ATEXO70H6Exocyst subunit exo70 family protein H6 [Source:UniProtKB/TrEMBL;Acc:Q9LQP9]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.