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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:cytosol
 endoplasmic reticulum: 28499913
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH06215 Soybean cytosol 92.97 87.26
Solyc06g062990.1.1 Tomato cytosol 74.28 78.02
PGSC0003DMT400012539 Potato extracellular 74.12 77.85
PGSC0003DMT400058947 Potato cytosol 74.28 76.48
Solyc03g122240.2.1 Tomato nucleus 70.93 75.77
VIT_09s0002g00910.t01 Wine grape cytosol 72.84 75.25
Bra003879.1-P Field mustard cytosol, nucleus, plastid 67.57 70.62
CDX68265 Canola cytosol 68.37 70.28
CDY50639 Canola cytosol 68.21 70.11
Os08t0455700-01 Rice cytosol 3.99 69.44
AT1G72470.1 Thale cress nucleus 68.53 67.77
GSMUA_Achr9P14390_001 Banana cytosol 59.42 65.72
GSMUA_Achr10P... Banana cytosol 61.18 65.36
OQU89565 Sorghum cytosol 58.15 58.52
EES13957 Sorghum cytosol 58.95 58.39
Os09t0439600-01 Rice cytosol 59.42 58.31
Zm00001d032075_P001 Maize cytosol 58.15 57.69
Zm00001d050095_P001 Maize cytosol 57.35 57.35
TraesCS5B01G210700.1 Wheat cytosol 54.31 56.95
Zm00001d020617_P001 Maize cytosol 57.83 56.74
TraesCS5A01G213100.1 Wheat cytosol 54.15 56.69
Zm00001d005816_P001 Maize cytosol 57.67 56.67
TraesCS5D01G218900.1 Wheat cytosol 53.83 56.07
TraesCS7B01G182000.2 Wheat cytosol 57.03 55.87
TraesCS7D01G290600.1 Wheat cytosol 57.35 55.83
TraesCS7A01G290900.2 Wheat cytosol 57.03 55.61
GSMUA_Achr10P... Banana cytosol 48.72 54.37
HORVU5Hr1G062200.3 Barley cytosol 59.42 52.92
HORVU7Hr1G064400.2 Barley cytosol 50.64 45.03
KRH03960 Soybean nucleus 39.78 37.39
KRH57228 Soybean cytosol 39.62 37.18
KRH18527 Soybean cytosol 28.27 36.57
KRH45035 Soybean cytosol 37.54 34.51
KRH01279 Soybean cytosol 37.38 34.41
KRG90170 Soybean cytosol 20.29 34.05
KRH72760 Soybean cytosol 33.23 32.5
KRH17115 Soybean cytosol 33.23 32.3
KRH22987 Soybean cytosol, mitochondrion, plastid 29.23 31.94
KRH34637 Soybean cytosol 32.43 31.67
KRG92152 Soybean cytosol 32.75 31.64
KRH25009 Soybean mitochondrion 30.83 31.43
KRH22988 Soybean plastid 24.12 31.39
KRH29876 Soybean mitochondrion 30.51 31.36
KRG88728 Soybean cytosol 32.27 30.98
KRH10327 Soybean plastid 29.23 30.86
KRH63230 Soybean cytosol 30.99 30.79
KRH54704 Soybean cytosol 30.35 30.11
KRG95862 Soybean plastid 29.71 30.1
KRH67580 Soybean plastid 29.87 29.45
KRH36360 Soybean cytosol 27.8 28.76
KRH32349 Soybean plastid 27.96 28.14
KRH70050 Soybean nucleus 30.67 27.08
KRG94595 Soybean nucleus 30.51 26.86
KRH06895 Soybean cytosol 30.35 26.65
KRH19755 Soybean mitochondrion, plastid 22.36 26.57
KRG93132 Soybean cytosol 18.53 24.68
Zm00001d050972_P005 Maize cytosol, peroxisome, plasma membrane 48.72 24.58
Protein Annotations
MapMan:22.6.3.1EMBL:ACUP02004156InterPro:Cullin_repeat-like_dom_sfInterPro:Exo70EnsemblPlantsGene:GLYMA_07G041100GO:GO:0000145
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006810GO:GO:0006887
GO:GO:0008150GO:GO:0009987UniProt:K7KZK2EnsemblPlants:KRH47637ProteinID:KRH47637ProteinID:KRH47637.1
PFAM:PF03081PANTHER:PTHR12542PANTHER:PTHR12542:SF27SUPFAM:SSF74788UniParc:UPI0002338399SEG:seg
Description
hypothetical protein
Coordinates
chr7:-:3408905..3410785
Molecular Weight (calculated)
70698.7 Da
IEP (calculated)
5.292
GRAVY (calculated)
-0.321
Length
626 amino acids
Sequence
(BLAST)
001: MESLPLETAE KIILRWDSTA SEEARDKMIF SGGGDRDEAD LYLQAVDEIQ RSLSSVSVSV SSDKVNSAIQ IAMARLEDEF RNILISHTNP FDPSSEDEPS
101: QTLDSLSTTS SPKHPLTNEE TTEEESDSNH NTISTPLFRF NSDGAASSVR SSVNSVNSSS YRSTSSIREI DLIPSDAVYD LRCIAERMVS SGYLRECIQV
201: YGSVRKSSVD ASFRKLQIEK LSIGDVQRLE WEQLENKIRR WIRAAKVCVR TLFASEKKLC EQIFDGVGTS IDDACFMETV KGPAIQLFNF AEAISISRRS
301: PEKLFKILDL HDALTDLMPD IDVVFDSKSS ESIRVQAAEI LSRLGEAARG ILSEFENAVL REPSRVAVPG GTIHPLTRYV MNYISLISDY KVTLNELIVS
401: KPSTGSRYSG DPGIPDMDLS EFEEKTPLDV HLIWIIVILQ FNLDGKSKHY RDASLAHLFV MNNVHYIVQK VRGSPELREM IGDDYLKKLT GKFRQAATSY
501: QRATWVRVLY CLRDEGLHVS GGFSSGVSKS ALRERFKAFN AMFEEVHRTQ AVWLIPDLQL REELRISISE KLIPAYRSFL GRFRSHIESG RHPENYIKYS
601: VEDLEDAVLD FFEGIPVSQH LRRRAE
Best Arabidopsis Sequence Match ( AT1G72470.1 )
(BLAST)
001: MEPHDQTHGG DGGEGENCSV SGFDSAEKVI IRWDATASEE AREKMIFNDP QEVNLYLNAV DEIQKYVSSG GEIENRANSA IQIAMARLED EFRNILVSHS
101: SPINSDSLML SSSSSSHLEV DEDGSSSNNG NEEDDQQEEE ETDLLKRSGS SASTGSATVR LPTGRGSYSR STSSIREIEL IPIESVIHLS WIARRMVSAG
201: YLRECIQVYG SVRKSAVDSS FRRLGIEKLS IGDVQRLNWE ALEQKIRRWI RAAKICVRVV FASEKLLCEH VFESVGAVNI HEACFMETVK GPAIQLFNFA
301: EAISISRRSP EKLFKILDLH DALIELLPDI ESVFDLKSSD SIRVQAAEIL SRLAEAARGI LSEFENAVLR EPSRVPVPGG TIHPLTRYVM NYISLISEYR
401: PTLIDLIMSK PSRNATDSNT PDFDFSELEN NKGPLALHLI WIIVILQFNL EGKSKYYKNA ALSHLFIMNN AHYIVQKIKG SPELREMIGD LYLRKLTGKF
501: RQAATYYQRA AWVKVLYCLR DEGLHTKGSF SSGVSRSALR ERFKSFNALF EEVHRVQSQW LVPDSQLREE LKISILEKLS PAYRSFLGRF RSHIESGKHP
601: ENYIKISVED LETEVLDLFE GYSATQHLRR RSE
Arabidopsis Description
ATEXO70D1Exocyst subunit exo70 family protein D1 [Source:UniProtKB/TrEMBL;Acc:Q9C9E5]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.