CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74849	Canola	plastid	89.91	92.05
CDY64629	Canola	plastid	91.61	91.76
CDX74850	Canola	plastid	93.48	89.32
CDX74848	Canola	plastid	81.06	85.57
CDY64627	Canola	plastid	85.25	84.98
CDY44646	Canola	cytosol	86.18	79.51
AT2G39380.1	Thale cress	plastid	77.64	78.49
CDY07003	Canola	cytosol, golgi, mitochondrion, plastid	46.12	75.0
CDX93267	Canola	plastid	69.41	74.5
CDX76117	Canola	plastid	68.94	70.14
CDY02916	Canola	plastid	68.79	69.98
CDX73400	Canola	plastid	66.61	68.42
CDY40204	Canola	plastid	66.15	68.27
VIT_00s0317g00140.t01	Wine grape	plastid	49.84	51.61
PGSC0003DMT400060448	Potato	plastid	45.19	44.91
Solyc05g054820.1.1	Tomato	plastid	44.72	44.65
CDY41604	Canola	cytosol	40.06	41.68
CDX88720	Canola	plastid	35.4	41.45
CDY44712	Canola	cytosol	39.44	41.37
CDX93621	Canola	cytosol	28.73	41.2
CDY41297	Canola	mitochondrion	38.66	40.95
GSMUA_AchrUn_...	Banana	cytosol	36.34	40.91
CDX71078	Canola	cytosol, mitochondrion, nucleus, plastid	35.25	40.9
CDY68540	Canola	plastid	34.78	40.88
CDY60562	Canola	cytosol	34.94	40.69
CDY49576	Canola	cytosol	34.78	40.65
GSMUA_Achr10P...	Banana	mitochondrion	38.04	39.84
GSMUA_Achr7P15340_001	Banana	mitochondrion	37.42	39.51
CDX73983	Canola	mitochondrion	37.89	39.35
CDY07931	Canola	cytosol	38.04	39.14
CDX80235	Canola	cytosol, nucleus, plastid	37.42	38.5
CDY04577	Canola	plastid	32.45	38.49
CDX95128	Canola	cytosol, nucleus, plastid	34.16	37.87
CDX77195	Canola	mitochondrion, plastid	33.85	37.33
CDY31722	Canola	mitochondrion, plastid	33.7	37.29
GSMUA_Achr10P...	Banana	cytosol	25.78	36.81
CDY60967	Canola	plastid	21.58	36.29
GSMUA_Achr6P34400_001	Banana	mitochondrion	34.01	36.26
CDY60968	Canola	cytosol	5.59	34.29
CDY28574	Canola	cytosol	12.73	30.37
CDY02484	Canola	cytosol	13.82	29.47
CDY50639	Canola	cytosol	27.17	28.74
CDX68265	Canola	cytosol	27.02	28.57
CDX97543	Canola	cytoskeleton, cytosol, nucleus	26.55	27.67
CDX97230	Canola	cytosol	7.92	26.98
CDX69666	Canola	cytosol	7.92	26.98
CDY52262	Canola	cytoskeleton, cytosol, nucleus	26.86	26.78
CDX71629	Canola	cytosol	27.64	26.65
CDY05812	Canola	cytosol, plastid	27.64	26.57
CDY04082	Canola	cytosol	23.6	26.53
CDY44387	Canola	cytosol	23.45	26.4
CDY61474	Canola	cytosol	20.65	26.18
CDY02822	Canola	cytosol	11.49	25.69
CDY02176	Canola	cytosol	21.43	25.09
CDX86365	Canola	cytosol	24.53	24.42
CDX85273	Canola	cytosol	24.38	24.15
CDX70300	Canola	cytosol	23.14	23.58
CDY10374	Canola	cytosol	23.29	23.51
CDY06667	Canola	cytosol	21.74	23.45
CDY10240	Canola	cytosol	21.58	23.28
CDY44373	Canola	cytosol	20.03	22.91
CDY27076	Canola	cytosol	22.36	22.78
CDX91635	Canola	cytosol	22.36	22.78
CDY10372	Canola	cytosol	10.56	22.67
CDX78509	Canola	nucleus	22.05	22.65
CDY69943	Canola	cytosol	21.74	22.33
CDY60022	Canola	cytosol	21.12	22.01
CDX69615	Canola	cytosol, nucleus, plastid	23.29	21.9
CDY09840	Canola	cytosol, nucleus, plastid	22.98	21.57
CDX70532	Canola	nucleus	22.05	20.82
CDX78551	Canola	nucleus	21.89	20.7
CDX85618	Canola	nucleus	22.05	20.34
CDY70944	Canola	cytosol	13.04	19.81
CDX91088	Canola	cytosol, nucleus, vacuole	21.89	18.26
CDY23090	Canola	nucleus	22.36	15.35
CDY02823	Canola	cytosol	5.75	14.86

Protein Annotations

MapMan:22.6.3.1	GO:A0A078I1B5	UniProt:A0A078I1B5	EnsemblPlants:CDY44645	ProteinID:CDY44645	ProteinID:CDY44645.1
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00080608001
PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF26	SUPFAM:SSF74788	UniParc:UPI0004EED7E7	SEG:seg

Description

BnaC04g06170DBnaC04g06170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1B5]

Coordinates

chrLK032597:-:215179..217113

Molecular Weight (calculated)

72876.9 Da

IEP (calculated)

7.647

GRAVY (calculated)

-0.190

Length

644 amino acids

Sequence
(BLAST)

001: MVKMAKSVTF STSSSASNLS SPSFASLPAS PLNQPFSQSM MEEALESAES IIKKWDPKAQ SYTKIISLFR HSRKQAKEFI RCVRDLRRAM HFLVSQDSKS
101: DKLVLAQSLM QIGMSTLEKE FFQILSSNRD HLDPDSASGQ STISSNSEFE VYMEYDEDED DDDELKKAGE SISQVEKASA MVMSDLKVIA ETMISCGYGK
201: ECIKSYKLIR KSIVDEGLHL LGIEKVKTSH FHKMDWGVLE HMIKNWIKAA KIGVTTLFKG EKLLCDHVFS ASLTIGQSCF NQIAKEAGLN LFMLPELVAY
301: KEKKQHHHER IFKLMDLYAA ISDLWPDIEM IFSFDSLASV KTLVLSTLKK LKDSIHTCLK EFEKMIHKDS SKELSPEGGV HKLTRTTMSF LSLLSEYSRV
401: HVLSEILTEH PLKTNTRLLE SYFTAPILED EHVNNHACSV HLAWLILVFL CKLDTKAESY NDVSLSYIFL VNNMQFVADT VRSSHLKNLL GDDWLTKHEA
501: KLKSYAEKYE KTAWANVLVS LPAKTSAKLS PVEATTCFKR FHAAFAGAYL KQSSCVIVDA KLRDELKVSI VKKLVPEYRE FYVKYLPMLR QDRNIEMLVS
601: FKPDNLENYL SDLFHGTPML SGSSHSASAS LSSPSCFSIR CVKH

Best Arabidopsis Sequence Match ( AT2G39380.1 )
(BLAST)

001: MSKKPKSVHF STSSPKSFLS SFPSFTSLPA SPLNQTFSQS MMEETVEAAE SIIKKWDPNS PSYTKIISLF SHSRREAKEF IRCIRDLRRA MHFLISQHSK
101: SAKLVLAQHL MQIAMARLEK EFFQILSSNR DQLDPESVSG HSSISSNSEF EDVMQSSDDE EEDELKKAGE TITKVEKAAA LVMSDLKVIA ETMISCGYGK
201: ECIKSYKLIR KSIVDEGLHL LGIEKCKISR FNRMDWDVLE HMIKNWIKAA KIGVITLLRG EKLLCDHVFS ASSTIRESCF YEIVNEAGIN LFKFPELVAE
301: KKPSPERIFR LMDLYAAISD LRPDIELIFH FDSVAAVKTL VLSSLKKLKD SIYTSLMEFE STIQKDSSKA LTAGGGIHKL TRSTMSFISS LSEYSRVLSE
401: ILAEHPLKKN TRMLESYFTA PILEDEHNNH AVSVHLAWLI LIFLCKLDIK AESYKDVSLS YLFLVNNIQF VVDTVRSTHL RNLLGDDWLT KHEAKLRSYA
501: ANYEIAAWAN VYISLPEKTS SRLSPEEAKT HFKRFHAVFE EAYMKQSSCV ITDAKLRNEL KVSIAKKIVP EYREFYGKYL PTLSKERNIE MLVSFKPDNL
601: ENYLSDLFHG TPILSGSSSS SSSLSSSSCI SLGCVRN

Arabidopsis Description

ATEXO70H2Exocyst subunit exo70 family protein H2 [Source:UniProtKB/TrEMBL;Acc:O80625]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.