CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74848	Canola	plastid	88.54	93.77
CDX74849	Canola	plastid	84.52	86.8
CDY64629	Canola	plastid	86.22	86.63
CDY44645	Canola	plastid	84.98	85.25
CDX74850	Canola	plastid	85.45	81.9
AT2G39380.1	Thale cress	plastid	77.55	78.65
CDY07003	Canola	cytosol, golgi, mitochondrion, plastid	44.58	72.73
CDX93267	Canola	plastid	67.34	72.5
CDY44646	Canola	cytosol	78.02	72.21
CDY02916	Canola	plastid	67.8	69.19
CDX76117	Canola	plastid	67.8	69.19
CDY40204	Canola	plastid	65.79	68.11
CDX73400	Canola	plastid	66.1	68.1
VIT_00s0317g00140.t01	Wine grape	plastid	49.85	51.77
PGSC0003DMT400060448	Potato	plastid	45.67	45.52
Solyc05g054820.1.1	Tomato	plastid	44.89	44.96
CDY41604	Canola	cytosol	40.09	41.84
CDX88720	Canola	plastid	35.6	41.82
CDX93621	Canola	cytosol	28.95	41.65
CDY68540	Canola	plastid	34.98	41.24
CDY49576	Canola	cytosol	35.14	41.2
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	35.29	41.08
CDY60562	Canola	cytosol	35.14	41.05
CDY44712	Canola	cytosol	39.01	41.04
GSMUA_Achr10P...	Banana	mitochondrion	38.7	40.65
GSMUA_AchrUn_...	Banana	cytosol	35.91	40.56
CDY41297	Canola	mitochondrion	38.08	40.46
CDX80235	Canola	cytosol, nucleus, plastid	37.62	38.82
GSMUA_Achr7P15340_001	Banana	mitochondrion	36.53	38.69
CDY07931	Canola	cytosol	37.46	38.66
CDX73983	Canola	mitochondrion	37.0	38.55
CDY04577	Canola	plastid	32.35	38.49
CDX95128	Canola	cytosol, nucleus, plastid	34.52	38.38
CDY31722	Canola	mitochondrion, plastid	33.28	36.94
CDX77195	Canola	mitochondrion, plastid	33.28	36.82
CDY60967	Canola	plastid	21.83	36.81
GSMUA_Achr10P...	Banana	cytosol	25.39	36.36
GSMUA_Achr6P34400_001	Banana	mitochondrion	32.97	35.26
CDY60968	Canola	cytosol	5.73	35.24
CDY28574	Canola	cytosol	12.38	29.63
CDY02484	Canola	cytosol	13.78	29.47
CDY50639	Canola	cytosol	26.63	28.24
CDX68265	Canola	cytosol	26.47	28.08
CDX71629	Canola	cytosol	28.33	27.4
CDY05812	Canola	cytosol, plastid	28.33	27.31
CDY02822	Canola	cytosol	12.07	27.08
CDX97543	Canola	cytoskeleton, cytosol, nucleus	25.54	26.7
CDY52262	Canola	cytoskeleton, cytosol, nucleus	25.85	25.85
CDY61474	Canola	cytosol	20.28	25.79
CDY04082	Canola	cytosol	22.45	25.31
CDY44387	Canola	cytosol	22.29	25.17
CDX97230	Canola	cytosol	7.12	24.34
CDX69666	Canola	cytosol	7.12	24.34
CDY02176	Canola	cytosol	20.59	24.18
CDX86365	Canola	cytosol	23.53	23.49
CDX85273	Canola	cytosol	23.53	23.38
CDY10240	Canola	cytosol	21.52	23.28
CDY06667	Canola	cytosol	21.36	23.12
CDY10372	Canola	cytosol	10.68	23.0
CDX70300	Canola	cytosol	22.45	22.94
CDY10374	Canola	cytosol	22.6	22.88
CDY27076	Canola	cytosol	22.14	22.63
CDX91635	Canola	cytosol	22.14	22.63
CDY44373	Canola	cytosol	19.2	22.02
CDY60022	Canola	cytosol	21.05	22.01
CDX78509	Canola	nucleus	21.05	21.69
CDY69943	Canola	cytosol	20.74	21.37
CDX69615	Canola	cytosol, nucleus, plastid	22.6	21.31
CDY09840	Canola	cytosol, nucleus, plastid	22.45	21.14
CDX70532	Canola	nucleus	21.52	20.38
CDX78551	Canola	nucleus	21.36	20.26
CDX85618	Canola	nucleus	21.52	19.91
CDY70944	Canola	cytosol	12.85	19.58
CDX91088	Canola	cytosol, nucleus, vacuole	21.21	17.75
CDY23090	Canola	nucleus	21.83	15.03
CDY02823	Canola	cytosol	5.73	14.86

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	GO:A0A078JGQ2	UniProt:A0A078JGQ2	EnsemblPlants:CDY64627	ProteinID:CDY64627
ProteinID:CDY64627.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00042455001	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF26	SUPFAM:SSF74788	UniParc:UPI0004EE4287
SEG:seg	:	:	:	:	:

Description

BnaCnng44410DBnaCnng44410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JGQ2]

Coordinates

chrLK034505:+:1510..3450

Molecular Weight (calculated)

73367.2 Da

IEP (calculated)

7.702

GRAVY (calculated)

-0.220

Length

646 amino acids

Sequence
(BLAST)

001: MEKMSKTVSF SSVSSISNLS ALPSFNSIPS FNSLPASRLK QTFSQSMMEE ALEAAETIIK KWDPNSQSYT KIISMFRNSR KEAKEFIRCV RDLRRAMHFL
101: VSQDSKSDKL VLAQNLMQIG MSTLEKEFFQ ILSSNRDHLD PESASGHSTI SSNSEFEVVM ENDDDEYDEL KKAGESISQV ENASALVMSD LKVIAETMIR
201: CGYGKECIKS YKLIRKSIVD EGLHLLGIEK VKTSQFQKMD WGMLEHMIKN WIKSAKIGVT TLLRGEKLLC DHVFSASITI GQSCFNQIAK EAGLNLFMFP
301: ELVASKEKKP HHERIFKLMD LYAAISDLWP DIEMIFSFDS LASVKNLVLS TLKKLKDSIH TCLKEFEVTI HKDSYKELTP EGGVHKLTRT RMSFISSLSE
401: YSRVLSEILA ENPLKRNTRL LEYYFTAPIL EDEHVNNHAF SVYLASLILV FLCKLDTKAE SYKDMCLSYF FIVNNLQFVV VTVRSTRLKS LLGDDWLTKH
501: EAKVRSYAEK YEKAAWTNVF ASLPAKTSAK LSAEEATTCF KRFHASFAGA YMKQSSCVIE DAKLRDELKV SIARKLVPEY REFYEKYLPM LRQDRNIETL
601: VSFKPDNLEN YLSDLFHGTT IISDSSHSAS SSLSSSSCCS IGCVKN

Best Arabidopsis Sequence Match ( AT2G39380.1 )
(BLAST)

001: MSKKPKSVHF STSSPKSFLS SFPSFTSLPA SPLNQTFSQS MMEETVEAAE SIIKKWDPNS PSYTKIISLF SHSRREAKEF IRCIRDLRRA MHFLISQHSK
101: SAKLVLAQHL MQIAMARLEK EFFQILSSNR DQLDPESVSG HSSISSNSEF EDVMQSSDDE EEDELKKAGE TITKVEKAAA LVMSDLKVIA ETMISCGYGK
201: ECIKSYKLIR KSIVDEGLHL LGIEKCKISR FNRMDWDVLE HMIKNWIKAA KIGVITLLRG EKLLCDHVFS ASSTIRESCF YEIVNEAGIN LFKFPELVAE
301: KKPSPERIFR LMDLYAAISD LRPDIELIFH FDSVAAVKTL VLSSLKKLKD SIYTSLMEFE STIQKDSSKA LTAGGGIHKL TRSTMSFISS LSEYSRVLSE
401: ILAEHPLKKN TRMLESYFTA PILEDEHNNH AVSVHLAWLI LIFLCKLDIK AESYKDVSLS YLFLVNNIQF VVDTVRSTHL RNLLGDDWLT KHEAKLRSYA
501: ANYEIAAWAN VYISLPEKTS SRLSPEEAKT HFKRFHAVFE EAYMKQSSCV ITDAKLRNEL KVSIAKKIVP EYREFYGKYL PTLSKERNIE MLVSFKPDNL
601: ENYLSDLFHG TPILSGSSSS SSSLSSSSCI SLGCVRN

Arabidopsis Description

ATEXO70H2Exocyst subunit exo70 family protein H2 [Source:UniProtKB/TrEMBL;Acc:O80625]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.