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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plastid
Predotar:mitochondrion
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74849 Canola plastid 94.71 96.82
CDY44645 Canola plastid 91.76 91.61
CDX74850 Canola plastid 92.53 88.28
CDX74848 Canola plastid 82.43 86.89
CDY64627 Canola plastid 86.63 86.22
AT2G39380.1 Thale cress plastid 76.83 77.55
CDY44646 Canola cytosol 81.49 75.07
CDY07003 Canola cytosol, golgi, mitochondrion, plastid 46.03 74.75
CDX93267 Canola plastid 69.36 74.33
CDY02916 Canola plastid 69.21 70.3
CDX76117 Canola plastid 69.21 70.3
CDY40204 Canola plastid 66.1 68.11
CDX73400 Canola plastid 66.25 67.94
VIT_00s0317g00140.t01 Wine grape plastid 50.7 52.41
Solyc05g054820.1.1 Tomato plastid 45.1 44.96
PGSC0003DMT400060448 Potato plastid 45.26 44.91
CDX88720 Canola plastid 36.08 42.18
CDY41604 Canola cytosol 40.59 42.16
CDY44712 Canola cytosol 39.97 41.86
CDX71078 Canola cytosol, mitochondrion, nucleus, plastid 35.93 41.62
CDY68540 Canola plastid 35.3 41.42
CDY60562 Canola cytosol 35.46 41.23
CDY41297 Canola mitochondrion 38.88 41.12
CDY49576 Canola cytosol 35.15 41.02
CDX93621 Canola cytosol 28.46 40.76
GSMUA_AchrUn_... Banana cytosol 36.08 40.56
GSMUA_Achr10P... Banana mitochondrion 37.79 39.51
CDY04577 Canola plastid 33.13 39.23
CDX73983 Canola mitochondrion 37.48 38.87
CDY07931 Canola cytosol 37.79 38.82
CDX80235 Canola cytosol, nucleus, plastid 37.64 38.66
GSMUA_Achr7P15340_001 Banana mitochondrion 36.39 38.36
CDX95128 Canola cytosol, nucleus, plastid 34.37 38.04
CDY60967 Canola plastid 22.39 37.6
CDX77195 Canola mitochondrion, plastid 33.44 36.82
CDY31722 Canola mitochondrion, plastid 33.28 36.77
GSMUA_Achr10P... Banana cytosol 25.66 36.59
GSMUA_Achr6P34400_001 Banana mitochondrion 33.75 35.93
CDY60968 Canola cytosol 5.44 33.33
CDY28574 Canola cytosol 12.6 30.0
CDY02484 Canola cytosol 13.84 29.47
CDY50639 Canola cytosol 27.06 28.57
CDX68265 Canola cytosol 26.91 28.41
CDX97543 Canola cytoskeleton, cytosol, nucleus 26.13 27.18
CDX97230 Canola cytosol 7.93 26.98
CDX69666 Canola cytosol 7.93 26.98
CDX71629 Canola cytosol 27.37 26.35
CDY52262 Canola cytoskeleton, cytosol, nucleus 26.44 26.32
CDY05812 Canola cytosol, plastid 27.37 26.27
CDY04082 Canola cytosol 23.17 26.0
CDY44387 Canola cytosol 23.02 25.87
CDY61474 Canola cytosol 20.37 25.79
CDY02176 Canola cytosol 21.15 24.73
CDY02822 Canola cytosol 11.04 24.65
CDX86365 Canola cytosol 24.42 24.27
CDX85273 Canola cytosol 24.42 24.15
CDY10374 Canola cytosol 23.17 23.35
CDX70300 Canola cytosol 22.86 23.26
CDY06667 Canola cytosol 21.15 22.78
CDY10372 Canola cytosol 10.58 22.67
CDY10240 Canola cytosol 21.0 22.61
CDY44373 Canola cytosol 19.44 22.2
CDX78509 Canola nucleus 21.62 22.17
CDY27076 Canola cytosol 21.77 22.15
CDX91635 Canola cytosol 21.77 22.15
CDY69943 Canola cytosol 21.31 21.85
CDY60022 Canola cytosol 20.84 21.68
CDX69615 Canola cytosol, nucleus, plastid 21.77 20.44
CDY09840 Canola cytosol, nucleus, plastid 21.62 20.26
CDY70944 Canola cytosol 13.06 19.81
CDX70532 Canola nucleus 21.0 19.79
CDX78551 Canola nucleus 20.84 19.68
CDX85618 Canola nucleus 21.0 19.34
CDX91088 Canola cytosol, nucleus, vacuole 21.0 17.49
CDY02823 Canola cytosol 6.07 15.66
CDY23090 Canola nucleus 22.24 15.25
Protein Annotations
Gene3D:1.20.1280.170MapMan:22.6.3.1GO:A0A078JDB4UniProt:A0A078JDB4EnsemblPlants:CDY64629ProteinID:CDY64629
ProteinID:CDY64629.1InterPro:Cullin_repeat-like_dom_sfInterPro:Exo70GO:GO:0000145GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006887GO:GO:0008150GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00042460001PFAM:PF03081PANTHER:PTHR12542PANTHER:PTHR12542:SF26SUPFAM:SSF74788UniParc:UPI0004EEAB2C
SEG:seg:::::
Description
BnaCnng44430DBnaCnng44430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDB4]
Coordinates
chrLK034505:+:20385..22316
Molecular Weight (calculated)
72723.5 Da
IEP (calculated)
7.458
GRAVY (calculated)
-0.197
Length
643 amino acids
Sequence
(BLAST)
001: MAKMAKTVTF SSFSSLSNLS SLPSFNSLPA SPLSTQTFSK SMMEEALESA ESIIRKWDPN SQSYTKIISL FRHSRKEAKE FIRCVRDLRK AMHFLVSQDS
101: KSDKLVLAQS LMQIGMSTME KEFFQILSSN RDHLDPDSAS GQSTISSNSE FEVYMEHDDD EDDELKKAGE SISQVEKASA LVMTDLKVIA ETMISCGYGK
201: ECIKSYKLIR KSIVDEGLHL LGIEKVKTSQ FHKMDWGVLE VMIKNWIKAA KIGVTTLFKG EKLLCDHVFS ASLTIGQSCF NQIAKEAGLN LFTLPELVSH
301: KEKKQHHHER IFKLMDLYAA ISDLWPDIEM IFSFDSLASV KTLVLSTLKK LKDSIHTCLK EFETTIHKDS SKELSPEGGV HKLTRTTMSF ISSLSEYSRV
401: LSEILAEHPL KKNSRLLESY FTAPILEDEH VNNQVCSVHI AWLILVFLCK LDTKAESYND VSLSYIFLVN NLQFVIDTVR SSQLKNLIGD DWLTKHEAKL
501: KSYAEKYEKA AWTNVFVSLP AKTSAKLSPE EATTCFKRFH AAFAGAYLKQ SSCIIVDAKL RDDLKVSIAR KLVPEYREFY EKYLPMLRQD RNIEMLVCFK
601: PDNLENYLSD LFHGTPMLSG SSHSAASASL SSPSCFSIRC VKH
Best Arabidopsis Sequence Match ( AT2G39380.1 )
(BLAST)
001: MSKKPKSVHF STSSPKSFLS SFPSFTSLPA SPLNQTFSQS MMEETVEAAE SIIKKWDPNS PSYTKIISLF SHSRREAKEF IRCIRDLRRA MHFLISQHSK
101: SAKLVLAQHL MQIAMARLEK EFFQILSSNR DQLDPESVSG HSSISSNSEF EDVMQSSDDE EEDELKKAGE TITKVEKAAA LVMSDLKVIA ETMISCGYGK
201: ECIKSYKLIR KSIVDEGLHL LGIEKCKISR FNRMDWDVLE HMIKNWIKAA KIGVITLLRG EKLLCDHVFS ASSTIRESCF YEIVNEAGIN LFKFPELVAE
301: KKPSPERIFR LMDLYAAISD LRPDIELIFH FDSVAAVKTL VLSSLKKLKD SIYTSLMEFE STIQKDSSKA LTAGGGIHKL TRSTMSFISS LSEYSRVLSE
401: ILAEHPLKKN TRMLESYFTA PILEDEHNNH AVSVHLAWLI LIFLCKLDIK AESYKDVSLS YLFLVNNIQF VVDTVRSTHL RNLLGDDWLT KHEAKLRSYA
501: ANYEIAAWAN VYISLPEKTS SRLSPEEAKT HFKRFHAVFE EAYMKQSSCV ITDAKLRNEL KVSIAKKIVP EYREFYGKYL PTLSKERNIE MLVSFKPDNL
601: ENYLSDLFHG TPILSGSSSS SSSLSSSSCI SLGCVRN
Arabidopsis Description
ATEXO70H2Exocyst subunit exo70 family protein H2 [Source:UniProtKB/TrEMBL;Acc:O80625]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.