Factsheet for VIT_09s0002g00910.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g062990.1.1	Tomato	cytosol	75.91	77.18
PGSC0003DMT400012539	Potato	extracellular	75.74	77.01
PGSC0003DMT400058947	Potato	cytosol	75.41	75.16
Solyc03g122240.2.1	Tomato	nucleus	72.11	74.57
KRH47637	Soybean	endoplasmic reticulum	75.25	72.84
Os08t0455700-01	Rice	cytosol	4.29	72.22
KRH06215	Soybean	cytosol	74.59	67.77
CDX68265	Canola	cytosol	67.33	67.0
Bra003879.1-P	Field mustard	cytosol, nucleus, plastid	66.17	66.94
CDY50639	Canola	cytosol	67.16	66.83
AT1G72470.1	Thale cress	nucleus	68.81	65.88
GSMUA_Achr10P...	Banana	cytosol	62.87	65.02
GSMUA_Achr9P14390_001	Banana	cytosol	60.23	64.49
OQU89565	Sorghum	cytosol	61.06	59.49
Os09t0439600-01	Rice	cytosol	61.39	58.31
Zm00001d020617_P001	Maize	cytosol	60.4	57.37
EES13957	Sorghum	cytosol	59.41	56.96
TraesCS5B01G210700.1	Wheat	cytosol	56.11	56.95
TraesCS5A01G213100.1	Wheat	cytosol	55.94	56.69
Zm00001d005816_P001	Maize	cytosol	59.57	56.67
TraesCS5D01G218900.1	Wheat	cytosol	55.78	56.24
Zm00001d032075_P001	Maize	cytosol	58.42	56.1
Zm00001d050095_P001	Maize	cytosol	57.43	55.59
TraesCS7B01G182000.2	Wheat	cytosol	57.92	54.93
TraesCS7A01G290900.2	Wheat	cytosol	57.92	54.67
TraesCS7D01G290600.1	Wheat	cytosol	57.92	54.59
GSMUA_Achr10P...	Banana	cytosol	49.67	53.65
HORVU5Hr1G062200.3	Barley	cytosol	60.4	52.06
HORVU7Hr1G064400.2	Barley	cytosol	52.48	45.17
VIT_17s0000g01450.t01	Wine grape	cytosol	43.07	39.73
VIT_17s0000g07350.t01	Wine grape	cytosol	36.96	34.84
VIT_14s0068g00250.t01	Wine grape	cytosol	37.29	34.66
VIT_06s0004g07440.t01	Wine grape	cytosol	34.98	33.81
VIT_06s0004g04010.t01	Wine grape	plastid	33.66	33.12
VIT_01s0146g00160.t01	Wine grape	nucleus	33.83	31.35
VIT_13s0073g00170.t01	Wine grape	cytosol	33.5	31.23
VIT_08s0007g02340.t01	Wine grape	cytosol	33.0	30.86
VIT_08s0040g02730.t01	Wine grape	plastid	31.35	29.92
VIT_00s0317g00140.t01	Wine grape	plastid	30.69	29.9
Zm00001d050972_P005	Maize	cytosol, peroxisome, plasma membrane	48.18	23.53

Protein Annotations

EntrezGene:100254947	wikigene:100254947	MapMan:22.6.3.1	ProteinID:CCB59272	ProteinID:CCB59272.1	InterPro:Cullin_repeat-like_dom_sf
InterPro:Exo70	UniProt:F6HXU7	EMBL:FN596494	GO:GO:0000145	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150	GO:GO:0009987
InterPro:IPR021934	EntrezGene:LOC100254947	wikigene:LOC100254947	PFAM:PF03081	PFscan:PS51516	PANTHER:PTHR12542
PANTHER:PTHR12542:SF27	SUPFAM:SSF74788	InterPro:Sox_C	UniParc:UPI000210A4C3	ArrayExpress:VIT_09s0002g00910	EnsemblPlantsGene:VIT_09s0002g00910
EnsemblPlants:VIT_09s0002g00910.t01	unigene:Vvi.22511	RefSeq:XP_002272396	RefSeq:XP_002272396.2	SEG:seg	:

Description

No Description!

Coordinates

chr9:+:662189..664480

Molecular Weight (calculated)

69014.2 Da

IEP (calculated)

5.481

GRAVY (calculated)

-0.296

Length

606 amino acids

Sequence
(BLAST)

001: MEPPESITLD AAEKIILRWD STASEETRDR LIFEGDRREV DQYLQAVDEI QRSMSAATIS DGDCKVNSTI QIAMARLEDE FRSILISNTS PLETDSLIDS
101: SFSTHSSLIT EHKYPEDERV LGQVGESPKA GESSSRASAS YRSTNSIREL DLIPAEAIDD LRCIAERMIS AGYLRECVQV YGSVRKSAVD SSFRRLGVEN
201: LSIGDIQRRE WDVLEVKIRR WIRAAKVCVR ILFASEKRLC EQIFKGLDTA IDDACFIETV KGPAIQLFKF AEAISISRRT PEKLFKMLDL HDALLDLLPD
301: IDAVFESELS ESIRIQAAEI LSRLAEAARG ILSEFENAVL SEPSKVPVPG GTIHPLTRYV MNYINLISDY KQTLIELIVS KPSTGSRYSG DQTMPDMDFA
401: EFEGRTPLAL HLIWIIVILQ FNVEGKSKCY RDNALAHLFI MNNVHYIVQK AKGSEELREI IGDDYLKKLT WKYQQAATSY QRTTWVRVLY CLRDEGLHVS
501: GSFSSGVSKS ALRERFKAFN AMFEEVHRTQ AMWHVPDSQL REELRISITE KLLPAYRSFL GRFRSHIESG RHPENYIKYS ADDLETAVLD FFEGYPVSQH
601: LRRRSQ

Best Arabidopsis Sequence Match ( AT1G72470.1 )
(BLAST)

001: MEPHDQTHGG DGGEGENCSV SGFDSAEKVI IRWDATASEE AREKMIFNDP QEVNLYLNAV DEIQKYVSSG GEIENRANSA IQIAMARLED EFRNILVSHS
101: SPINSDSLML SSSSSSHLEV DEDGSSSNNG NEEDDQQEEE ETDLLKRSGS SASTGSATVR LPTGRGSYSR STSSIREIEL IPIESVIHLS WIARRMVSAG
201: YLRECIQVYG SVRKSAVDSS FRRLGIEKLS IGDVQRLNWE ALEQKIRRWI RAAKICVRVV FASEKLLCEH VFESVGAVNI HEACFMETVK GPAIQLFNFA
301: EAISISRRSP EKLFKILDLH DALIELLPDI ESVFDLKSSD SIRVQAAEIL SRLAEAARGI LSEFENAVLR EPSRVPVPGG TIHPLTRYVM NYISLISEYR
401: PTLIDLIMSK PSRNATDSNT PDFDFSELEN NKGPLALHLI WIIVILQFNL EGKSKYYKNA ALSHLFIMNN AHYIVQKIKG SPELREMIGD LYLRKLTGKF
501: RQAATYYQRA AWVKVLYCLR DEGLHTKGSF SSGVSRSALR ERFKSFNALF EEVHRVQSQW LVPDSQLREE LKISILEKLS PAYRSFLGRF RSHIESGKHP
601: ENYIKISVED LETEVLDLFE GYSATQHLRR RSE

Arabidopsis Description

ATEXO70D1Exocyst subunit exo70 family protein D1 [Source:UniProtKB/TrEMBL;Acc:Q9C9E5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.