Factsheet for PGSC0003DMT400012539

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

extracellular: 28961394

msms PMID: 28961394 doi

E Elagamey, A Sinha, K Narula, MAE Abdellatef, N Chakraborty, S Chakraborty

National Institute of Plant Genome Research, New Delhi, India., Plant Pathology Research Institute, Agricultural Research Center (ARC), Giza, Egypt.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g062990.1.1	Tomato	cytosol	97.99	97.99
PGSC0003DMT400058947	Potato	cytosol	88.25	86.51
VIT_09s0002g00910.t01	Wine grape	cytosol	77.01	75.74
KRH47637	Soybean	endoplasmic reticulum	77.85	74.12
CDX68265	Canola	cytosol	71.48	69.95
CDY50639	Canola	cytosol	71.31	69.79
Bra003879.1-P	Field mustard	cytosol, nucleus, plastid	69.8	69.45
Os08t0455700-01	Rice	cytosol	4.19	69.44
KRH06215	Soybean	cytosol	77.35	69.12
AT1G72470.1	Thale cress	nucleus	72.32	68.09
GSMUA_Achr10P...	Banana	cytosol	63.76	64.85
GSMUA_Achr9P14390_001	Banana	cytosol	60.74	63.96
Os09t0439600-01	Rice	cytosol	62.75	58.62
OQU89565	Sorghum	cytosol	61.07	58.52
EES13957	Sorghum	cytosol	60.91	57.44
Zm00001d005816_P001	Maize	cytosol	60.74	56.83
Zm00001d020617_P001	Maize	cytosol	60.74	56.74
Zm00001d032075_P001	Maize	cytosol	60.07	56.74
TraesCS5B01G210700.1	Wheat	cytosol	56.54	56.45
TraesCS5A01G213100.1	Wheat	cytosol	56.38	56.19
Zm00001d050095_P001	Maize	cytosol	58.89	56.07
TraesCS7B01G182000.2	Wheat	cytosol	59.73	55.71
TraesCS5D01G218900.1	Wheat	cytosol	56.04	55.57
TraesCS7D01G290600.1	Wheat	cytosol	59.73	55.37
TraesCS7A01G290900.2	Wheat	cytosol	59.56	55.3
HORVU5Hr1G062200.3	Barley	cytosol	61.91	52.49
GSMUA_Achr10P...	Banana	cytosol	49.16	52.23
HORVU7Hr1G064400.2	Barley	cytosol	53.36	45.17
PGSC0003DMT400090181	Potato	cytosol	46.14	41.23
PGSC0003DMT400043775	Potato	cytosol	33.05	34.44
PGSC0003DMT400003687	Potato	nucleus	36.91	33.43
PGSC0003DMT400065456	Potato	cytosol	34.73	33.01
PGSC0003DMT400006075	Potato	cytosol	31.88	32.09
PGSC0003DMT400032221	Potato	nucleus	35.23	31.77
PGSC0003DMT400072333	Potato	cytosol	32.21	30.0
PGSC0003DMT400013431	Potato	nucleus	32.89	29.52
PGSC0003DMT400061436	Potato	plastid	31.71	29.39
PGSC0003DMT400061435	Potato	plastid	31.71	29.39
PGSC0003DMT400040200	Potato	plastid	29.53	29.19
PGSC0003DMT400078145	Potato	mitochondrion	30.37	29.01
PGSC0003DMT400061494	Potato	plastid	30.87	28.98
PGSC0003DMT400052043	Potato	nucleus	33.89	28.94
PGSC0003DMT400028204	Potato	plastid	28.52	28.48
PGSC0003DMT400063083	Potato	cytosol	29.36	27.56
PGSC0003DMT400060448	Potato	plastid	27.85	25.62
Zm00001d050972_P005	Maize	cytosol, peroxisome, plasma membrane	50.84	24.42

Protein Annotations

EntrezGene:102596681	MapMan:22.6.3.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	UniProt:M1A1D4	PFAM:PF03081	EnsemblPlantsGene:PGSC0003DMG400004893	PGSC:PGSC0003DMG400004893	EnsemblPlants:PGSC0003DMT400012539
PANTHER:PTHR12542	PANTHER:PTHR12542:SF27	SUPFAM:SSF74788	UniParc:UPI000296240A	RefSeq:XP_015168911.1	SEG:seg

Description

ATEXO70D1 [Source:PGSC_GENE;Acc:PGSC0003DMG400004893]

Coordinates

chr6:+:48461486..48464918

Molecular Weight (calculated)

68145.1 Da

IEP (calculated)

5.219

GRAVY (calculated)

-0.346

Length

596 amino acids

Sequence
(BLAST)

001: MEPPGNDVVA FESAEKIILR WDSTASEDAR EKMIFAGDRY EIERYLQAVD EIQRSMEFAT LSDDQNKANS AIQIAMARLE DEFRNILIAH TTPMEAESLT
101: DSSPLPEEDY EDDSPLTKDL EHQESNSTCS YRSTNSIREI DLMPSDAIYD LRCIAERMIL AGYLRECIQV YGSVRKSAVD SSFRKLGIEK LSIGDIQRLE
201: WEILETKIRR WIRAAKVCVR ILFASEKKLC EQIFEGLGTA TDDACFMETI KGPAIQLFNF AEAISISRRS PEKLFKILDL HDALSDLLVD IEIVFDSKSS
301: ESIRVQAVEI LSRLAEAARG ILSEFENAVL REPSKVPVPG GTIHPLTRYV MNYISLISDY KQTMSELIVS KPSTGSRYSS DPNTPDMDFA ELESHTPLAL
401: HLIWIAVILQ FNLEGKSKCY RDTSLTHIFM MNNVHYIVQK IKGSPELREM VGDDCLRKLT GKFRQAATNY QRSTWVNVLH CLRDEGLHVK GSFSSGVSKS
501: ALRERFKTFN AMFEEVHRTQ STWLIPDTQL REELRISVSE KLIPAYRSFL GRFRSHIESG RHPENYIKYS GEDIETAVLD FFEGYQVSQH IRRRSE

Best Arabidopsis Sequence Match ( AT1G72470.1 )
(BLAST)

001: MEPHDQTHGG DGGEGENCSV SGFDSAEKVI IRWDATASEE AREKMIFNDP QEVNLYLNAV DEIQKYVSSG GEIENRANSA IQIAMARLED EFRNILVSHS
101: SPINSDSLML SSSSSSHLEV DEDGSSSNNG NEEDDQQEEE ETDLLKRSGS SASTGSATVR LPTGRGSYSR STSSIREIEL IPIESVIHLS WIARRMVSAG
201: YLRECIQVYG SVRKSAVDSS FRRLGIEKLS IGDVQRLNWE ALEQKIRRWI RAAKICVRVV FASEKLLCEH VFESVGAVNI HEACFMETVK GPAIQLFNFA
301: EAISISRRSP EKLFKILDLH DALIELLPDI ESVFDLKSSD SIRVQAAEIL SRLAEAARGI LSEFENAVLR EPSRVPVPGG TIHPLTRYVM NYISLISEYR
401: PTLIDLIMSK PSRNATDSNT PDFDFSELEN NKGPLALHLI WIIVILQFNL EGKSKYYKNA ALSHLFIMNN AHYIVQKIKG SPELREMIGD LYLRKLTGKF
501: RQAATYYQRA AWVKVLYCLR DEGLHTKGSF SSGVSRSALR ERFKSFNALF EEVHRVQSQW LVPDSQLREE LKISILEKLS PAYRSFLGRF RSHIESGKHP
601: ENYIKISVED LETEVLDLFE GYSATQHLRR RSE

Arabidopsis Description

ATEXO70D1Exocyst subunit exo70 family protein D1 [Source:UniProtKB/TrEMBL;Acc:Q9C9E5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.