Factsheet for GSMUA_Achr6P34400_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 7
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr2P13200_001
GSMUA_Achr2P18260_001
GSMUA_Achr3P09860_001
GSMUA_Achr3P16300_001
GSMUA_Achr3P26230_001
GSMUA_Achr4P03120_001
GSMUA_Achr4P23470_001
GSMUA_Achr4P28270_001
GSMUA_Achr4P32230_001
GSMUA_Achr5P01960_001
GSMUA_Achr5P09310_001
GSMUA_Achr6P04640_001
GSMUA_Achr6P08260_001
GSMUA_Achr6P16290_001
GSMUA_Achr7P00520_001
GSMUA_Achr7P08050_001
GSMUA_Achr7P13680_001
GSMUA_Achr7P27540_001
GSMUA_Achr8P02810_001
GSMUA_Achr8P21300_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55150.1	GSMUA_Achr3P16300_001	AT1G51950.1	21798944
AT3G55150.1	GSMUA_Achr5P09310_001	AT1G51950.1	21798944
AT3G55150.1	GSMUA_Achr7P13680_001	AT1G51950.1	21798944
AT3G55150.1	GSMUA_AchrUn_...	AT1G51950.1	21798944
AT3G55150.1	GSMUA_Achr3P09860_001	AT3G56270.1	21798944
AT3G55150.1	GSMUA_Achr8P02810_001	AT3G56270.1	21798944
AT3G55150.1	GSMUA_Achr8P21300_001	AT3G56270.1	21798944
AT3G55150.1	GSMUA_Achr10P...	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr2P13200_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr3P26230_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr4P03120_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr4P28270_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr4P32230_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr5P01960_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr6P04640_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr7P08050_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr7P27540_001	AT4G08150.1	21798944
AT3G55150.1	GSMUA_Achr6P08260_001	AT5G22310.1	21798944
AT3G55150.1	GSMUA_Achr6P16290_001	AT5G22310.1	21798944
AT3G55150.1	GSMUA_Achr2P18260_001	AT5G51110.1	21798944
AT3G55150.1	GSMUA_Achr4P23470_001	AT5G61010.1	21798944
AT3G55150.1	GSMUA_Achr7P00520_001	AT5G61010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	50.83	68.07
GSMUA_AchrUn_...	Banana	cytosol	47.85	50.52
GSMUA_Achr7P15340_001	Banana	mitochondrion	48.51	48.03
GSMUA_Achr10P...	Banana	mitochondrion	48.84	47.97
VIT_06s0004g04010.t01	Wine grape	plastid	44.21	43.34
KRH25009	Soybean	mitochondrion	43.21	42.51
KRH29876	Soybean	mitochondrion	42.72	42.36
VIT_08s0040g02730.t01	Wine grape	plastid	44.04	41.89
CDX88720	Canola	plastid	37.42	41.09
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	37.42	40.72
KRH10327	Soybean	plastid	39.57	40.3
KRH22987	Soybean	cytosol, mitochondrion, plastid	38.08	40.14
KRH22988	Soybean	plastid	31.95	40.12
Solyc11g073010.1.1	Tomato	plastid	41.89	39.91
CDY60562	Canola	cytosol	36.42	39.78
CDY49576	Canola	cytosol	36.26	39.75
CDY68540	Canola	plastid	35.93	39.6
VIT_00s0317g00140.t01	Wine grape	plastid	40.4	39.23
PGSC0003DMT400028204	Potato	plastid	38.58	39.03
Bra006696.1-P	Field mustard	cytosol	39.9	38.87
KRG95862	Soybean	plastid	39.74	38.84
CDX93621	Canola	cytosol	28.81	38.75
PGSC0003DMT400040200	Potato	plastid	38.41	38.47
Bra034072.1-P	Field mustard	mitochondrion	38.58	38.32
CDY41297	Canola	mitochondrion	38.58	38.32
KRH67580	Soybean	plastid	39.9	37.95
PGSC0003DMT400061435	Potato	plastid	40.4	37.95
CDX80235	Canola	cytosol, nucleus, plastid	39.24	37.86
Solyc06g005280.1.1	Tomato	plastid	37.42	37.79
Bra002537.1-P	Field mustard	cytosol, nucleus, plastid	39.24	37.74
CDY07003	Canola	cytosol, golgi, mitochondrion, plastid	24.67	37.63
PGSC0003DMT400061436	Potato	plastid	39.9	37.48
PGSC0003DMT400061494	Potato	plastid	39.4	37.48
Solyc09g005830.1.1	Tomato	plastid	39.57	37.46
Solyc09g005840.1.1	Tomato	plastid	39.4	37.42
Bra020294.1-P	Field mustard	cytosol, plastid	38.41	37.36
KRH32349	Soybean	plastid	38.24	37.14
Bra029772.1-P	Field mustard	cytosol	37.58	36.97
CDY44712	Canola	cytosol	37.58	36.97
AT3G55150.1	Thale cress	plastid	38.91	36.95
Bra014771.1-P	Field mustard	plastid	38.58	36.87
PGSC0003DMT400078145	Potato	mitochondrion	38.08	36.86
Solyc06g075610.1.1	Tomato	plastid	37.91	36.76
CDY41604	Canola	cytosol	37.58	36.67
CDX76117	Canola	plastid	38.41	36.65
AT5G59730.1	Thale cress	cytosol, plastid	38.41	36.59
Bra017078.1-P	Field mustard	cytosol	33.61	36.51
CDY02916	Canola	plastid	38.08	36.33
AT3G09520.1	Thale cress	cytosol	37.75	36.31
CDX95128	Canola	cytosol, nucleus, plastid	34.77	36.14
AT2G28650.1	Thale cress	plastid	34.27	36.13
AT2G39380.1	Thale cress	plastid	37.75	35.79
CDY04577	Canola	plastid	31.95	35.54
CDX73400	Canola	plastid	36.76	35.41
CDY07931	Canola	cytosol	36.59	35.3
KRH19755	Soybean	mitochondrion, plastid	30.79	35.29
Bra001305.1-P	Field mustard	mitochondrion	36.09	35.16
CDX73983	Canola	mitochondrion	36.09	35.16
CDY40204	Canola	plastid	36.26	35.1
Bra018685.1-P	Field mustard	cytosol, nucleus, plastid	33.44	34.95
Bra007146.1-P	Field mustard	plastid	36.26	34.82
CDX77195	Canola	mitochondrion, plastid	33.61	34.76
CDY31722	Canola	mitochondrion, plastid	33.44	34.71
CDX93267	Canola	plastid	34.11	34.33
AT1G07725.1	Thale cress	cytosol, nucleus, plastid	34.93	34.31
CDX74849	Canola	plastid	35.6	34.18
CDY44645	Canola	plastid	36.26	34.01
Bra035682.1-P	Field mustard	mitochondrion, plastid	33.77	34.0
CDY64629	Canola	plastid	35.93	33.75
CDY60967	Canola	plastid	21.36	33.68
Solyc05g054820.1.1	Tomato	plastid	35.93	33.64
Bra005045.1-P	Field mustard	plastid	36.09	33.64
PGSC0003DMT400060448	Potato	plastid	35.93	33.49
CDY60968	Canola	cytosol	5.79	33.33
AT2G28640.1	Thale cress	mitochondrion	33.28	33.22
CDY64627	Canola	plastid	35.26	32.97
CDX74848	Canola	plastid	32.95	32.62
Bra005044.1-P	Field mustard	cytosol, nucleus, plastid	30.96	32.58
GSMUA_Achr9P14390_001	Banana	cytosol	30.46	32.51
CDX74850	Canola	plastid	35.93	32.2
AT3G09530.1	Thale cress	mitochondrion	33.77	32.03
Bra005046.1-P	Field mustard	plastid	35.43	31.85
GSMUA_Achr10P...	Banana	cytosol	29.14	30.03
GSMUA_Achr10P...	Banana	cytosol	29.14	29.0
CDY44646	Canola	cytosol	33.28	28.8
GSMUA_Achr10P...	Banana	cytosol	26.49	28.52
GSMUA_Achr11P...	Banana	endoplasmic reticulum, extracellular	26.49	27.26
GSMUA_Achr9P01500_001	Banana	cytosol	25.83	25.87
GSMUA_Achr4P23470_001	Banana	cytosol	25.33	25.63
GSMUA_Achr2P20450_001	Banana	plastid	27.98	25.3
GSMUA_Achr10P...	Banana	cytosol	26.32	24.73
GSMUA_Achr5P26180_001	Banana	cytosol	26.66	24.69
GSMUA_Achr6P20710_001	Banana	cytosol, plastid	26.49	24.46
GSMUA_Achr7P00520_001	Banana	cytosol	24.34	24.26
GSMUA_Achr6P07200_001	Banana	nucleus	23.84	21.79
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	25.0	21.54
GSMUA_Achr6P18090_001	Banana	nucleus	15.23	19.96
GSMUA_Achr10P...	Banana	cytosol	15.89	12.34

Protein Annotations

EnsemblPlants:GSMUA_Achr6P34400_001	EnsemblPlants:GSMUA_Achr6T34400_001	EnsemblPlantsGene:GSMUA_Achr6G34400_001	Gene3D:1.20.1280.170	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF17	PFAM:PF03081
SEG:seg	SUPFAM:SSF74788	UniParc:UPI0002960C74	UniProt:M0TCN3	MapMan:22.6.3.1	:

Description

Protein binding protein, putative [Source:GMGC_GENE;Acc:GSMUA_Achr6G34400_001]

Coordinates

chr6:+:33027442..33029439

Molecular Weight (calculated)

65347.7 Da

IEP (calculated)

6.865

GRAVY (calculated)

0.001

Length

604 amino acids

Sequence
(BLAST)

001: MPRKGMRSLF TSSSAPKVGP ALHLRGPRYG AAGGPLSPSC FTFSDRSMEE NIAAAAEVIR EWGPEVDDSL FGSGRADSGR FLQAVSDLHR SMLFFSSPSA
101: LLLSAHGQLL NPLDSLRSAS FSDSSDVECA ADSITEVESA ADVAIRDLRA VAETMISAGY GKECVRVYKT MRKSAVDESI HRLGCELLTQ AQVRKLDWAE
201: FESKIRDWLA AAPIAFRTIF SGERLLCDRV FASSDAIRES CFADVARDAA ASLLAFPETV ARSKRSPEKL FRILDLYDAV SELWPEIESM FSFEATTAVR
301: LQALASLLRL AEVARSTMAN FEAAIQKDAS RSRVPGGGVH SLTRYVMDYL VFLADYELPL TDIFADFPFR AQSPLPDSPW SSSPSPASSA VGSISVRIAW
401: LVLVLICKLD GKAELYREVA LSYLFLANNL QYIVQKVKES GLRLLLGDEW VARHGAKARH YAASYERLAW AKVAAAIPED GTVTTAVEAW ERMRGFNTAL
501: EAACRGQAGW VVVADGGLRE EVMSAVAALV VPAYRAFYKR SRPVLRVSGA ASAAVVRFSP EDVRNRIYGL FGGSMGSGSS GDSGTGSSRG STGFGAPVGS
601: NRLE

Best Arabidopsis Sequence Match ( AT3G55150.1 )
(BLAST)

001: MAKMAKFSFF SSSSPKYHPS SPSSFTSFPA SPLNQNFTQA MMEETVETAD SVIRKWDPNT PSFTKIVSLF NHSRKEAKEF IRCVRDLRRA MHFLVSQDSQ
101: SPKLALAQTL MQIAMARLEK EFFQILSSNR DKLDPESVSG QSSISSNSEF EDVMGSDDDD ESDNEMRKAG ESITQVEKAS AMVMSDLKAI AESMISCGYG
201: KECVKIYKRV RKSIVDEGLS LLGIEIYKGS RFHRTDWVTL EHMIKNWIKA AKIGIATLFR GEKLLCDHVF SASNSTRESC FYEIANEAAT NLFKFPEFVA
301: KEKKSHERIF PLMDLQAAIS DLWQDIEMIF HFDAVAGVKS QALTSLQKLK VSIHSALTDF ESIIQKDTTK ALTPGGGIHK LTRSTMNFIS SLSKYSGVLS
401: EILADHPLPR NTRLLESYVR APISEDEQHN HALSVHFAWL ILVLLCKLDT KAEHYKDVSL SYLFLANNLQ IIIETVGSTP LRNLLGDDWL NKHEDKLCAY
501: AGNYEIAAWS NVFMSLPEEP TDLSPEEAKI YFRRFHTAFE EAYMKQSSRV VPNAKLRDEL KVSIAKKLVP EYREFYRKYL PMLGQERNIE ILVRFKPDNL
601: ENYISDLFHG TPIHASSSFS SSSSSSSWKS LGCVSG

Arabidopsis Description

ATEXO70H1Exocyst complex component EXO70H1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VY27]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.