Factsheet for VIT_14s0068g00250.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g088800.1.1	Tomato	nucleus	66.72	66.01
PGSC0003DMT400003687	Potato	nucleus	66.26	65.65
KRH45035	Soybean	cytosol	66.56	63.73
KRH01279	Soybean	cytosol	65.8	63.09
PGSC0003DMT400032221	Potato	nucleus	61.2	60.36
VIT_17s0000g07350.t01	Wine grape	cytosol	57.21	58.01
Bra025399.1-P	Field mustard	cytosol	41.41	54.11
CDY44387	Canola	cytosol	46.01	52.45
CDY04082	Canola	cytosol	46.01	52.36
Bra033104.1-P	Field mustard	cytosol	50.0	50.46
CDX86365	Canola	cytosol	49.08	49.46
AT3G29400.1	Thale cress	cytosol	49.85	49.39
GSMUA_Achr4P23470_001	Banana	cytosol	44.48	48.58
CDX85273	Canola	cytosol	48.31	48.46
GSMUA_Achr7P00520_001	Banana	cytosol	43.87	47.19
Os01t0763750-01	Rice	cytosol	41.87	45.35
TraesCS3D01G299200.1	Wheat	peroxisome	40.8	44.41
TraesCS3A01G302600.1	Wheat	peroxisome	40.64	44.24
KXG33434	Sorghum	peroxisome	40.95	44.06
TraesCS3B01G333800.1	Wheat	cytosol	40.34	43.91
HORVU3Hr1G073850.1	Barley	cytosol, nucleus, peroxisome	40.64	43.87
HORVU3Hr1G073910.1	Barley	cytosol	40.18	43.74
VIT_17s0000g01450.t01	Wine grape	cytosol	43.1	42.77
Zm00001d043365_P001	Maize	peroxisome	41.26	42.1
VIT_09s0002g00910.t01	Wine grape	cytosol	34.66	37.29
VIT_06s0004g04010.t01	Wine grape	plastid	30.52	32.31
VIT_06s0004g07440.t01	Wine grape	cytosol	30.67	31.9
VIT_00s0317g00140.t01	Wine grape	plastid	29.14	30.55
VIT_08s0007g02340.t01	Wine grape	cytosol	29.6	29.78
VIT_08s0040g02730.t01	Wine grape	plastid	28.99	29.76
VIT_13s0073g00170.t01	Wine grape	cytosol	29.45	29.54
VIT_01s0146g00160.t01	Wine grape	nucleus	28.53	28.44

Protein Annotations

EntrezGene:100261660	wikigene:100261660	MapMan:22.6.3.1	ProteinID:CCB46928	ProteinID:CCB46928.1	ncoils:Coil
InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	UniProt:F6H486	EMBL:FN595232	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	EntrezGene:LOC100261660	wikigene:LOC100261660	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF20
SUPFAM:SSF74788	TIGR:TC60632	TIGR:TC63930	UniParc:UPI00015C8CF4	ArrayExpress:VIT_14s0068g00250	EnsemblPlantsGene:VIT_14s0068g00250
EnsemblPlants:VIT_14s0068g00250.t01	unigene:Vvi.13822	RefSeq:XP_002280135	RefSeq:XP_002280135.2	RefSeq:XP_010660602.1	RefSeq:XP_010660603.1

Description

No Description!

Coordinates

chr14:-:23967557..23970244

Molecular Weight (calculated)

73957.3 Da

IEP (calculated)

4.561

GRAVY (calculated)

-0.370

Length

652 amino acids

Sequence
(BLAST)

001: MGDCKSVAPG LEGEENLIAA AQHIVKALGS NKNLTDDVRK ILVDLGTQLS TITIADENKS EGVNEIEDRL VAAQDKVMSW EADQCMVWDS GPEEAAEYLK
101: AVEEVRKLTE VLESLCLNKD SEGDELLRRA YDVLQTAMAR LEEEFRYLLF QNRQPFEPEH MSFRSNDEDV VDEGSIISFE DDPVEDSLQT DSISRSSEDY
201: IIHLVHPEVI PDLKSIANLM LSSNYDQECS QAYISVRKDA LDECLSILEM EKLSIEDVLK MEWAGLNSKI RRWVRAMKIF VRVYLASEKW LSDQVFGEVG
301: SVSSACFVEA SRASIFQLLN FGEAIVIGPH KPEKLMRILD MYEVLADLLP DIDGIYQEDI GSSVRTECRE VLGGLGDCVR ATFLEFENAI ASNTSTNPFA
401: GGGIHPLTRY VMNYIKILTD YSNTINLLFE DHDRADPGSL SSNTSPVTEE ENKSGSSSCS TPTGLHFRAL ISVLECNLED KSKLYRDVAL QHLFLMNNIH
501: YMTEKVKNSE LRDVFGDEWI RKHNWKFQQH AMNYERASWS SILLLLKEEG IQNSNSNSPS KTVLKDRLRS FNVAFEELYK SQTAWLIPDS QLRDELQIST
601: SLKVVQAYRT FVGRHNPHIS DKHIKYSPDD LQNFLLDLFE GSPKSLPNTH RR

Best Arabidopsis Sequence Match ( AT3G29400.1 )
(BLAST)

001: MGEFEVDGEE KLIVAAKYLV KELRSGKSLT KNAKNVLGNL LLELSRVVIA EDTQDRDEED EIGEIEERLN VVSEKIMTRE VDESMIWDLG SDEGNLYLDA
101: VNELRSLIDR LDGSEELSLR KAHDVLQIAM ARLEDEFKHL LVENRLPFEL EHSSFRSIEA DHGVEEESMA SFGAASTEDL ILGSNNDSRR NSGDVVVDLV
201: NPDVILDLKN IANTMIASGY DRECIQVCTM VRKDALDEFL YNHEVEKLSI EDVLRMDWAT LNTNIKKWVR VMRDIVQVYL LSEKSLDNQI FGDLNEIGLT
301: CFVDTVKAPM MQLLNFGEAV SLGPRQPEKL LRILEMYELA SELLPEIDAL FLDHPGSSVR TEYREVMRRL GDCARTTFLE FKSAIAADVS SHPFPGGAVH
401: PLTNYVMNYL MALTDFKHTL DSLLMEHDDA EDLTIPPSPD IINPVMVEEE STYENSSSPE KFLAMTRHFY SITSVLEANL QEKSKLYKDV SLQHIFLLNN
501: IHYMTRKVLK SELRHIFGDK WNRKHTWKFQ QQATEYERAT WLPVLSFLKD DGSGSGPGSG SGSGSKNLRP RERFQGFNTA FEEVYKAQTG WLISDEGLRE
601: DVRTKASMWV IQAYWTFYSR HKNSVSERYI KYTTDDIERL LLDLFAGSSK SLNNSYRR

Arabidopsis Description

ATEXO70E1Exocyst subunit exo70 family protein E1 [Source:UniProtKB/TrEMBL;Acc:Q9LIA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.