CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68540	Canola	plastid	96.93	97.81
Bra020294.1-P	Field mustard	cytosol, plastid	99.82	88.89
CDX88720	Canola	plastid	83.36	83.82
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	83.54	83.24
CDY49576	Canola	cytosol	82.82	83.12
CDX80235	Canola	cytosol, nucleus, plastid	82.28	72.68
AT5G59730.1	Thale cress	cytosol, plastid	81.74	71.29
CDX93621	Canola	cytosol	38.34	47.22
VIT_06s0004g04010.t01	Wine grape	plastid	52.26	46.92
CDY60968	Canola	cytosol	8.86	46.67
CDY04577	Canola	plastid	45.03	45.86
Solyc06g005280.1.1	Tomato	plastid	48.82	45.15
PGSC0003DMT400028204	Potato	plastid	48.28	44.72
KRH22988	Soybean	plastid	38.52	44.28
KRH29876	Soybean	mitochondrion	48.64	44.17
KRH10327	Soybean	plastid	46.84	43.68
KRH25009	Soybean	mitochondrion	48.46	43.65
CDX95128	Canola	cytosol, nucleus, plastid	45.39	43.2
KRH22987	Soybean	cytosol, mitochondrion, plastid	44.48	42.93
Solyc11g073010.1.1	Tomato	plastid	49.01	42.74
CDY60967	Canola	plastid	29.29	42.3
Solyc06g075610.1.1	Tomato	plastid	47.56	42.22
PGSC0003DMT400078145	Potato	mitochondrion	47.38	41.99
CDY31722	Canola	mitochondrion, plastid	44.12	41.92
CDX77195	Canola	mitochondrion, plastid	43.4	41.1
PGSC0003DMT400040200	Potato	plastid	44.67	40.96
GSMUA_Achr10P...	Banana	cytosol	33.27	40.8
CDY41297	Canola	mitochondrion	43.04	39.14
CDY41604	Canola	cytosol	43.76	39.1
CDY07003	Canola	cytosol, golgi, mitochondrion, plastid	27.85	38.89
CDY44712	Canola	cytosol	43.04	38.76
GSMUA_AchrUn_...	Banana	cytosol	39.96	38.64
GSMUA_Achr6P34400_001	Banana	mitochondrion	39.78	36.42
CDX74849	Canola	plastid	41.41	36.41
CDX74848	Canola	plastid	39.24	35.57
CDY64629	Canola	plastid	41.23	35.46
CDX73983	Canola	mitochondrion	39.6	35.32
CDX76117	Canola	plastid	40.33	35.23
CDY64627	Canola	plastid	41.05	35.14
CDY44645	Canola	plastid	40.69	34.94
CDX73400	Canola	plastid	39.6	34.93
CDY02916	Canola	plastid	39.96	34.91
CDY40204	Canola	plastid	39.06	34.62
CDY07931	Canola	cytosol	39.06	34.5
GSMUA_Achr7P15340_001	Banana	mitochondrion	37.79	34.26
GSMUA_Achr10P...	Banana	mitochondrion	37.97	34.15
CDX93267	Canola	plastid	36.71	33.83
CDX74850	Canola	plastid	41.23	33.83
CDY44646	Canola	cytosol	40.33	31.95
CDY02484	Canola	cytosol	17.18	31.46
CDY28574	Canola	cytosol	15.19	31.11
CDY02822	Canola	cytosol	15.37	29.51
CDY50639	Canola	cytosol	31.28	28.41
CDX68265	Canola	cytosol	31.1	28.24
CDX71629	Canola	cytosol	32.19	26.65
CDY05812	Canola	cytosol, plastid	32.19	26.57
CDY10372	Canola	cytosol	14.1	26.0
CDY04082	Canola	cytosol	26.58	25.65
CDY44387	Canola	cytosol	26.4	25.52
CDX97543	Canola	cytoskeleton, cytosol, nucleus	27.85	24.92
CDX70300	Canola	cytosol	27.85	24.37
CDY02176	Canola	cytosol	24.05	24.18
CDY44373	Canola	cytosol	24.59	24.16
CDX85273	Canola	cytosol	28.39	24.15
CDY10374	Canola	cytosol	27.85	24.14
CDY52262	Canola	cytoskeleton, cytosol, nucleus	28.03	23.99
CDX86365	Canola	cytosol	27.85	23.8
CDY60022	Canola	cytosol	26.58	23.79
CDY27076	Canola	cytosol	27.12	23.73
CDX91635	Canola	cytosol	27.12	23.73
CDX97230	Canola	cytosol	7.96	23.28
CDX69666	Canola	cytosol	7.96	23.28
CDY06667	Canola	cytosol	24.95	23.12
CDY61474	Canola	cytosol	21.16	23.03
CDY10240	Canola	cytosol	24.77	22.95
CDY70944	Canola	cytosol	16.82	21.93
CDY69943	Canola	cytosol	24.77	21.85
CDX78509	Canola	nucleus	24.77	21.85
CDX69615	Canola	cytosol, nucleus, plastid	25.68	20.73
CDX78551	Canola	nucleus	25.5	20.7
CDY09840	Canola	cytosol, nucleus, plastid	25.68	20.7
CDX70532	Canola	nucleus	25.5	20.67
CDX85618	Canola	nucleus	25.68	20.34
CDX91088	Canola	cytosol, nucleus, vacuole	24.23	17.36
CDY23090	Canola	nucleus	24.59	14.5
CDY02823	Canola	cytosol	5.61	12.45

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	GO:A0A078J9V4	UniProt:A0A078J9V4	EnsemblPlants:CDY60562	ProteinID:CDY60562
ProteinID:CDY60562.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00029761001	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF17	SUPFAM:SSF74788	UniParc:UPI0004EF15D4
SEG:seg	:	:	:	:	:

Description

BnaA02g06880DBnaA02g06880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9V4]

Coordinates

chrLK033893:+:10124..12078

Molecular Weight (calculated)

61949.7 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.214

Length

553 amino acids

Sequence
(BLAST)

001: MGKQLFRSSP PPEKQPAHQS LAETAVQECT SSINTVISKW TSSSSNEFLF STNSRHEAEE FVEAVKHLQS TMHRLVSVNA SSDKLVYAHN LMQSAMKLLE
101: SEFRRVFSGQ DSDAMDDLKT IADCMISTGY AKECVTVYKT VRKSIVEETL NNLAVERLTL HQVQKMDWET LESKIRSWLR AAKLAVRSLF FGERLLADHV
201: FSSSVNIVES SFTDITQEGA LTLFAFPENA AKIKKLSPEK MFRFLDMYET LASLYVEIET IFYFDSAAAV RSQVISSLTR LGDAVRTMMT AFETAIQKDT
301: SRTPVIGGGV HPLTRYVMNY LSFLVDYSES IADAYPEELY SSPVSVRIAW VILLTLCKID GKAQPYKDVA LSYLFLANNL QYVVVKVRTS NVKLLLGEDW
401: VVRHEGKVKQ YADKFEKLAW GKVLTSLPEY PAEEITPEEA KELLVRFDDE FEASYRKQIS WVIPDPKLRD WIKVSLSHKL MLVCTELYEI NRFGSGGDGF
501: NVRYTSEDIG NYLSDLYFGS RGSGSGSVST KGSGSGTGTG SSSTGKSRGG RSH

Best Arabidopsis Sequence Match ( AT5G59730.2 )
(BLAST)

001: MGKHLFRSSP PPEKPTAHLS LAESAVQECM SNINTVISKW TSPAASSSDD FLFSTNSRRE AEEFVTAVRH LQSTMHRLVS VNPSSEKLIY AQNLMQSAMK
101: LLESEFHRVL KANREYLDPE CVSVRSYRSS RFSTSTTTSV SDSEDESSYE ENADEEHRFS GGDSDAMDDL KMIADCMIST GYAKECVRVY KTVRKSIVDE
201: TLHNLQMERF NLHQVQKMDW EILESKIKTW LKAVKLAVRK LFFGERILAD HVFSSSGLIV ESSFTEITQE GALILFTFPE YASKIKKLTP EKMFRFLDMY
301: EALANLYVEI ESIFYFESAA AVRSQVINSL ARLGDATRLM MTDFESAIQK ETSKTPIIGG GVHPLTRYVM NYLSFLADYS DSIAAIFENW KLSVPTPLPD
401: SLYISGGDEA NPEDLYSSPV SVRIAWVILL TLCKIDGKAQ PYKDVALSYL FLANNLQYVV VKVRSSTLKV LLGDDWVFRH EEKVKLYADK FEKLAWGKVL
501: DLLPEIPTDE ISPEEAKVLV ARFNDEFETS YRKQTSWVIP DPKLRDQIKI TLSQKLMLVC TEFYRMNRFA YGMVGDNEAI SRYTPEDIGN YLSDLYFGSR
601: GSGSVSTAGG SGSGSGSGTV RVKLVADVVV IE

Arabidopsis Description

ATEXO70H7AT5g59730/mth12_130 [Source:UniProtKB/TrEMBL;Acc:Q9FN91]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.