Factsheet for PGSC0003DMT400003687

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g088800.1.1	Tomato	nucleus	97.87	97.72
PGSC0003DMT400032221	Potato	nucleus	72.19	71.86
VIT_14s0068g00250.t01	Wine grape	cytosol	65.65	66.26
KRH45035	Soybean	cytosol	64.44	62.26
KRH01279	Soybean	cytosol	62.16	60.15
Bra025399.1-P	Field mustard	cytosol	39.97	52.71
CDY04082	Canola	cytosol	45.14	51.83
CDY44387	Canola	cytosol	44.68	51.4
Bra033104.1-P	Field mustard	cytosol	49.09	50.0
AT3G29400.1	Thale cress	cytosol	49.7	49.7
CDX86365	Canola	cytosol	48.18	49.0
CDX85273	Canola	cytosol	47.72	48.31
Os01t0763750-01	Rice	cytosol	41.03	44.85
GSMUA_Achr4P23470_001	Banana	cytosol	40.58	44.72
PGSC0003DMT400063083	Potato	cytosol	42.71	44.25
TraesCS3D01G299200.1	Wheat	peroxisome	40.12	44.07
TraesCS3A01G302600.1	Wheat	peroxisome	39.97	43.91
TraesCS3B01G333800.1	Wheat	cytosol	39.67	43.57
HORVU3Hr1G073850.1	Barley	cytosol, nucleus, peroxisome	39.97	43.54
KXG33434	Sorghum	peroxisome	39.97	43.4
HORVU3Hr1G073910.1	Barley	cytosol	39.36	43.24
GSMUA_Achr7P00520_001	Banana	cytosol	39.36	42.74
Zm00001d043365_P001	Maize	peroxisome	39.82	41.0
PGSC0003DMT400090181	Potato	cytosol	40.58	40.03
PGSC0003DMT400012539	Potato	extracellular	33.43	36.91
PGSC0003DMT400058947	Potato	cytosol	34.04	36.84
PGSC0003DMT400065456	Potato	cytosol	31.31	32.85
PGSC0003DMT400043775	Potato	cytosol	28.12	32.34
PGSC0003DMT400028204	Potato	plastid	27.96	30.82
PGSC0003DMT400072333	Potato	cytosol	28.72	29.53
PGSC0003DMT400061435	Potato	plastid	28.12	28.77
PGSC0003DMT400061494	Potato	plastid	27.66	28.66
PGSC0003DMT400061436	Potato	plastid	27.96	28.62
PGSC0003DMT400013431	Potato	nucleus	28.57	28.31
PGSC0003DMT400078145	Potato	mitochondrion	26.6	28.04
PGSC0003DMT400040200	Potato	plastid	25.38	27.69
PGSC0003DMT400006075	Potato	cytosol	24.32	27.03
PGSC0003DMT400060448	Potato	plastid	25.23	25.62
PGSC0003DMT400052043	Potato	nucleus	26.6	25.07

Protein Annotations

EntrezGene:102586317	MapMan:22.6.3.1	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0008150	GO:GO:0009987	UniProt:M0ZM58	PFAM:PF03081	EnsemblPlantsGene:PGSC0003DMG400001454	PGSC:PGSC0003DMG400001454
EnsemblPlants:PGSC0003DMT400003687	PANTHER:PTHR12542	PANTHER:PTHR12542:SF20	SUPFAM:SSF74788	UniParc:UPI000295E707	RefSeq:XP_006338368.1
RefSeq:XP_006338369.1	SEG:seg	:	:	:	:

Description

ATEXO70E1 [Source:PGSC_GENE;Acc:PGSC0003DMG400001454]

Coordinates

chr2:+:45623743..45626822

Molecular Weight (calculated)

75553.4 Da

IEP (calculated)

4.686

GRAVY (calculated)

-0.417

Length

658 amino acids

Sequence
(BLAST)

001: MGDCESSVPL MEEEENLIAA AQNIVKALGS NRTLTDDARK ILADLGSQLS SITRVSEPED EGAGETEEQL IELEEELNLV QSKVMNWEVG KSMIWDCGQE
101: EAYEYLRYVD QGRKLIERLE SLNLVKGSKE DELLRRAHDL LQTAMNRLEE EFTHLLVHNR QPFEPEHMSF RSSEDDTLDD GSIVSFGDDS IEDVVQRDSM
201: SRSSGEYIIE LVHPDVIPDL KCIANLMFDS NYGRECSQAF INVRKDGLDD CLFILEVEKL SIEDVLKMEW NSLNSKIRRW IRAMKIFVRI YLASEKWLSD
301: QIFSELEAVG SVCFAEASKA SILQLLNFGE AIAIGPHQPE KLIRILDMYE VLADLIPDID AMYSDEVGLC VRRECQDILR SLGDCAKATF LEFENAVASS
401: ISANPFPGGG IHHLTRYVMN YMKTLIDYSK TLDELLKGHE KEDSVAILPD MTPDREEDNT DRRCYISPLA QHFRSFTSIL ECNLEDKARL YKDESLGHLF
501: LMNNIHYMAE KVKNSNLRTI LGDGWIRKHN WKFQHHAMSY ERATWSSILS FLRDEGLYNP GSNSISRTLL KERLNNFYLS FEDVYKSQTG WSIPDSQLRE
601: DLRISTSLKV IQGYRTFFGR HANHISDKHI RYTADDLENF LLDLFEGSPR SLHGSHRK

Best Arabidopsis Sequence Match ( AT3G29400.1 )
(BLAST)

001: MGEFEVDGEE KLIVAAKYLV KELRSGKSLT KNAKNVLGNL LLELSRVVIA EDTQDRDEED EIGEIEERLN VVSEKIMTRE VDESMIWDLG SDEGNLYLDA
101: VNELRSLIDR LDGSEELSLR KAHDVLQIAM ARLEDEFKHL LVENRLPFEL EHSSFRSIEA DHGVEEESMA SFGAASTEDL ILGSNNDSRR NSGDVVVDLV
201: NPDVILDLKN IANTMIASGY DRECIQVCTM VRKDALDEFL YNHEVEKLSI EDVLRMDWAT LNTNIKKWVR VMRDIVQVYL LSEKSLDNQI FGDLNEIGLT
301: CFVDTVKAPM MQLLNFGEAV SLGPRQPEKL LRILEMYELA SELLPEIDAL FLDHPGSSVR TEYREVMRRL GDCARTTFLE FKSAIAADVS SHPFPGGAVH
401: PLTNYVMNYL MALTDFKHTL DSLLMEHDDA EDLTIPPSPD IINPVMVEEE STYENSSSPE KFLAMTRHFY SITSVLEANL QEKSKLYKDV SLQHIFLLNN
501: IHYMTRKVLK SELRHIFGDK WNRKHTWKFQ QQATEYERAT WLPVLSFLKD DGSGSGPGSG SGSGSKNLRP RERFQGFNTA FEEVYKAQTG WLISDEGLRE
601: DVRTKASMWV IQAYWTFYSR HKNSVSERYI KYTTDDIERL LLDLFAGSSK SLNNSYRR

Arabidopsis Description

ATEXO70E1Exocyst subunit exo70 family protein E1 [Source:UniProtKB/TrEMBL;Acc:Q9LIA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.