Factsheet for VIT_17s0000g01450.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g111320.1.1	Tomato	cytosol	66.82	66.02
PGSC0003DMT400090181	Potato	cytosol	66.51	65.52
KRH03960	Soybean	nucleus	66.21	65.32
KRH57228	Soybean	cytosol	66.06	65.07
AT5G50380.1	Thale cress	nucleus	66.97	64.42
CDX71629	Canola	cytosol	64.08	63.02
CDY05812	Canola	cytosol, plastid	63.62	62.39
Bra014060.1-P	Field mustard	plastid	63.47	62.24
GSMUA_Achr9P01500_001	Banana	cytosol	52.51	57.21
TraesCS7B01G035500.1	Wheat	cytosol	40.49	56.84
GSMUA_Achr6P20710_001	Banana	cytosol, plastid	56.47	56.73
HORVU2Hr1G069050.1	Barley	cytosol	42.31	53.46
HORVU7Hr1G028060.3	Barley	cytosol	51.75	51.13
GSMUA_Achr10P...	Banana	cytosol	49.77	50.86
TraesCS7A01G134400.1	Wheat	cytosol	52.05	50.74
TraesCS7D01G133800.1	Wheat	cytosol	52.05	50.74
TraesCS1D01G029000.1	Wheat	cytosol	41.4	50.65
EES01976	Sorghum	cytosol	50.53	50.46
TraesCS2D01G280500.1	Wheat	nucleus	52.36	50.37
TraesCS2B01G298900.1	Wheat	cytosol	52.05	50.15
TraesCS2A01G281600.1	Wheat	cytosol	51.6	50.0
Os02t0505400-02	Rice	plasma membrane	52.21	49.78
TraesCS3A01G429600.1	Wheat	cytosol	50.23	49.7
TraesCS3D01G424900.1	Wheat	cytosol	50.23	49.7
TraesCS3B01G467500.1	Wheat	cytosol	50.38	49.63
HORVU3Hr1G094570.3	Barley	cytosol	50.38	49.33
KXG26069	Sorghum	cytosol	52.36	49.14
Os04t0382200-01	Rice	cytosol	51.14	48.84
EES05115	Sorghum	cytosol	50.68	48.83
Zm00001d000403_P001	Maize	extracellular	50.38	48.75
Zm00001d012020_P001	Maize	cytosol	49.62	48.51
Zm00001d025206_P001	Maize	cytosol	51.75	48.43
Zm00001d042331_P001	Maize	cytosol, plastid	42.01	48.42
TraesCS7A01G259600.1	Wheat	cytosol, nucleus, plastid	38.66	43.72
VIT_14s0068g00250.t01	Wine grape	cytosol	42.77	43.1
VIT_09s0002g00910.t01	Wine grape	cytosol	39.73	43.07
HORVU7Hr1G054020.2	Barley	plasma membrane	38.36	42.93
EES15315	Sorghum	cytosol	39.12	42.9
TraesCS7D01G260600.1	Wheat	cytosol	38.81	42.64
TraesCS7B01G157600.1	Wheat	cytosol, nucleus, plastid	38.97	42.38
Os08t0530300-01	Rice	plasma membrane	38.97	42.24
Zm00001d031614_P001	Maize	cytosol	38.36	41.93
VIT_17s0000g07350.t01	Wine grape	cytosol	40.03	40.9
VIT_06s0004g07440.t01	Wine grape	cytosol	34.09	35.73
VIT_01s0146g00160.t01	Wine grape	nucleus	33.64	33.79
VIT_06s0004g04010.t01	Wine grape	plastid	31.2	33.28
VIT_13s0073g00170.t01	Wine grape	cytosol	31.2	31.54
VIT_08s0007g02340.t01	Wine grape	cytosol	31.05	31.48
VIT_00s0317g00140.t01	Wine grape	plastid	29.07	30.71
VIT_08s0040g02730.t01	Wine grape	plastid	29.22	30.24

Protein Annotations

EntrezGene:100268151	wikigene:100268151	MapMan:22.6.3.1	EMBL:AM426713	ProteinID:CAN62485	ProteinID:CAN62485.1
ProteinID:CCB43324	ProteinID:CCB43324.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	UniProt:F6GST9	EMBL:FN594950
GO:GO:0000145	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005886	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020
EntrezGene:LOC100268151	wikigene:LOC100268151	PFAM:PF03081	PANTHER:PTHR12542	PANTHER:PTHR12542:SF19	SUPFAM:SSF74788
TIGR:TC55718	TIGR:TC65896	UniParc:UPI00015C9E34	ArrayExpress:VIT_17s0000g01450	EnsemblPlantsGene:VIT_17s0000g01450	EnsemblPlants:VIT_17s0000g01450.t01
unigene:Vvi.3472	RefSeq:XP_002279988	RefSeq:XP_002279988.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr17:+:1030024..1032285

Molecular Weight (calculated)

74225.2 Da

IEP (calculated)

4.623

GRAVY (calculated)

-0.358

Length

657 amino acids

Sequence
(BLAST)

001: MATTTTISGG GGAGGAGGED RVMATAQQIV KSLNTTKEVT EDMLLIFSSF DNRLSNISNL IETKTEVDQF EAAEKVIMRW DSNSEASRHT LPWDEAPEEA
101: AEYLAAVDEI LQMTEDLAIR SDGEMMDRAE SALQVAMTRL EDEFRHILIR NTVPLDADRL YGSIRRVSLS FPTNEGEIMG DFDGFVDDDQ ENSCYHERGG
201: SLGDDVCVDL IQPDAVAELK EIADRMIRSG YEKECCQVYS SVRRDVLDEC LSILGVEKLS IEEVQKIEWR SLDEKMKKWM QAVKIVVRVL LWGEKRLCDQ
301: AFSGSDLIKE VCFTETAKSC VMQLLNFGEA VAIGRRSSEK LFRILDMYDA LADVLPDLEA LFSDESGQFV WSEARGVLAG LGEAAKGTFA EFENAVRSET
401: SRRPIQGGEI HPLTRYVMNY VKLVVDYSET LNTLLESEDD DESAHLQNRD GDNLQLGNTP PIGRRLLLLM SCLESNLTEK SKLYEDNAMQ YIFLMNNILY
501: IVQKVKDSEL GKILGDHWVR KRRGQIRQYA TSYLRASWSK VLACLKDEGI GGSSSNASKM ALKERFKNFN ACFEDIYRIQ TAWKVHDAQL REELRISISE
601: KVIPAYRSFM GRFGNNLESG RNAGKYIKYT PEDLENYLLD LFEGSSLVLH HMRRKTA

Best Arabidopsis Sequence Match ( AT5G50380.1 )
(BLAST)

001: MAATTTTAAS INAEAGGGGG GAEDRVLATA QQIMKSLNTP KEVREDMLLI FSSFDNRLSN IKTAMTNQEE NQNDALVARL EAAESVIHRW DGGNDSSRHS
101: SSSSGNYRSS SFSLSFDESP EEATEFLSAV DEIISLLEDL SSENKPDMVD RADSALQMAM SQLEDEFRRI LIRNTVPLDA ERLYGSMRRV SLSFADGDVV
201: EDFENFGLVA DGDGSGSRRR LFHERGGSIG CDLWVDLINP TAVEDLKEIA ERMIRAGYEK ECVQVYSSVR RDALDDCLMI LGVEKLSIEE VQKIDWKSMD
301: EKMKKWIQAV KITVRVLLVG EKKICDEIFS SSESSKEVCF NETTKSCVMQ LLNFGEAVAI GRRSSEKLFR ILDMYDALAN VLQTLEVMVT DCFVCNETKG
401: VLEALGDAAR GTFVEFENNV RNETSKRPTT NGEVHPMIRY VMNYMKLIVD YAVTLNSLLE SNESSGVSGD DSTEEMSPLA KRILGLITSL ESNLEDKSKL
501: YEDGGLQHVF MMNNIYYIVQ KVKDSELGKL LGDDWVRKRR GQIRQYATGY LRASWSRVLS ALRDESMGGS SSGSPSYGQR SNNSSKMALK ERFRGFNASF
601: EELYRLQTAW KVPDPQLREE LRISISEKVI PAYRAFFGRN RSQLEGGRHA GKYIKYTPDD LESYLPDLFE GNQLVIHHPR RKS

Arabidopsis Description

ATEXO70F1Exocyst subunit exo70 family protein F1 [Source:UniProtKB/TrEMBL;Acc:F4K8Y6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.