Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78551 | Canola | nucleus | 97.65 | 97.8 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 82.84 | 82.36 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 82.55 | 82.19 |
| AT5G13990.1 | Thale cress | nucleus | 83.72 | 82.16 |
| CDX85618 | Canola | nucleus | 83.58 | 81.66 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 80.35 | 70.98 |
| CDX69666 | Canola | cytosol | 18.04 | 65.08 |
| CDX97230 | Canola | cytosol | 17.89 | 64.55 |
| KRH70050 | Soybean | nucleus | 49.12 | 47.25 |
| Os12t0165600-01 | Rice | cytosol, plasma membrane | 33.87 | 47.24 |
| KRH06895 | Soybean | cytosol | 47.51 | 45.44 |
| KRG94595 | Soybean | nucleus | 46.63 | 44.73 |
| CDY69943 | Canola | cytosol | 41.06 | 44.66 |
| CDX78509 | Canola | nucleus | 40.91 | 44.5 |
| PGSC0003DMT400052043 | Potato | nucleus | 44.13 | 43.12 |
| CDY02822 | Canola | cytosol | 18.18 | 43.06 |
| GSMUA_Achr6P07200_001 | Banana | nucleus | 41.06 | 42.36 |
| Solyc02g094370.1.1 | Tomato | cytosol | 43.84 | 41.88 |
| CDY28574 | Canola | cytosol | 16.42 | 41.48 |
| CDY02484 | Canola | cytosol | 18.33 | 41.39 |
| GSMUA_Achr6P25750_001 | Banana | endoplasmic reticulum | 41.5 | 40.37 |
| TraesCS5B01G122500.1 | Wheat | plastid | 38.12 | 39.27 |
| Zm00001d023513_P001 | Maize | plastid | 38.56 | 38.51 |
| TraesCS4B01G112100.1 | Wheat | cytosol | 39.88 | 38.31 |
| Zm00001d041908_P001 | Maize | plastid | 37.68 | 37.96 |
| EES16704 | Sorghum | plastid | 38.56 | 37.68 |
| Zm00001d053192_P001 | Maize | cytosol, plastid | 37.68 | 37.63 |
| TraesCS4D01G109600.1 | Wheat | cytosol | 39.15 | 37.61 |
| TraesCS4A01G208500.1 | Wheat | cytosol | 39.0 | 37.57 |
| HORVU4Hr1G020050.1 | Barley | cytosol, plastid | 38.86 | 37.43 |
| Zm00001d004846_P001 | Maize | cytosol, plastid | 37.54 | 37.43 |
| Os11t0167600-00 | Rice | plasma membrane | 37.54 | 36.99 |
| EES08037 | Sorghum | cytosol, plastid | 36.8 | 36.54 |
| TraesCS5D01G130800.1 | Wheat | plastid | 37.83 | 35.83 |
| TraesCS5A01G122400.1 | Wheat | mitochondrion | 38.12 | 35.18 |
| GSMUA_Achr6P18090_001 | Banana | nucleus | 23.75 | 35.14 |
| CDY60022 | Canola | cytosol | 29.47 | 32.52 |
| CDY60968 | Canola | cytosol | 4.99 | 32.38 |
| CDY61474 | Canola | cytosol | 23.61 | 31.69 |
| CDY10372 | Canola | cytosol | 13.93 | 31.67 |
| CDX68265 | Canola | cytosol | 27.71 | 31.03 |
| CDY50639 | Canola | cytosol | 27.71 | 31.03 |
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 27.42 | 30.26 |
| CDX70300 | Canola | cytosol | 27.71 | 29.91 |
| CDY06667 | Canola | cytosol | 26.1 | 29.82 |
| CDY10374 | Canola | cytosol | 27.86 | 29.78 |
| HORVU5Hr1G039240.1 | Barley | plastid | 31.23 | 29.26 |
| CDY10240 | Canola | cytosol | 25.37 | 28.98 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 27.42 | 28.95 |
| CDY05812 | Canola | cytosol, plastid | 28.3 | 28.81 |
| CDX71629 | Canola | cytosol | 28.15 | 28.74 |
| CDY04082 | Canola | cytosol | 23.9 | 28.45 |
| CDY44373 | Canola | cytosol | 23.46 | 28.42 |
| CDY44387 | Canola | cytosol | 23.75 | 28.32 |
| CDY70944 | Canola | cytosol | 17.6 | 28.3 |
| CDX91635 | Canola | cytosol | 25.66 | 27.69 |
| CDY27076 | Canola | cytosol | 25.66 | 27.69 |
| CDY02176 | Canola | cytosol | 21.99 | 27.27 |
| CDX93621 | Canola | cytosol | 17.89 | 27.17 |
| CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 21.26 | 26.13 |
| CDX88720 | Canola | plastid | 20.97 | 26.0 |
| CDX86365 | Canola | cytosol | 24.63 | 25.97 |
| CDY68540 | Canola | plastid | 20.53 | 25.55 |
| CDY60562 | Canola | cytosol | 20.67 | 25.5 |
| CDX85273 | Canola | cytosol | 23.9 | 25.08 |
| CDY49576 | Canola | cytosol | 20.09 | 24.86 |
| CDY04577 | Canola | plastid | 19.21 | 24.13 |
| CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 13.64 | 23.48 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 19.94 | 23.41 |
| CDY44712 | Canola | cytosol | 20.97 | 23.29 |
| CDY31722 | Canola | mitochondrion, plastid | 19.65 | 23.02 |
| CDX77195 | Canola | mitochondrion, plastid | 19.5 | 22.77 |
| CDY41604 | Canola | cytosol | 20.53 | 22.62 |
| CDX80235 | Canola | cytosol, nucleus, plastid | 20.53 | 22.36 |
| CDX73983 | Canola | mitochondrion | 20.23 | 22.26 |
| CDX93267 | Canola | plastid | 19.5 | 22.17 |
| CDX74849 | Canola | plastid | 20.38 | 22.1 |
| CDY44645 | Canola | plastid | 20.82 | 22.05 |
| CDY41297 | Canola | mitochondrion | 19.65 | 22.04 |
| CDY40204 | Canola | plastid | 20.09 | 21.96 |
| CDY07931 | Canola | cytosol | 20.09 | 21.89 |
| CDX76117 | Canola | plastid | 20.23 | 21.8 |
| CDX73400 | Canola | plastid | 19.94 | 21.69 |
| CDY02916 | Canola | plastid | 20.09 | 21.64 |
| CDX74848 | Canola | plastid | 19.35 | 21.64 |
| CDY64627 | Canola | plastid | 20.38 | 21.52 |
| CDY60967 | Canola | plastid | 12.02 | 21.41 |
| CDY64629 | Canola | plastid | 19.79 | 21.0 |
| GSMUA_Achr10P... | Banana | cytosol | 23.9 | 20.95 |
| CDX74850 | Canola | plastid | 20.09 | 20.33 |
| CDY44646 | Canola | cytosol | 19.79 | 19.34 |
| CDY02823 | Canola | cytosol | 7.04 | 19.28 |
| CDY23090 | Canola | nucleus | 22.58 | 16.42 |
Protein Annotations
| Gene3D:1.20.1280.170 | MapMan:22.6.3.1 | GO:A0A078C1D2 | EnsemblPlants:CDX70532 | ProteinID:CDX70532 | ProteinID:CDX70532.1 |
| ncoils:Coil | InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00140363001 | PFAM:PF03081 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF82 | SUPFAM:SSF74788 | UniParc:UPI0004EEDDAB |
| SEG:seg | : | : | : | : | : |
Description
BnaC03g06160D
Coordinates
chrLK031791:-:899108..901156
Molecular Weight (calculated)
78220.8 Da
IEP (calculated)
4.540
GRAVY (calculated)
-0.700
Length
682 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKNDKDPDL HHDDDHNNDK SKEEEKGDTV SDDVDVDKKE NVDVSNAETD HVDPGDNAEK VVNSPLGQED APPEIPQTIE SLSEELDQLL TSLSLHKEEQ
101: KDVTEEEKGE DGNYFQIPQF VGKFLDLFED KLSKHDTVDP KTTLYQDPEE VSSLLEAVDR VSKLMELLLN TKSCLDHHES LINHAGSIQQ RAMAFLEDEF
201: RVLLEESVIK EPAVVTEDQQ DHHNDSQDQD NVNNVPEGDD EKIEYPGYSE EMVVLLRKIV EKMKGAGYGC ECKEAYLVGR RNILMRTLKQ DCEFEKVSID
301: EVQKMSWGEL EREIPIWNKT VKDCSSLFFP GELRLAEKIF PGDEGSLFNI VTHGLAIQFL GFAEAVAMTK RSTEKLFKIL DIYETLRDGF PAIEELFTEE
401: LRSELRSEVT SARSRLGETA INIFSDLENS IKSDSSKTPV PGGAVHPLTR YTMNYLKYSC EYKDTLEQVF KSHSKMEEEE STERAFANQL MRIMDLLDGN
501: MEAKSKLYKD IPLSCIFMMN NGRYIVQKIK GSAEIYEVMG DTWCRKRSSE LRTYHKNYQR ETWGKLLGFL GHEGLMHNNK IVKPNLKERF KSFNATFDEI
601: HKTQTTWVVN DEQLQSELRV SITAVMIPAY RAFMARFGQY LDPGRQTEKY VKYQPEDIED LIDQLFEGNT SSSSTATAKR RT
101: KDVTEEEKGE DGNYFQIPQF VGKFLDLFED KLSKHDTVDP KTTLYQDPEE VSSLLEAVDR VSKLMELLLN TKSCLDHHES LINHAGSIQQ RAMAFLEDEF
201: RVLLEESVIK EPAVVTEDQQ DHHNDSQDQD NVNNVPEGDD EKIEYPGYSE EMVVLLRKIV EKMKGAGYGC ECKEAYLVGR RNILMRTLKQ DCEFEKVSID
301: EVQKMSWGEL EREIPIWNKT VKDCSSLFFP GELRLAEKIF PGDEGSLFNI VTHGLAIQFL GFAEAVAMTK RSTEKLFKIL DIYETLRDGF PAIEELFTEE
401: LRSELRSEVT SARSRLGETA INIFSDLENS IKSDSSKTPV PGGAVHPLTR YTMNYLKYSC EYKDTLEQVF KSHSKMEEEE STERAFANQL MRIMDLLDGN
501: MEAKSKLYKD IPLSCIFMMN NGRYIVQKIK GSAEIYEVMG DTWCRKRSSE LRTYHKNYQR ETWGKLLGFL GHEGLMHNNK IVKPNLKERF KSFNATFDEI
601: HKTQTTWVVN DEQLQSELRV SITAVMIPAY RAFMARFGQY LDPGRQTEKY VKYQPEDIED LIDQLFEGNT SSSSTATAKR RT
001: MEKNDKDPDH DDKSKGDEKG DVVSDAHPSD DAHHQDGISN ENVDVVGNAE TDHQDPGDNN VDKVSQGEEA PEIRQTLESL SEELDQFLPT LSLHMEEHKD
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT
101: STEEKGEDGY FQIPQFVGKF LDLFEEKLSK YDSGEPKTVW YQDPEEVSSL LEAVDRVSKL MGLLLNTKSC LDHHESLINH AGSIQQRAMA FLEDEFRIIL
201: EESVTKESVV VTDDSNSQRR STADQQDHQN DVVVSQDHDQ MLVPECGDQE IEYPGYPEDV VVVLRKIAEK MKAGGYGWEC REVYLVGRRN ILMRTLKQDC
301: EFEKVSIDEV QKMSWDTLER EIPIWNKTFK DCSSLFFPGE LKLAERIFPG DEGNLFCIVT HGLAIQFLGF AEAVAMTRRS TEKLFKILDI YETLRDSFPA
401: MEELFPEELR SELRNEVTSA RSRLGETAIH IFCDLEHSIK SDSSKTPVPG GAVHPLTRYT MNYLKYSCEY KDTLEQVFKS HSKMEREEEE PVESGNSAFA
501: SQLMRIMELL DGNLETKSKQ YKDIPLSCIF MMNNGRYIVQ KIKGSAEIHE VMGDTWCRRR SSELRNYHKN YQRETWGKLL GFLGHEGLMH NGKIVKPNLK
601: ERFKSFNATF DEIHKTQTTW VVNDEQLQSE LRVSITAVMI PAYRAFMARF GQYLDPGRQT EKYVKYQPED IEDLIDQLFE GNTSSSSTAT ARRRT
Arabidopsis Description
ATEXO70C2EXO70C2 [Source:UniProtKB/TrEMBL;Acc:A0A178UPG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.