CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035682.1-P	Field mustard	mitochondrion, plastid	99.66	96.67
CDX77195	Canola	mitochondrion, plastid	96.56	96.23
AT2G28640.1	Thale cress	mitochondrion	77.49	74.55
CDX93621	Canola	cytosol	43.47	56.35
CDX95128	Canola	cytosol, nucleus, plastid	54.47	54.56
CDY04577	Canola	plastid	46.05	49.36
CDY60967	Canola	plastid	32.13	48.83
CDY49576	Canola	cytosol	43.64	46.1
CDX88720	Canola	plastid	42.61	45.09
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	42.61	44.68
CDY68540	Canola	plastid	41.75	44.34
CDY60562	Canola	cytosol	41.92	44.12
VIT_06s0004g04010.t01	Wine grape	plastid	46.22	43.67
CDX80235	Canola	cytosol, nucleus, plastid	45.53	42.33
PGSC0003DMT400028204	Potato	plastid	42.61	41.54
Solyc06g005280.1.1	Tomato	plastid	42.1	40.97
KRH22988	Soybean	plastid	33.68	40.75
KRH25009	Soybean	mitochondrion	42.61	40.39
KRH29876	Soybean	mitochondrion	42.1	40.23
Solyc11g073010.1.1	Tomato	plastid	43.81	40.22
KRH10327	Soybean	plastid	40.21	39.46
PGSC0003DMT400078145	Potato	mitochondrion	42.1	39.26
KRH22987	Soybean	cytosol, mitochondrion, plastid	38.49	39.09
CDY60968	Canola	cytosol	7.04	39.05
GSMUA_AchrUn_...	Banana	cytosol	38.14	38.81
PGSC0003DMT400040200	Potato	plastid	40.21	38.81
Solyc06g075610.1.1	Tomato	plastid	40.89	38.2
GSMUA_Achr10P...	Banana	cytosol	29.55	38.14
CDY41604	Canola	cytosol	40.21	37.8
CDY41297	Canola	mitochondrion	39.35	37.66
CDY44712	Canola	cytosol	39.69	37.62
CDY07003	Canola	cytosol, golgi, mitochondrion, plastid	25.43	37.37
CDY40204	Canola	plastid	38.83	36.22
CDX73400	Canola	plastid	39.0	36.2
GSMUA_Achr10P...	Banana	mitochondrion	37.97	35.94
CDX76117	Canola	plastid	38.83	35.7
CDY02916	Canola	plastid	38.14	35.07
GSMUA_Achr7P15340_001	Banana	mitochondrion	36.6	34.92
CDX93267	Canola	plastid	35.57	34.5
CDY07931	Canola	cytosol	36.6	34.03
CDX74849	Canola	plastid	36.77	34.02
CDX74848	Canola	plastid	35.57	33.93
CDX73983	Canola	mitochondrion	36.08	33.87
CDY28574	Canola	cytosol	15.64	33.7
CDY44645	Canola	plastid	37.29	33.7
GSMUA_Achr6P34400_001	Banana	mitochondrion	34.71	33.44
CDY64627	Canola	plastid	36.94	33.28
CDY64629	Canola	plastid	36.77	33.28
CDY02484	Canola	cytosol	17.18	33.11
CDX74850	Canola	plastid	37.11	32.05
CDY44646	Canola	cytosol	36.08	30.09
CDY02822	Canola	cytosol	14.43	29.17
CDX68265	Canola	cytosol	28.35	27.09
CDY50639	Canola	cytosol	28.18	26.93
CDX71629	Canola	cytosol	29.9	26.05
CDY05812	Canola	cytosol, plastid	29.9	25.97
CDX69666	Canola	cytosol	8.42	25.93
CDX97230	Canola	cytosol	8.42	25.93
CDY04082	Canola	cytosol	25.43	25.83
CDY44387	Canola	cytosol	25.26	25.7
CDX97543	Canola	cytoskeleton, cytosol, nucleus	27.15	25.57
CDY61474	Canola	cytosol	21.82	25.0
CDY10372	Canola	cytosol	12.89	25.0
CDY52262	Canola	cytoskeleton, cytosol, nucleus	27.32	24.61
CDY60022	Canola	cytosol	25.26	23.79
CDX70300	Canola	cytosol	25.6	23.58
CDY10374	Canola	cytosol	25.6	23.35
CDY06667	Canola	cytosol	23.88	23.28
CDY44373	Canola	cytosol	22.51	23.27
CDY10240	Canola	cytosol	23.71	23.12
CDY27076	Canola	cytosol	25.09	23.1
CDX91635	Canola	cytosol	25.09	23.1
CDX86365	Canola	cytosol	24.91	22.41
CDY02176	Canola	cytosol	21.13	22.36
CDX78509	Canola	nucleus	23.88	22.17
CDX85273	Canola	cytosol	24.57	22.0
CDY69943	Canola	cytosol	23.54	21.85
CDY70944	Canola	cytosol	15.64	21.46
CDX78551	Canola	nucleus	23.2	19.82
CDX70532	Canola	nucleus	23.02	19.65
CDX85618	Canola	nucleus	23.02	19.2
CDY09840	Canola	cytosol, nucleus, plastid	22.34	18.95
CDX69615	Canola	cytosol, nucleus, plastid	22.16	18.83
CDX91088	Canola	cytosol, nucleus, vacuole	21.99	16.58
CDY02823	Canola	cytosol	5.84	13.65
CDY23090	Canola	nucleus	21.31	13.22

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	GO:A0A078H2H9	UniProt:A0A078H2H9	EnsemblPlants:CDY31722	ProteinID:CDY31722
ProteinID:CDY31722.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00050355001	InterPro:HEAT_type_2	InterPro:IPR021133	PFAM:PF03081	PFscan:PS50077	PANTHER:PTHR12542
PANTHER:PTHR12542:SF17	SUPFAM:SSF74788	UniParc:UPI0004EEE06F	SEG:seg	:	:

Description

BnaA04g16580DBnaA04g16580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2H9]

Coordinates

chrLK032278:-:57993..59795

Molecular Weight (calculated)

66090.2 Da

IEP (calculated)

8.280

GRAVY (calculated)

-0.220

Length

582 amino acids

Sequence
(BLAST)

001: MMLLFKPSTA HAKRSKPRPY QSFSESLLLD SIEATESFTK KWISQDHLSA CSSCTLSSIF STENRAEGRK FVDVINSLQY AIQGVTLVNP ESHKLTRAHN
101: LLSTAMKHLE KEFYRVLKSN RRNLDPESVS IRSIPSFNPR KKVSIYSNVP KSEEADIMTD LQMIADCMIS SGYENECVRT YKKIRRSIIV DSLSKLGFEN
201: LSFGKIQKLD WDSMEKNIKK WLEATKIVIN NLFDGERILC DHVFSTSPSV AESCFSEITL DSALTLFIFP VSVARCRKTA EKIFLTLDVY QTISNLLPRI
301: EEIFSYDSTS AVRFQAADSL RSLGEAINYM VAEFEASIAK EASKSVIPGG GVHPLTRYVM NFVVFLADYN ESLAGSDVGE TASTVTTRLG WLILVLLCKI
401: DTKSRIYENV ALSYLFLANN LHYVISKVRK SNLRVVLGDE WVANHQGKVS QYLEKYEKVA WGEVLTSLSE EERVVLEEDV AKERLKRFNE VFEEAFRKQS
501: GWVVPDTKMR EGLKDSVAKK LTYVASLFYE KYHVETWGDI VRYVPKDLGN YLSDLYLGTG RTCIPSFKPT ESGRSQLFQS GR

Best Arabidopsis Sequence Match ( AT2G28640.1 )
(BLAST)

001: MMLLFKPSLT LGRRIKPRPC QSFSESLLMD SIEAAETLTR KWISPDLSSS SSCSLSSIFS TDNRVEGRRF VEVINSLQYA IQGVVLVNPE SPKLTRAHNL
101: VTIAMKQLEK EFYRILKSNR RNLDPESVSV RSSPSFNARN KVSIYSQVPK SEEADVMTDL KMIADCMISS GYENECIKIY KKIRGSIMVK ALSNLGFENL
201: SFGKIQKLDW DSMEKNIKKW LEATKVLITN LFEGERILSD HVFSPSVSVA ESCFTEITLD SALTLFIFPV SVARCKKTVE KIFLTLDIYQ TISQLMPQIE
301: EIFSYDSTTA VRLQAADSLN NLGEEINSMV AEFEASITKE SSKTPIRGGS VHQLTRYVMN FIVFLADYHE CLAGVLTEST LPLPEDYFGN NDEDNNEGET
401: GSSSTVTTRI AWLILVLLCK IDTKSRMYND MALSYLFLAN NLHYVISKVR TSNMRVVLGD EWVTNHEGKV TQYLEKYEKI AWGEVITSLF DSNEEMLEEH
501: VAKERLMRFN EGFEEAFQKQ SEWVVPDSKL RDDLKDSVTE KLTTVTTTFY EKYHVENWEE VKFAPEDLDN YLSDLFLGTG RSCIIVPSLK QSDSGRSLKD
601: SESGR

Arabidopsis Description

ATEXO70H5Exocyst subunit exo70 family protein H5 [Source:UniProtKB/TrEMBL;Acc:F4IIS8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.