Factsheet for PGSC0003DMT400013431

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g009880.2.1	Tomato	nucleus	95.48	95.48
CDX97230	Canola	cytosol	18.98	66.67
PGSC0003DMT400006075	Potato	cytosol	59.04	66.22
CDX69666	Canola	cytosol	18.83	66.14
VIT_01s0146g00160.t01	Wine grape	nucleus	55.57	56.42
Bra006183.1-P	Field mustard	nucleus	46.69	49.44
CDX78509	Canola	nucleus	46.54	49.28
CDY69943	Canola	cytosol	46.54	49.28
AT5G13150.1	Thale cress	nucleus	47.44	48.24
Bra008852.1-P	Field mustard	nucleus	46.23	47.82
Os12t0165600-01	Rice	cytosol, plasma membrane	35.09	47.65
KRH36360	Soybean	cytosol	42.92	47.11
GSMUA_Achr6P07200_001	Banana	nucleus	43.07	43.27
PGSC0003DMT400052043	Potato	nucleus	45.33	43.12
TraesCS5B01G122500.1	Wheat	plastid	42.02	42.15
GSMUA_Achr6P25750_001	Banana	endoplasmic reticulum	42.62	40.37
KRG93132	Soybean	cytosol	28.46	40.21
Zm00001d023513_P001	Maize	plastid	40.66	39.53
Os11t0167600-00	Rice	plasma membrane	40.66	39.02
Zm00001d041908_P001	Maize	plastid	39.76	39.0
Zm00001d004846_P001	Maize	cytosol, plastid	39.76	38.6
Zm00001d053192_P001	Maize	cytosol, plastid	39.46	38.36
TraesCS5D01G130800.1	Wheat	plastid	41.57	38.33
EES16704	Sorghum	plastid	40.21	38.25
EES08037	Sorghum	cytosol, plastid	39.16	37.85
TraesCS4D01G109600.1	Wheat	cytosol	40.21	37.61
TraesCS5A01G122400.1	Wheat	mitochondrion	41.72	37.48
TraesCS4B01G112100.1	Wheat	cytosol	40.06	37.46
TraesCS4A01G208500.1	Wheat	cytosol	39.91	37.43
HORVU4Hr1G020050.1	Barley	cytosol, plastid	39.76	37.29
GSMUA_Achr6P18090_001	Banana	nucleus	24.1	34.71
PGSC0003DMT400012539	Potato	extracellular	29.52	32.89
PGSC0003DMT400065456	Potato	cytosol	30.57	32.38
PGSC0003DMT400058947	Potato	cytosol	29.07	31.74
HORVU5Hr1G039240.1	Barley	plastid	33.89	30.91
PGSC0003DMT400090181	Potato	cytosol	30.87	30.73
PGSC0003DMT400043775	Potato	cytosol	25.6	29.72
PGSC0003DMT400003687	Potato	nucleus	28.31	28.57
PGSC0003DMT400072333	Potato	cytosol	27.26	28.28
PGSC0003DMT400063083	Potato	cytosol	26.05	27.24
PGSC0003DMT400032221	Potato	nucleus	26.51	26.63
PGSC0003DMT400060448	Potato	plastid	24.25	24.85
PGSC0003DMT400028204	Potato	plastid	22.14	24.62
PGSC0003DMT400061435	Potato	plastid	23.8	24.57
PGSC0003DMT400061494	Potato	plastid	23.49	24.57
PGSC0003DMT400061436	Potato	plastid	23.64	24.42
PGSC0003DMT400040200	Potato	plastid	22.14	24.38
PGSC0003DMT400078145	Potato	mitochondrion	22.74	24.2
GSMUA_Achr10P...	Banana	cytosol	25.6	21.85

Protein Annotations

Gene3D:1.20.1280.170	MapMan:22.6.3.1	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0008150	GO:GO:0009987	UniProt:M1A2U2	PFAM:PF03081	EnsemblPlantsGene:PGSC0003DMG400005240	PGSC:PGSC0003DMG400005240
EnsemblPlants:PGSC0003DMT400013431	PANTHER:PTHR12542	PANTHER:PTHR12542:SF15	SUPFAM:SSF74788	UniParc:UPI0002959859	SEG:seg

Description

ATEXO70C1 [Source:PGSC_GENE;Acc:PGSC0003DMG400005240]

Coordinates

chr1:+:8741114..8743284

Molecular Weight (calculated)

75914.5 Da

IEP (calculated)

6.164

GRAVY (calculated)

-0.585

Length

664 amino acids

Sequence
(BLAST)

001: MVKNHLDKNG SFTGSPKPPH PTTSTDPHSR KSSQEELDHS LNHHNEDVKK LSDDIDRFID ELSTCHDKSN PPEVPEIIET FSKIIESKIS KHNTCENSST
101: RLCKMTEEDN FFVEAVSRLS KLTNSLSEFP SGSTTTRSLN RTSMVLQRAM TLMEEDLRAL LEDSSSSHVK VYKNSSFNSN RLLVDGEQCS LTLSDSSGEE
201: EHPSFPPDTV TRMNRIASTM IMAGYETECC QVYSITRRNA CVEQMKKLEF EKINMEDVQR MQWDSLEGEI TRWIRAVKSC STTLFPGEKR LGDSVFSESP
301: MNSQSLFSNL ARAIVIQLLD FAEAVTMTKR SAEKLFKYLD MYEALRDLIP SIKNSSSNEC ENELNSEIQA TIDRLGESAV SIFSDLENSI KNDVARTPVP
401: GGAVHPLTRY VMNYLKYACE YKITLEHIFH QHVKFEESNA NANSNSPTKL MPTLEVEAEN NSPHCDSETT PFSIQLVTIM DLLDTNLEAK SNLYRDPALR
501: DIFLMNNGRY ILQKVKGSAE IHQVMGDTWC RRRSTIVRHY HKNYQRETFG KVLQILTHDG MQVHGKVAKT TVKERFKNFN VIFDEIHRSQ STWVVSDEQL
601: QSELRVSISS LVIPAYRSFF GRFRQYLDNA KQAEKYIKYQ PEDIEILIDD FFDGNSTSMA RRKT

Best Arabidopsis Sequence Match ( AT5G13150.1 )
(BLAST)

001: MEKSGNHHHA NESSENHDHK SEDHENKQHS DELHSSTPES QSESSEHSLV EVMEAVVDFI QTLSSEKDPL GEISPAVESF PEAVDSLVSK MESSGLGRDE
101: TEDSVFIDAV NRISKSVMRL RELKLDSTPV SSWLNRASSV QHRAVSLLDE EFRHLLDRSR EEEKKNNNNN NHHDGSNSDH NNSSTNDSDR CVLQDHEEAE
201: EESFHDFSPE SISTLKKIAG AMISAGYEAE CCMSYEMSRR HAFKEELTEV GFEGINVEDV QRIGWESLEG EIASWISIVR RCSTVLFPGE LSLCNAVFPD
301: QDHSSVRKRL FTGLVSAVTI RFLDFSGAVV LTKRSSEKLF KFLDMYETLR DLIPAVEQSD SDLIQEIKLA QTRLGEAAVT IFGELEKSIK SDNGRTPVPS
401: GAVHPLTRYT MNYLKYACEY KETLDQVFQH YEANQTDNKP EPETKPRQQQ REDDEEYKVS AFARQMIRVM ELLDANLEIK SRLYRDPSLR FIFLMNNGRY
501: ILQKIKGSIE IRDLMGQSWT RKRSTELRQY HKSYQRETWG KVLQCMNQEG LQVNGKVSKP VLKERFKIFN AMFDEIHKTQ STWIVSDEQM QSELRVSISS
601: LVIPAYRSFF GRYKQHLDSG KQTDKYVKYQ PEDIESFIDD LFDGNPTSMA RKR

Arabidopsis Description

ATEXO70C1Exocyst subunit exo70 family protein C1 [Source:UniProtKB/TrEMBL;Acc:Q9FY95]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.