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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 3
  • cytosol 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:mitochondrion
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX73983 Canola mitochondrion 93.61 94.52
AT3G09530.1 Thale cress mitochondrion 71.25 70.02
CDY41604 Canola cytosol 53.99 54.6
CDY44712 Canola cytosol 53.35 54.4
CDY41297 Canola mitochondrion 52.56 54.11
VIT_08s0040g02730.t01 Wine grape plastid 47.12 46.46
KRG95862 Soybean plastid 44.25 44.82
PGSC0003DMT400061435 Potato plastid 45.37 44.17
PGSC0003DMT400061494 Potato plastid 44.73 44.09
Solyc09g005830.1.1 Tomato plastid 44.89 44.04
PGSC0003DMT400061436 Potato plastid 45.21 44.01
Solyc09g005840.1.1 Tomato plastid 44.41 43.71
KRH67580 Soybean plastid 44.09 43.46
KRH32349 Soybean plastid 41.37 41.64
KRH19755 Soybean mitochondrion, plastid 34.66 41.18
CDX73400 Canola plastid 40.89 40.83
CDX76117 Canola plastid 40.73 40.28
CDY02916 Canola plastid 40.73 40.28
CDY40204 Canola plastid 39.94 40.06
GSMUA_Achr10P... Banana mitochondrion 39.3 40.0
GSMUA_AchrUn_... Banana cytosol 36.42 39.86
CDX88720 Canola plastid 34.82 39.64
CDY68540 Canola plastid 34.5 39.42
CDY07003 Canola cytosol, golgi, mitochondrion, plastid 24.76 39.14
CDX74849 Canola plastid 39.3 39.11
CDY60562 Canola cytosol 34.5 39.06
CDX93621 Canola cytosol 27.96 38.98
CDX71078 Canola cytosol, mitochondrion, nucleus, plastid 34.5 38.92
GSMUA_Achr7P15340_001 Banana mitochondrion 37.7 38.69
CDX93267 Canola plastid 37.06 38.67
CDY49576 Canola cytosol 33.55 38.11
CDY44645 Canola plastid 39.14 38.04
GSMUA_Achr10P... Banana cytosol 27.32 37.92
CDY64629 Canola plastid 38.82 37.79
CDX74848 Canola plastid 36.74 37.7
CDY64627 Canola plastid 38.66 37.46
CDY31722 Canola mitochondrion, plastid 34.03 36.6
GSMUA_Achr6P34400_001 Banana mitochondrion 35.3 36.59
CDX95128 Canola cytosol, nucleus, plastid 33.87 36.49
CDX74850 Canola plastid 39.14 36.35
CDX77195 Canola mitochondrion, plastid 33.55 35.96
CDX80235 Canola cytosol, nucleus, plastid 35.94 35.94
CDY04577 Canola plastid 30.83 35.54
CDY60967 Canola plastid 21.25 34.73
CDY44646 Canola cytosol 38.18 34.24
CDY02822 Canola cytosol 13.74 29.86
CDY60968 Canola cytosol 4.79 28.57
CDY02484 Canola cytosol 13.26 27.48
CDY50639 Canola cytosol 26.36 27.09
CDY28574 Canola cytosol 11.66 27.04
CDX68265 Canola cytosol 26.2 26.93
CDY10372 Canola cytosol 12.46 26.0
CDY04082 Canola cytosol 22.84 24.96
CDY44387 Canola cytosol 22.68 24.83
CDX97543 Canola cytoskeleton, cytosol, nucleus 24.28 24.6
CDX70300 Canola cytosol 24.76 24.53
CDY10374 Canola cytosol 24.92 24.45
CDX91635 Canola cytosol 24.6 24.37
CDY27076 Canola cytosol 24.6 24.37
CDX97230 Canola cytosol 7.35 24.34
CDX69666 Canola cytosol 7.35 24.34
CDX71629 Canola cytosol 25.72 24.1
CDY05812 Canola cytosol, plastid 25.56 23.88
CDY52262 Canola cytoskeleton, cytosol, nucleus 24.6 23.84
CDY61474 Canola cytosol 19.17 23.62
CDY02176 Canola cytosol 20.45 23.27
CDY60022 Canola cytosol 22.68 22.98
CDY44373 Canola cytosol 20.61 22.91
CDX86365 Canola cytosol 23.32 22.57
CDX85273 Canola cytosol 23.32 22.46
CDY10240 Canola cytosol 21.09 22.11
CDY06667 Canola cytosol 20.77 21.78
CDX78509 Canola nucleus 21.41 21.37
CDY69943 Canola cytosol 21.09 21.05
CDY70944 Canola cytosol 14.22 20.99
CDX78551 Canola nucleus 21.89 20.12
CDX70532 Canola nucleus 21.89 20.09
CDX69615 Canola cytosol, nucleus, plastid 21.57 19.71
CDY09840 Canola cytosol, nucleus, plastid 21.57 19.68
CDX85618 Canola nucleus 21.73 19.48
CDX91088 Canola cytosol, nucleus, vacuole 20.93 16.97
CDY23090 Canola nucleus 21.73 14.5
CDY02823 Canola cytosol 5.75 14.46
Protein Annotations
Gene3D:1.20.1280.170MapMan:22.6.3.1GO:A0A078F3G1UniProt:A0A078F3G1EnsemblPlants:CDY07931ProteinID:CDY07931
ProteinID:CDY07931.1InterPro:Cullin_repeat-like_dom_sfInterPro:Exo70GO:GO:0000145GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006887GO:GO:0008150GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00125134001PFAM:PF03081PANTHER:PTHR12542PANTHER:PTHR12542:SF38SUPFAM:SSF74788UniParc:UPI0004EE46C2
SEG:seg:::::
Description
BnaC03g35920DBnaC03g35920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3G1]
Coordinates
chrLK031982:+:175936..177816
Molecular Weight (calculated)
70745.1 Da
IEP (calculated)
8.494
GRAVY (calculated)
-0.315
Length
626 amino acids
Sequence
(BLAST)
001: MRTKTGFSFF SKITYPKKKP SPPIPKKGFD SSEIDLTIDN AAEIIEKWNT EYVSTTKFYS LFCESKREAK KFINGVKDLQ KSMDSLIKED PNSENLLRAQ
101: KLMQIAMKRL QSEFYQILSM NRAHLDPETV STYGQSSASR LAGDSIVEVE EVSRNSMKEL KSIAECMIAA GYAKECASTY KCFRKYIVDE GIHRLGVEKV
201: SSSKVKKMPS EVAEMKMRSW IDAVNVSMKT LFNGEKTLCD EVFEGCSVYL RESCFRDISK EGALLLLGFP ESVAVRDKKN PNPKKIFTLL DMYVTITENL
301: PAIESIFSFQ SVLAVRSQAL NSLNRLSESI LSHLVEFESE IRKDSSKTVV PGGGVHPMTT SSMDHLSRLA EYSGILVNII VKGSSSSAKA LLPKSYFNLS
401: ESDGWHHGSE VRVRFAWMVL VLLCKIDGKA EMYKDFSMQY LFLANNLQHV ASRARSTSLK HLLGDEWIER HFEKVGQFAR SYERLAWEPL ASMCPKTEEM
501: SPEEAKTQLE KFSECFESTC ESQSMCVVPD QTLLEEMRSS IAEKLLPVYR DFYNAHSNAA LLAGMGGGWN VRYTPEDVAK YLSSELFSGK GVLVEEKSCV
601: FRTSFGLVTA RNASRRKKRS LSCRRF
Best Arabidopsis Sequence Match ( AT3G09530.1 )
(BLAST)
001: MRSKSGFSFF SKMTSSRKRP SLSLPSKSHE STDVNKTIDN AAEIIEKWNT EYVSDKKFYS LFCESKRDAK KFVKRVKELQ NAMDLLIRED PNSEKLLRAQ
101: NLMQIAMKRL QKEFLQILSM NRAHLDPESI SSRSPTSVVS NDDDVWHESR SAGDSIIEVE EVSKNSRTEL KSIADCMIAA GCAKECATTY KSIRKSIVDE
201: SIYRLGVENI SSSKAKKMPC EVVELKMNRW IEAVKVSMKT LFNGEKTLCD EIFESSVSLR EFCFRDISKE GALLLFGFPE TITLRDKKNP HPEKIFPLLD
301: MYCTITDNLL AIEAIFSFPS ISNVRTQAHS SLSRLSESIL AHLMDFESQI RKDSSKTVVR GGGVHPMTIS AMNHISRLAE YSNALINILK GSSSSSSAKA
401: LLPKSYFNVS ESEESPVSEL KARFAWMILV LLCKIDGKAE MYKDFSMQYL FLANNLQHVV SRARSTNVKH VLGNDWIAKN SEKVRQFARS YERLAWGPLA
501: SMCPAISTSE AVEMSPEEAM MQFKKFNETF ESTCEAQSEC IVLDPKLLDE MRISIGRKLL PVYRDFYNAH RNAVMLAGTE GQWNVRYNPE DIGNHLSELF
601: SGKGISEKGY VCTPDFCVTT PTPTPVRKTR SLSCRRF
Arabidopsis Description
ATEXO70H3Exocyst subunit EXO70 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SF50]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.