Subcellular Localization
min:
: max
Winner_takes_all: cytoskeleton, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 93.81 | 98.06 |
| Bra027373.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 92.11 | 96.28 |
| AT3G14090.1 | Thale cress | cytoskeleton, cytosol, nucleus | 80.34 | 83.31 |
| CDY02484 | Canola | cytosol | 37.0 | 79.14 |
| CDY28574 | Canola | cytosol | 32.04 | 76.67 |
| CDY61474 | Canola | cytosol | 55.42 | 70.47 |
| CDX68265 | Canola | cytosol | 58.82 | 62.4 |
| CDY50639 | Canola | cytosol | 58.67 | 62.23 |
| GSMUA_Achr9P14390_001 | Banana | cytosol | 52.63 | 60.07 |
| GSMUA_Achr10P... | Banana | cytosol | 52.94 | 58.36 |
| OQU89565 | Sorghum | cytosol | 52.79 | 54.82 |
| Os09t0439600-01 | Rice | cytosol | 53.87 | 54.55 |
| EES13957 | Sorghum | cytosol | 52.32 | 53.48 |
| Zm00001d020617_P001 | Maize | cytosol | 52.79 | 53.45 |
| Zm00001d005816_P001 | Maize | cytosol | 52.63 | 53.38 |
| Zm00001d032075_P001 | Maize | cytosol | 51.86 | 53.09 |
| TraesCS5B01G210700.1 | Wheat | cytosol | 48.76 | 52.76 |
| TraesCS5A01G213100.1 | Wheat | cytosol | 48.76 | 52.68 |
| TraesCS7B01G182000.2 | Wheat | cytosol | 51.39 | 51.96 |
| Zm00001d050095_P001 | Maize | cytosol | 50.31 | 51.92 |
| TraesCS5D01G218900.1 | Wheat | cytosol | 48.3 | 51.91 |
| TraesCS7D01G290600.1 | Wheat | cytosol | 51.55 | 51.79 |
| TraesCS7A01G290900.2 | Wheat | cytosol | 51.39 | 51.71 |
| GSMUA_Achr10P... | Banana | cytosol | 44.58 | 51.34 |
| HORVU5Hr1G062200.3 | Barley | cytosol | 52.94 | 48.65 |
| CDX69666 | Canola | cytosol | 13.31 | 45.5 |
| CDX97230 | Canola | cytosol | 13.31 | 45.5 |
| Os08t0455700-01 | Rice | cytosol | 2.48 | 44.44 |
| HORVU7Hr1G064400.2 | Barley | cytosol | 45.98 | 42.19 |
| CDY02822 | Canola | cytosol | 16.56 | 37.15 |
| CDY05812 | Canola | cytosol, plastid | 35.91 | 34.63 |
| CDX71629 | Canola | cytosol | 35.76 | 34.58 |
| CDY10372 | Canola | cytosol | 15.79 | 34.0 |
| CDY44387 | Canola | cytosol | 30.03 | 33.92 |
| CDY04082 | Canola | cytosol | 29.88 | 33.68 |
| CDY60022 | Canola | cytosol | 29.41 | 30.74 |
| CDX93621 | Canola | cytosol | 21.21 | 30.51 |
| CDX86365 | Canola | cytosol | 30.34 | 30.29 |
| CDX85273 | Canola | cytosol | 30.03 | 29.85 |
| CDY02176 | Canola | cytosol | 25.23 | 29.64 |
| CDX70300 | Canola | cytosol | 28.95 | 29.59 |
| CDY04577 | Canola | plastid | 24.77 | 29.47 |
| CDX78509 | Canola | nucleus | 28.48 | 29.35 |
| CDY69943 | Canola | cytosol | 28.48 | 29.35 |
| CDY10374 | Canola | cytosol | 28.95 | 29.31 |
| CDY44373 | Canola | cytosol | 25.39 | 29.13 |
| CDY68540 | Canola | plastid | 24.46 | 28.83 |
| CDX88720 | Canola | plastid | 24.46 | 28.73 |
| CDX71078 | Canola | cytosol, mitochondrion, nucleus, plastid | 24.61 | 28.65 |
| CDY10240 | Canola | cytosol | 26.47 | 28.64 |
| CDY60968 | Canola | cytosol | 4.64 | 28.57 |
| CDY27076 | Canola | cytosol | 27.86 | 28.48 |
| CDX91635 | Canola | cytosol | 27.86 | 28.48 |
| CDY06667 | Canola | cytosol | 26.32 | 28.48 |
| CDY60967 | Canola | plastid | 16.87 | 28.46 |
| CDY49576 | Canola | cytosol | 23.99 | 28.13 |
| CDY70944 | Canola | cytosol | 18.42 | 28.07 |
| CDY07003 | Canola | cytosol, golgi, mitochondrion, plastid | 17.18 | 28.03 |
| CDY60562 | Canola | cytosol | 23.99 | 28.03 |
| CDX93267 | Canola | plastid | 26.01 | 28.0 |
| CDY41297 | Canola | mitochondrion | 26.16 | 27.8 |
| CDX78551 | Canola | nucleus | 29.1 | 27.61 |
| CDX70532 | Canola | nucleus | 28.95 | 27.42 |
| CDY31722 | Canola | mitochondrion, plastid | 24.61 | 27.32 |
| CDX95128 | Canola | cytosol, nucleus, plastid | 24.46 | 27.19 |
| CDY44712 | Canola | cytosol | 25.7 | 27.04 |
| CDX73400 | Canola | plastid | 26.16 | 26.95 |
| CDY40204 | Canola | plastid | 26.01 | 26.92 |
| CDY44645 | Canola | plastid | 26.78 | 26.86 |
| CDY41604 | Canola | cytosol | 25.7 | 26.82 |
| CDX77195 | Canola | mitochondrion, plastid | 24.15 | 26.71 |
| CDX74849 | Canola | plastid | 26.01 | 26.71 |
| CDY09840 | Canola | cytosol, nucleus, plastid | 28.17 | 26.53 |
| CDY64629 | Canola | plastid | 26.32 | 26.44 |
| CDX74848 | Canola | plastid | 24.92 | 26.39 |
| CDX69615 | Canola | cytosol, nucleus, plastid | 27.86 | 26.28 |
| CDY02916 | Canola | plastid | 25.7 | 26.22 |
| CDX76117 | Canola | plastid | 25.54 | 26.07 |
| CDY64627 | Canola | plastid | 25.85 | 25.85 |
| CDX85618 | Canola | nucleus | 27.86 | 25.79 |
| CDX80235 | Canola | cytosol, nucleus, plastid | 24.46 | 25.24 |
| CDX74850 | Canola | plastid | 26.16 | 25.07 |
| CDX73983 | Canola | mitochondrion | 23.84 | 24.84 |
| CDY07931 | Canola | cytosol | 23.84 | 24.6 |
| CDY44646 | Canola | cytosol | 26.47 | 24.5 |
| Zm00001d050972_P005 | Maize | cytosol, peroxisome, plasma membrane | 44.58 | 23.21 |
| CDX91088 | Canola | cytosol, nucleus, vacuole | 27.09 | 22.67 |
| CDY02823 | Canola | cytosol | 7.74 | 20.08 |
| CDY23090 | Canola | nucleus | 26.16 | 18.02 |
Protein Annotations
| MapMan:22.6.3.1 | GO:A0A078IQQ3 | UniProt:A0A078IQQ3 | EnsemblPlants:CDY52262 | ProteinID:CDY52262 | ProteinID:CDY52262.1 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00005249001 |
| PFAM:PF03081 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF27 | SUPFAM:SSF74788 | UniParc:UPI0004EADE36 | SEG:seg |
Description
BnaC05g52060DBnaC05g52060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IQQ3]
Coordinates
chrLK033072:-:24996..27411
Molecular Weight (calculated)
72718.9 Da
IEP (calculated)
4.946
GRAVY (calculated)
-0.286
Length
646 amino acids
Sequence
(BLAST)
(BLAST)
001: MESPENSVGF DSDGSLETAE RIILRWDSTA SEEARGKMIF QSDRDEVDRF LRAVDEIQRS VSSLSFSSPP SFSSSSAATD DQEVKANSAL QIAMARLEEE
101: FRNILLSQTS VFEPDSLFLE ESSVSGEDST DAPPEEEEEG SDSGSGSSRL TRRRSSYRST SSIREMDLIS PEAVSDLRSI VQRMVAAGYS RECIQVYGNV
201: RKSAVDTILK QLGIVKISIG DVQKLEWEVV EGKIRKWIRA AKVCVRIVFS SEKRLCSDLF DEEAMGDTCF METVKTSALR LFTFPEAISI SRRSPEKLFK
301: ILDLHDAMGD MLPDIEAIFD SDDSSSRAVY LQASEIQTRL AEAARGILSE FENAVLREPS VVPVPGGTIH PLTRYVMNYI SLISDYKQTL NNLIVSDPST
401: GSDPNPNAPV IDFTELDGKS PLALHLIWLI MVLHFNLEEK SHHYRDASLA HIFIMNNIHY IVQKVKGSPE LREMIGDHYL RKLTGIFRHA ATNYQRSTWV
501: RVLNSLRDEG LHVSGSFSSG VSRSALRERF KAFNAMLEDV HRSQSTWSVP DAQLREELRI SLSEHLIPAY RSFLGRFRGN IESGRHPENY LKYSVEDIDR
601: IVLDFFEGID PFFEFLFTGP FPIVPRWNNL PGNDISLARG LCVAKC
101: FRNILLSQTS VFEPDSLFLE ESSVSGEDST DAPPEEEEEG SDSGSGSSRL TRRRSSYRST SSIREMDLIS PEAVSDLRSI VQRMVAAGYS RECIQVYGNV
201: RKSAVDTILK QLGIVKISIG DVQKLEWEVV EGKIRKWIRA AKVCVRIVFS SEKRLCSDLF DEEAMGDTCF METVKTSALR LFTFPEAISI SRRSPEKLFK
301: ILDLHDAMGD MLPDIEAIFD SDDSSSRAVY LQASEIQTRL AEAARGILSE FENAVLREPS VVPVPGGTIH PLTRYVMNYI SLISDYKQTL NNLIVSDPST
401: GSDPNPNAPV IDFTELDGKS PLALHLIWLI MVLHFNLEEK SHHYRDASLA HIFIMNNIHY IVQKVKGSPE LREMIGDHYL RKLTGIFRHA ATNYQRSTWV
501: RVLNSLRDEG LHVSGSFSSG VSRSALRERF KAFNAMLEDV HRSQSTWSVP DAQLREELRI SLSEHLIPAY RSFLGRFRGN IESGRHPENY LKYSVEDIDR
601: IVLDFFEGID PFFEFLFTGP FPIVPRWNNL PGNDISLARG LCVAKC
001: MEPPENSLDS DGSNLETAER IILRWDSAAT DGARGKMIFQ SDRDEVDRFL RAVDEIQRSL SSVSFSSSSS SAATSAATVV DEHEVKANSA IQIAMARLED
101: EFRNILLSHT TTFEPDSLFL EEPSVSPSLT VEVGEDTTVT PEEEELNSPG GSGSSRLTRR RSSYRSTSSI REMDLISPEA VSDLRSIVQR MVAAGYSREC
201: IQVYGTVRKS AMEAIFKQLG IVKISIGDVQ RLEWEVVEGK IRKWIRAAKV CIRVVFSSEK RLCEQLFDGI CTAMDETCFM ETVKASALRL FTFPEAISIS
301: RRSPEKLFKI LDLHDALTDM LPDIEAIFDS DSSDAIRAQA VEIQSRLAEA ARGILSEFEN AVLREPSIVP VPGGTIHPLT RYVMNYIVMI SDYKQTLDDL
401: IMSNPSTGSD PNTPDMDFTE LDSKSPLDLH LIWLIVVLHF NLEEKSKHYR DTSLAHIFIM NNIHYIVQKV KRSPELREMI GDHYLRKLTG IFRHAATNYQ
501: RATWVRVLNS LRDEGLHVSG SFSSGVSRSA LRERFKAFNT MFEEVHRTQS TWSVPDAQLR EELRISLSEH LIPAYRSFLG RFRGHIESGR HPENYLKYSV
601: EDIETIVLDF FEGYTTPPHL RRR
101: EFRNILLSHT TTFEPDSLFL EEPSVSPSLT VEVGEDTTVT PEEEELNSPG GSGSSRLTRR RSSYRSTSSI REMDLISPEA VSDLRSIVQR MVAAGYSREC
201: IQVYGTVRKS AMEAIFKQLG IVKISIGDVQ RLEWEVVEGK IRKWIRAAKV CIRVVFSSEK RLCEQLFDGI CTAMDETCFM ETVKASALRL FTFPEAISIS
301: RRSPEKLFKI LDLHDALTDM LPDIEAIFDS DSSDAIRAQA VEIQSRLAEA ARGILSEFEN AVLREPSIVP VPGGTIHPLT RYVMNYIVMI SDYKQTLDDL
401: IMSNPSTGSD PNTPDMDFTE LDSKSPLDLH LIWLIVVLHF NLEEKSKHYR DTSLAHIFIM NNIHYIVQKV KRSPELREMI GDHYLRKLTG IFRHAATNYQ
501: RATWVRVLNS LRDEGLHVSG SFSSGVSRSA LRERFKAFNT MFEEVHRTQS TWSVPDAQLR EELRISLSEH LIPAYRSFLG RFRGHIESGR HPENYLKYSV
601: EDIETIVLDF FEGYTTPPHL RRR
Arabidopsis Description
ATEXO70D3EXO70D3 [Source:UniProtKB/TrEMBL;Acc:A0A178V7V7]
SUBAcon: [cytoskeleton,nucleus,cytosol]
SUBAcon: [cytoskeleton,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.