CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07003	Canola	cytosol, golgi, mitochondrion, plastid	61.83	93.69
AT2G39380.1	Thale cress	plastid	80.17	75.51
CDX74849	Canola	plastid	74.5	71.07
CDY44645	Canola	plastid	74.5	69.41
CDY64629	Canola	plastid	74.33	69.36
CDY64627	Canola	plastid	72.5	67.34
CDX74848	Canola	plastid	68.33	67.21
CDX76117	Canola	plastid	69.67	66.03
CDX74850	Canola	plastid	74.0	65.88
CDY02916	Canola	plastid	69.33	65.72
CDY40204	Canola	plastid	67.5	64.9
CDX73400	Canola	plastid	67.5	64.59
CDY44646	Canola	cytosol	68.5	58.88
VIT_00s0317g00140.t01	Wine grape	plastid	49.0	47.27
PGSC0003DMT400060448	Potato	plastid	47.17	43.67
Solyc05g054820.1.1	Tomato	plastid	46.0	42.79
CDX93621	Canola	cytosol	29.83	39.87
CDY41604	Canola	cytosol	40.5	39.26
CDY44712	Canola	cytosol	39.83	38.93
CDY41297	Canola	mitochondrion	39.17	38.65
GSMUA_Achr10P...	Banana	mitochondrion	38.83	37.89
CDX88720	Canola	plastid	34.33	37.45
GSMUA_AchrUn_...	Banana	cytosol	35.5	37.24
CDY68540	Canola	plastid	34.0	37.23
CDY49576	Canola	cytosol	34.17	37.21
CDY07931	Canola	cytosol	38.67	37.06
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	34.17	36.94
CDY60562	Canola	cytosol	33.83	36.71
CDX73983	Canola	mitochondrion	37.83	36.61
CDY60968	Canola	cytosol	6.33	36.19
GSMUA_Achr7P15340_001	Banana	mitochondrion	36.33	35.74
GSMUA_Achr10P...	Banana	cytosol	26.83	35.7
CDY31722	Canola	mitochondrion, plastid	34.5	35.57
CDY04577	Canola	plastid	32.17	35.54
CDX80235	Canola	cytosol, nucleus, plastid	37.0	35.46
CDX77195	Canola	mitochondrion, plastid	34.5	35.45
CDX95128	Canola	cytosol, nucleus, plastid	33.83	34.94
GSMUA_Achr6P34400_001	Banana	mitochondrion	34.33	34.11
CDY60967	Canola	plastid	20.83	32.64
CDY28574	Canola	cytosol	13.67	30.37
CDY02484	Canola	cytosol	14.67	29.14
CDX68265	Canola	cytosol	29.33	28.9
CDY50639	Canola	cytosol	29.17	28.74
CDX69666	Canola	cytosol	9.0	28.57
CDX97230	Canola	cytosol	9.0	28.57
CDY02822	Canola	cytosol	13.5	28.12
CDX97543	Canola	cytoskeleton, cytosol, nucleus	27.83	27.02
CDY52262	Canola	cytoskeleton, cytosol, nucleus	28.0	26.01
CDX71629	Canola	cytosol	28.5	25.6
CDY05812	Canola	cytosol, plastid	28.5	25.52
CDY61474	Canola	cytosol	21.5	25.39
CDY04082	Canola	cytosol	24.17	25.31
CDY44387	Canola	cytosol	24.0	25.17
CDY02176	Canola	cytosol	22.5	24.55
CDX86365	Canola	cytosol	25.0	23.18
CDY06667	Canola	cytosol	23.0	23.12
CDY10240	Canola	cytosol	22.67	22.78
CDX85273	Canola	cytosol	24.5	22.62
CDY10374	Canola	cytosol	24.0	22.57
CDX70300	Canola	cytosol	23.67	22.47
CDY10372	Canola	cytosol	11.17	22.33
CDY27076	Canola	cytosol	23.33	22.15
CDX91635	Canola	cytosol	23.33	22.15
CDX78509	Canola	nucleus	22.83	21.85
CDY60022	Canola	cytosol	22.5	21.84
CDY69943	Canola	cytosol	22.5	21.53
CDY44373	Canola	cytosol	20.17	21.49
CDX69615	Canola	cytosol, nucleus, plastid	23.0	20.15
CDY09840	Canola	cytosol, nucleus, plastid	22.83	19.97
CDX70532	Canola	nucleus	22.17	19.5
CDX78551	Canola	nucleus	22.0	19.38
CDX85618	Canola	nucleus	22.33	19.2
CDY70944	Canola	cytosol	13.33	18.87
CDX91088	Canola	cytosol, nucleus, vacuole	22.0	17.1
CDY23090	Canola	nucleus	23.33	14.93
CDY02823	Canola	cytosol	5.5	13.25

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	GO:A0A078DWG0	EnsemblPlants:CDX93267	ProteinID:CDX93267	ProteinID:CDX93267.1
ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
EnsemblPlantsGene:GSBRNA2T00155225001	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF26	SUPFAM:SSF74788	UniParc:UPI0004EE557F
SEG:seg	:	:	:	:	:

Description

BnaC04g46290D

Coordinates

chrLK031875:+:650366..652255

Molecular Weight (calculated)

68166.3 Da

IEP (calculated)

8.208

GRAVY (calculated)

-0.181

Length

600 amino acids

Sequence
(BLAST)

001: MAKQAKCVTF STPSPKSIMS SLSSSTSFSQ SPLNQTFSLS MVEETLDSTE PIIKKWDPNT KTISLFSHSR KQAKEFIRCI AMSRLEKEFF MILSSNLDQL
101: DPESVSGHSS ISSYSEFEYV MQSDDEMEKA SESISEVEKA SALVMSDLKV IAETMISCGY GKECIKSYKM IRKSIVDEGL HLLRIQKCKI SLFNRTDWSV
201: LEPMIKNWIK AAKIGVTTLF RGEKLLCDHV FSASTTIRHT CFYEIANEAG LNLFSLPELV SNKEKKKLPE RIFKLMDLYA AISDLRPDIE LIFHFDSVAP
301: VKTLAISSLK KFKNSIHTCL TEFELKIKKD SSKALTPGGG IHKLTRTTMS FISSLSEYSR VLAEILAEHA IKRNTRLLES YFTAPILEDE HINHHATSVH
401: IAWLILVLLC KLDIKAESYK DVSLSYLFLV NNIRLVVDTV RSTHHLRNLL GDDWLTKHEA KLRSYTTNYE NVAWAKVYQT VPARTSTTLS PDQAKTHFKR
501: FHVAFEEAYM KQSSCVILDA KLRDEFKVSI ARKLVPEYKE FYQKYLPMLR EEINIEMLVR FKPDNLENYL SDLFHGTPML SDSSSASSSS SSMSISLGCG

Best Arabidopsis Sequence Match ( AT2G39380.1 )
(BLAST)

001: MSKKPKSVHF STSSPKSFLS SFPSFTSLPA SPLNQTFSQS MMEETVEAAE SIIKKWDPNS PSYTKIISLF SHSRREAKEF IRCIRDLRRA MHFLISQHSK
101: SAKLVLAQHL MQIAMARLEK EFFQILSSNR DQLDPESVSG HSSISSNSEF EDVMQSSDDE EEDELKKAGE TITKVEKAAA LVMSDLKVIA ETMISCGYGK
201: ECIKSYKLIR KSIVDEGLHL LGIEKCKISR FNRMDWDVLE HMIKNWIKAA KIGVITLLRG EKLLCDHVFS ASSTIRESCF YEIVNEAGIN LFKFPELVAE
301: KKPSPERIFR LMDLYAAISD LRPDIELIFH FDSVAAVKTL VLSSLKKLKD SIYTSLMEFE STIQKDSSKA LTAGGGIHKL TRSTMSFISS LSEYSRVLSE
401: ILAEHPLKKN TRMLESYFTA PILEDEHNNH AVSVHLAWLI LIFLCKLDIK AESYKDVSLS YLFLVNNIQF VVDTVRSTHL RNLLGDDWLT KHEAKLRSYA
501: ANYEIAAWAN VYISLPEKTS SRLSPEEAKT HFKRFHAVFE EAYMKQSSCV ITDAKLRNEL KVSIAKKIVP EYREFYGKYL PTLSKERNIE MLVSFKPDNL
601: ENYLSDLFHG TPILSGSSSS SSSLSSSSCI SLGCVRN

Arabidopsis Description

ATEXO70H2Exocyst subunit exo70 family protein H2 [Source:UniProtKB/TrEMBL;Acc:O80625]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.