CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001305.1-P	Field mustard	mitochondrion	100.0	100.0
CDY07931	Canola	cytosol	94.52	93.61
AT3G09530.1	Thale cress	mitochondrion	72.42	70.49
CDY41604	Canola	cytosol	54.68	54.77
CDY44712	Canola	cytosol	54.03	54.56
CDY41297	Canola	mitochondrion	52.9	53.95
VIT_08s0040g02730.t01	Wine grape	plastid	47.42	46.3
PGSC0003DMT400061494	Potato	plastid	45.0	43.94
KRG95862	Soybean	plastid	43.71	43.85
Solyc09g005840.1.1	Tomato	plastid	44.84	43.71
PGSC0003DMT400061435	Potato	plastid	45.32	43.7
Solyc09g005830.1.1	Tomato	plastid	44.68	43.42
PGSC0003DMT400061436	Potato	plastid	45.0	43.39
KRH67580	Soybean	plastid	43.71	42.68
KRH32349	Soybean	plastid	41.45	41.32
CDX73400	Canola	plastid	40.97	40.51
GSMUA_AchrUn_...	Banana	cytosol	37.1	40.21
KRH19755	Soybean	mitochondrion, plastid	34.03	40.04
CDX88720	Canola	plastid	35.48	40.0
CDY68540	Canola	plastid	35.32	39.96
CDY02916	Canola	plastid	40.65	39.81
CDX76117	Canola	plastid	40.65	39.81
CDY40204	Canola	plastid	40.0	39.74
CDY60562	Canola	cytosol	35.32	39.6
GSMUA_Achr10P...	Banana	mitochondrion	39.19	39.51
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	35.16	39.28
CDX93621	Canola	cytosol	27.9	38.53
CDX74849	Canola	plastid	39.03	38.47
CDY07003	Canola	cytosol, golgi, mitochondrion, plastid	24.52	38.38
GSMUA_Achr10P...	Banana	cytosol	27.74	38.14
CDY49576	Canola	cytosol	33.87	38.11
CDY44645	Canola	plastid	39.35	37.89
GSMUA_Achr7P15340_001	Banana	mitochondrion	37.26	37.87
CDX93267	Canola	plastid	36.61	37.83
CDY64629	Canola	plastid	38.87	37.48
CDY64627	Canola	plastid	38.55	37.0
CDX74848	Canola	plastid	36.29	36.89
GSMUA_Achr6P34400_001	Banana	mitochondrion	35.16	36.09
CDY31722	Canola	mitochondrion, plastid	33.87	36.08
CDX74850	Canola	plastid	39.03	35.91
CDX95128	Canola	cytosol, nucleus, plastid	33.55	35.8
CDX77195	Canola	mitochondrion, plastid	33.71	35.79
CDY04577	Canola	plastid	30.97	35.36
CDX80235	Canola	cytosol, nucleus, plastid	35.65	35.3
CDY60967	Canola	plastid	21.45	34.73
CDY44646	Canola	cytosol	38.06	33.81
CDY02822	Canola	cytosol	13.39	28.82
CDY60968	Canola	cytosol	4.68	27.62
CDY02484	Canola	cytosol	13.23	27.15
CDY50639	Canola	cytosol	26.29	26.77
CDY28574	Canola	cytosol	11.61	26.67
CDX68265	Canola	cytosol	26.13	26.6
CDY10372	Canola	cytosol	12.42	25.67
CDY04082	Canola	cytosol	22.9	24.78
CDY44387	Canola	cytosol	22.74	24.65
CDX97543	Canola	cytoskeleton, cytosol, nucleus	24.52	24.6
CDX71629	Canola	cytosol	26.13	24.25
CDX70300	Canola	cytosol	24.52	24.05
CDY05812	Canola	cytosol, plastid	25.97	24.03
CDY10374	Canola	cytosol	24.68	23.98
CDX91635	Canola	cytosol	24.35	23.89
CDY27076	Canola	cytosol	24.35	23.89
CDY52262	Canola	cytoskeleton, cytosol, nucleus	24.84	23.84
CDX69666	Canola	cytosol	7.26	23.81
CDX97230	Canola	cytosol	7.26	23.81
CDY02176	Canola	cytosol	20.65	23.27
CDY61474	Canola	cytosol	19.03	23.23
CDY44373	Canola	cytosol	20.65	22.74
CDX86365	Canola	cytosol	23.55	22.57
CDX85273	Canola	cytosol	23.55	22.46
CDY60022	Canola	cytosol	22.26	22.33
CDY10240	Canola	cytosol	21.45	22.28
CDY06667	Canola	cytosol	21.13	21.94
CDX78509	Canola	nucleus	21.29	21.05
CDY69943	Canola	cytosol	20.97	20.73
CDY70944	Canola	cytosol	13.87	20.28
CDX78551	Canola	nucleus	22.26	20.26
CDX70532	Canola	nucleus	22.26	20.23
CDX69615	Canola	cytosol, nucleus, plastid	21.94	19.85
CDY09840	Canola	cytosol, nucleus, plastid	21.94	19.83
CDX85618	Canola	nucleus	22.1	19.63
CDX91088	Canola	cytosol, nucleus, vacuole	21.13	16.97
CDY23090	Canola	nucleus	21.94	14.5
CDY02823	Canola	cytosol	5.65	14.06

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	GO:A0A078CG68	EnsemblPlants:CDX73983	ProteinID:CDX73983	ProteinID:CDX73983.1
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00111716001
PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF38	SUPFAM:SSF74788	UniParc:UPI00025405A3	SEG:seg

Description

BnaA03g30640D

Coordinates

chrLK031800:+:807477..809339

Molecular Weight (calculated)

69988.1 Da

IEP (calculated)

8.362

GRAVY (calculated)

-0.343

Length

620 amino acids

Sequence
(BLAST)

001: MRTKTGFSFF SKITYSKKKP SPTIPKKGLD SSEIDHTIDN AAEIIEKWNT EYVSTTKFYS LFCESKREAK KFINGVKDLQ KSMDTLIKED PNSENLLRAQ
101: KLMQIAMKRL QSEFYQILSM NRARLDPETG EDVRLAGDSI VEVEEVSRNS MKELKSIAEC MIAAGYAKEC ASTYKCFRKS IVDEGIHRLG VEKVSSSKVK
201: KMPSEVVEVK MRSWIDAVSV SMKTLFNGEK TLCDEVFEGC SVSLRESCFR DISKEGALLL LGFPESVAVR DKKTPNPKKI FTLLDMYGTI TENLQAIESI
301: FSFHSVSAVR SQALSSLNRL SESILSHLVE FESEIRKDSS KTVVPGGGVH PMTTSSMDHL SRLAEYSGIL VNIIVKGSSS SAKALLPKSY FNLSESDGCH
401: HGSEVRVRFA WMVLVLLCKI DGKAEMYKDF SMQYLFLANN LQHVASRARS TGLKHLLGDE WIERHFEKVG QFARSYERLA WEPLASMCPK TEEMSPEEAK
501: MRLEKFSECF ESTCQSQSAC VVPDQTLLEE MRSSIVEKLL PVYRDFYNAH SNAAMLAGTE GGWNVRYTPE DVAKYLSSEL FNGKGVLEEE KSCVFRTSFG
601: LVTARNSSRR KKRSLSCRRF

Best Arabidopsis Sequence Match ( AT3G09530.1 )
(BLAST)

001: MRSKSGFSFF SKMTSSRKRP SLSLPSKSHE STDVNKTIDN AAEIIEKWNT EYVSDKKFYS LFCESKRDAK KFVKRVKELQ NAMDLLIRED PNSEKLLRAQ
101: NLMQIAMKRL QKEFLQILSM NRAHLDPESI SSRSPTSVVS NDDDVWHESR SAGDSIIEVE EVSKNSRTEL KSIADCMIAA GCAKECATTY KSIRKSIVDE
201: SIYRLGVENI SSSKAKKMPC EVVELKMNRW IEAVKVSMKT LFNGEKTLCD EIFESSVSLR EFCFRDISKE GALLLFGFPE TITLRDKKNP HPEKIFPLLD
301: MYCTITDNLL AIEAIFSFPS ISNVRTQAHS SLSRLSESIL AHLMDFESQI RKDSSKTVVR GGGVHPMTIS AMNHISRLAE YSNALINILK GSSSSSSAKA
401: LLPKSYFNVS ESEESPVSEL KARFAWMILV LLCKIDGKAE MYKDFSMQYL FLANNLQHVV SRARSTNVKH VLGNDWIAKN SEKVRQFARS YERLAWGPLA
501: SMCPAISTSE AVEMSPEEAM MQFKKFNETF ESTCEAQSEC IVLDPKLLDE MRISIGRKLL PVYRDFYNAH RNAVMLAGTE GQWNVRYNPE DIGNHLSELF
601: SGKGISEKGY VCTPDFCVTT PTPTPVRKTR SLSCRRF

Arabidopsis Description

ATEXO70H3Exocyst subunit EXO70 family protein [Source:UniProtKB/TrEMBL;Acc:Q9SF50]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.