Factsheet for TraesCS5D01G218900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G213100.1	Wheat	cytosol	96.67	97.16
TraesCS5B01G210700.1	Wheat	cytosol	96.01	96.65
HORVU5Hr1G062200.3	Barley	cytosol	94.51	80.8
Os09t0439600-01	Rice	cytosol	83.86	79.0
OQU89565	Sorghum	cytosol	78.87	76.21
Zm00001d020617_P001	Maize	cytosol	80.03	75.39
Zm00001d005816_P001	Maize	cytosol	78.2	73.78
TraesCS7D01G290600.1	Wheat	cytosol	75.37	70.45
GSMUA_Achr10P...	Banana	cytosol	64.56	66.21
GSMUA_Achr9P14390_001	Banana	cytosol	61.06	64.84
CDY02484	Canola	cytosol	31.28	62.25
CDY28574	Canola	cytosol	27.62	61.48
PGSC0003DMT400058947	Potato	cytosol	56.74	56.09
PGSC0003DMT400012539	Potato	extracellular	55.57	56.04
Solyc06g062990.1.1	Tomato	cytosol	55.41	55.87
VIT_09s0002g00910.t01	Wine grape	cytosol	56.24	55.78
Solyc03g122240.2.1	Tomato	nucleus	53.91	55.29
KRH47637	Soybean	endoplasmic reticulum	56.07	53.83
Bra003879.1-P	Field mustard	cytosol, nucleus, plastid	53.24	53.42
GSMUA_Achr10P...	Banana	cytosol	49.58	53.12
CDX68265	Canola	cytosol	53.41	52.71
CDY50639	Canola	cytosol	53.24	52.55
AT3G14090.1	Thale cress	cytoskeleton, cytosol, nucleus	53.24	51.36
AT1G72470.1	Thale cress	nucleus	53.91	51.18
Bra027373.1-P	Field mustard	cytoskeleton, cytosol, nucleus	52.58	51.13
AT1G54090.1	Thale cress	nucleus	52.58	50.8
CDX97543	Canola	cytoskeleton, cytosol, nucleus	52.08	50.65
KRH06215	Soybean	cytosol	55.91	50.37
Bra030907.1-P	Field mustard	cytosol	52.91	50.24
CDY61474	Canola	cytosol	41.43	49.02
CDY52262	Canola	cytoskeleton, cytosol, nucleus	51.91	48.3
TraesCS1D01G029000.1	Wheat	cytosol	30.78	34.45
TraesCS3D01G424900.1	Wheat	cytosol	36.11	32.68
TraesCS7D01G260600.1	Wheat	cytosol	32.11	32.27
TraesCS7D01G133800.1	Wheat	cytosol	34.61	30.86
TraesCS2D01G280500.1	Wheat	nucleus	34.44	30.31
TraesCS3D01G299200.1	Wheat	peroxisome	28.79	28.88
TraesCS3D01G341800.1	Wheat	cytosol	30.62	28.53
TraesCS1D01G293400.1	Wheat	cytosol	30.28	27.83
TraesCS2D01G596000.1	Wheat	cytosol, mitochondrion, nucleus	29.12	27.47
TraesCS4D01G112900.1	Wheat	cytosol, mitochondrion	29.45	27.4
TraesCS4D01G109600.1	Wheat	cytosol	29.28	24.79
TraesCS2D01G596100.1	Wheat	cytosol	25.96	24.49
TraesCS5D01G133200.1	Wheat	cytosol	25.79	24.03
TraesCS5D01G130800.1	Wheat	plastid	28.29	23.61

Protein Annotations

EnsemblPlants:TraesCS5D01G218900.1	EnsemblPlantsGene:TraesCS5D01G218900	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	PANTHER:PTHR12542	PANTHER:PTHR12542:SF27	PFAM:PF03081	SEG:seg	SUPFAM:SSF74788
MapMan:22.6.3.1	:	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:327990370..327992280

Molecular Weight (calculated)

66161.7 Da

IEP (calculated)

6.577

GRAVY (calculated)

-0.243

Length

601 amino acids

Sequence
(BLAST)

001: MDRSAAAELE RAERVVRRWN STASAPAGGG GGGGGGGGED QMLFDGGGDR AEAERFLQAV DDLRRLAPPS PGSPRRTSST GGSGAVQVAM ARLEDEFRHV
101: LASRAVDLEI EVLADLSSLS MCSDRSSFSD VGDAPPPVDD DSVESSVGRR SSYRSMRSIR EIDLLPPEAV TDLNAIASRM AAAGYDRECV QVYASVRKPA
201: VDSALRRLGV EKLTIGDVQR LEWDALEVKI RRWIRAARAA IRGVFASERR LCFLIFHDLP LSNPTIATPA PTTTLAAPFV ETVRGAALQL FGFAEAISIG
301: RRSPEKLFKI IDLHDALADL LPDVSDIFAA SKAGESIYVQ TTEIRARLAD AVRGILSEFE NAVLCDPSKT PVPGGTIHPL TRYVMNYIVL ISDYKTTLSE
401: LIVSRPSASS RVRAEGNELR PPFPDLDLPD PDSQLPLSAH LIWTIVVLEH NLEGKASLYK DPALSHLFLM NNVHYIVHKV KDSPELRGLI GDVYLKRLTG
501: ISKSALRERF KSFNAAFEEA HRVQSGWYVP DTQLKEELRI SIAEKLLPAY RSFLGRFRHH IENGRHPELY IKYTVEDLEI SVTDFFEGSP PPPHNRRRSH
601: G

Best Arabidopsis Sequence Match ( AT1G54090.1 )
(BLAST)

001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ

Arabidopsis Description

ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.