Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 97.09 | 96.22 |
| Bra006696.1-P | Field mustard | cytosol | 98.55 | 87.42 |
| CDY49576 | Canola | cytosol | 85.64 | 85.48 |
| CDY68540 | Canola | plastid | 83.09 | 83.39 |
| CDY60562 | Canola | cytosol | 83.82 | 83.36 |
| CDX80235 | Canola | cytosol, nucleus, plastid | 84.36 | 74.12 |
| AT5G59730.1 | Thale cress | cytosol, plastid | 82.55 | 71.61 |
| CDY60968 | Canola | cytosol | 9.64 | 50.48 |
| VIT_06s0004g04010.t01 | Wine grape | plastid | 52.36 | 46.75 |
| CDY04577 | Canola | plastid | 45.64 | 46.22 |
| Solyc06g005280.1.1 | Tomato | plastid | 49.45 | 45.48 |
| CDX93621 | Canola | cytosol | 36.91 | 45.21 |
| PGSC0003DMT400028204 | Potato | plastid | 48.55 | 44.72 |
| KRH29876 | Soybean | mitochondrion | 49.45 | 44.66 |
| Solyc11g073010.1.1 | Tomato | plastid | 51.27 | 44.48 |
| KRH25009 | Soybean | mitochondrion | 49.45 | 44.3 |
| KRH10327 | Soybean | plastid | 47.27 | 43.84 |
| KRH22987 | Soybean | cytosol, mitochondrion, plastid | 45.64 | 43.8 |
| KRH22988 | Soybean | plastid | 37.64 | 43.04 |
| CDY60967 | Canola | plastid | 29.82 | 42.82 |
| PGSC0003DMT400040200 | Potato | plastid | 46.73 | 42.62 |
| CDY31722 | Canola | mitochondrion, plastid | 45.09 | 42.61 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 44.55 | 42.17 |
| Solyc06g075610.1.1 | Tomato | plastid | 47.45 | 41.89 |
| PGSC0003DMT400078145 | Potato | mitochondrion | 47.27 | 41.67 |
| CDX77195 | Canola | mitochondrion, plastid | 44.0 | 41.44 |
| GSMUA_Achr10P... | Banana | cytosol | 33.45 | 40.8 |
| GSMUA_AchrUn_... | Banana | cytosol | 42.36 | 40.73 |
| CDY44712 | Canola | cytosol | 43.82 | 39.25 |
| CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 28.18 | 39.14 |
| CDY41604 | Canola | cytosol | 44.0 | 39.1 |
| CDY41297 | Canola | mitochondrion | 42.55 | 38.49 |
| GSMUA_Achr6P34400_001 | Banana | mitochondrion | 41.09 | 37.42 |
| CDX74849 | Canola | plastid | 41.82 | 36.57 |
| CDY64629 | Canola | plastid | 42.18 | 36.08 |
| GSMUA_Achr10P... | Banana | mitochondrion | 40.18 | 35.94 |
| GSMUA_Achr7P15340_001 | Banana | mitochondrion | 39.82 | 35.9 |
| CDX73400 | Canola | plastid | 40.91 | 35.89 |
| CDX74848 | Canola | plastid | 39.64 | 35.74 |
| CDX76117 | Canola | plastid | 41.09 | 35.7 |
| CDY64627 | Canola | plastid | 41.82 | 35.6 |
| CDY40204 | Canola | plastid | 40.36 | 35.58 |
| CDY28574 | Canola | cytosol | 17.45 | 35.56 |
| CDX73983 | Canola | mitochondrion | 40.0 | 35.48 |
| CDY02484 | Canola | cytosol | 19.45 | 35.43 |
| CDY44645 | Canola | plastid | 41.45 | 35.4 |
| CDY02916 | Canola | plastid | 40.55 | 35.23 |
| CDY07931 | Canola | cytosol | 39.64 | 34.82 |
| CDX93267 | Canola | plastid | 37.45 | 34.33 |
| CDX74850 | Canola | plastid | 41.82 | 34.12 |
| CDY44646 | Canola | cytosol | 40.36 | 31.81 |
| CDY02822 | Canola | cytosol | 16.0 | 30.56 |
| CDY50639 | Canola | cytosol | 31.45 | 28.41 |
| CDX68265 | Canola | cytosol | 31.27 | 28.24 |
| CDY10372 | Canola | cytosol | 14.91 | 27.33 |
| CDX71629 | Canola | cytosol | 32.91 | 27.1 |
| CDY05812 | Canola | cytosol, plastid | 32.91 | 27.01 |
| CDX97230 | Canola | cytosol | 8.91 | 25.93 |
| CDX69666 | Canola | cytosol | 8.91 | 25.93 |
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 28.55 | 25.4 |
| CDY61474 | Canola | cytosol | 23.27 | 25.2 |
| CDY04082 | Canola | cytosol | 26.0 | 24.96 |
| CDY44387 | Canola | cytosol | 25.82 | 24.83 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 28.73 | 24.46 |
| CDY02176 | Canola | cytosol | 24.36 | 24.36 |
| CDY60022 | Canola | cytosol | 26.73 | 23.79 |
| CDX70300 | Canola | cytosol | 27.27 | 23.73 |
| CDX85273 | Canola | cytosol | 28.0 | 23.69 |
| CDY44373 | Canola | cytosol | 24.18 | 23.62 |
| CDX91635 | Canola | cytosol | 27.09 | 23.58 |
| CDY27076 | Canola | cytosol | 27.09 | 23.58 |
| CDY10374 | Canola | cytosol | 27.27 | 23.51 |
| CDX86365 | Canola | cytosol | 27.45 | 23.34 |
| CDY06667 | Canola | cytosol | 25.09 | 23.12 |
| CDY10240 | Canola | cytosol | 24.91 | 22.95 |
| CDX78509 | Canola | nucleus | 24.91 | 21.85 |
| CDY69943 | Canola | cytosol | 24.55 | 21.53 |
| CDX78551 | Canola | nucleus | 26.0 | 21.0 |
| CDX70532 | Canola | nucleus | 26.0 | 20.97 |
| CDX85618 | Canola | nucleus | 26.55 | 20.92 |
| CDY70944 | Canola | cytosol | 16.0 | 20.75 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 25.82 | 20.73 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 25.82 | 20.7 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 24.91 | 17.75 |
| CDY23090 | Canola | nucleus | 24.91 | 14.61 |
| CDY02823 | Canola | cytosol | 5.64 | 12.45 |
Protein Annotations
| Gene3D:1.20.1280.170 | MapMan:22.6.3.1 | GO:A0A078DHP9 | EnsemblPlants:CDX88720 | ProteinID:CDX88720 | ProteinID:CDX88720.1 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00148772001 |
| PFAM:PF03081 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF17 | SUPFAM:SSF74788 | UniParc:UPI0004EEB73B | SEG:seg |
Description
BnaA03g09290D
Coordinates
chrLK031856:-:662661..664532
Molecular Weight (calculated)
61503.4 Da
IEP (calculated)
7.032
GRAVY (calculated)
-0.205
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKHLFRSSP PQEKQPAHQT LAESAVQECI SKINTVISKW TSPSPSSDAH LFSTNSRREA EEFAEAVRHL HITMHRLAAV NPSSEKLVYA QNLMQSAMNL
101: LESEFHQHRF SGGDSDAMDD LKMIADCMIS TGYAKECVKV YKTVRRSIVD ETLHGLAVER FTLHQVQKMD WDTLESKIRT WLPAVKLAVR SLFFGERLLA
201: DHVFSSSLNI VESSFTDITQ EGALTLFTFP ENAAKIKKLS PEKMFRFLDM YESLASLFVE IESIFFFDSA AAVRAQVINS LAKLGDAARL MMTDFETAIQ
301: KETSRTPVVG GGVHPLTRYV MNYLSFLADY DESIAELYSS PVSVRIAWVI LLTLCKIDGK AQPYKDVALS YLFLANNLQY VVVKVRSSPG LKVLLGEDWV
401: VRHEGKVKQY AEKFEKLAWG KVLTSLPENP KEEIAPEEAR ELFGRFNDEF EAAYRKQISW VVPDPKLRDW IKISLSGKLV PVCSEFCEVN RFGLGGDGFN
501: VRYTPEDIGN YLSDLYFGSR GSGSVSTKGS GSGSGTGSST TVRSRGGRSH
101: LESEFHQHRF SGGDSDAMDD LKMIADCMIS TGYAKECVKV YKTVRRSIVD ETLHGLAVER FTLHQVQKMD WDTLESKIRT WLPAVKLAVR SLFFGERLLA
201: DHVFSSSLNI VESSFTDITQ EGALTLFTFP ENAAKIKKLS PEKMFRFLDM YESLASLFVE IESIFFFDSA AAVRAQVINS LAKLGDAARL MMTDFETAIQ
301: KETSRTPVVG GGVHPLTRYV MNYLSFLADY DESIAELYSS PVSVRIAWVI LLTLCKIDGK AQPYKDVALS YLFLANNLQY VVVKVRSSPG LKVLLGEDWV
401: VRHEGKVKQY AEKFEKLAWG KVLTSLPENP KEEIAPEEAR ELFGRFNDEF EAAYRKQISW VVPDPKLRDW IKISLSGKLV PVCSEFCEVN RFGLGGDGFN
501: VRYTPEDIGN YLSDLYFGSR GSGSVSTKGS GSGSGTGSST TVRSRGGRSH
001: MGKHLFRSSP PPEKPTAHLS LAESAVQECM SNINTVISKW TSPAASSSDD FLFSTNSRRE AEEFVTAVRH LQSTMHRLVS VNPSSEKLIY AQNLMQSAMK
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTV RVKLVADVVV IE
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTV RVKLVADVVV IE
Arabidopsis Description
ATEXO70H7AT5g59730/mth12_130 [Source:UniProtKB/TrEMBL;Acc:Q9FN91]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.