Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G213100.1 | Wheat | cytosol | 96.82 | 96.66 |
| TraesCS5D01G218900.1 | Wheat | cytosol | 96.65 | 96.01 |
| HORVU5Hr1G062200.3 | Barley | cytosol | 95.98 | 81.51 |
| Os09t0439600-01 | Rice | cytosol | 84.59 | 79.15 |
| OQU89565 | Sorghum | cytosol | 79.23 | 76.05 |
| Zm00001d020617_P001 | Maize | cytosol | 80.4 | 75.24 |
| Zm00001d005816_P001 | Maize | cytosol | 78.56 | 73.63 |
| TraesCS7B01G182000.2 | Wheat | cytosol | 75.71 | 70.74 |
| GSMUA_Achr10P... | Banana | cytosol | 65.33 | 66.55 |
| GSMUA_Achr9P14390_001 | Banana | cytosol | 61.64 | 65.02 |
| CDY02484 | Canola | cytosol | 31.49 | 62.25 |
| CDY28574 | Canola | cytosol | 27.64 | 61.11 |
| PGSC0003DMT400012539 | Potato | extracellular | 56.45 | 56.54 |
| PGSC0003DMT400058947 | Potato | cytosol | 57.45 | 56.41 |
| Solyc06g062990.1.1 | Tomato | cytosol | 56.28 | 56.38 |
| VIT_09s0002g00910.t01 | Wine grape | cytosol | 56.95 | 56.11 |
| Solyc03g122240.2.1 | Tomato | nucleus | 54.61 | 55.63 |
| KRH47637 | Soybean | endoplasmic reticulum | 56.95 | 54.31 |
| Bra003879.1-P | Field mustard | cytosol, nucleus, plastid | 54.1 | 53.92 |
| GSMUA_Achr10P... | Banana | cytosol | 50.08 | 53.3 |
| CDX68265 | Canola | cytosol | 54.1 | 53.04 |
| CDY50639 | Canola | cytosol | 53.94 | 52.87 |
| AT3G14090.1 | Thale cress | cytoskeleton, cytosol, nucleus | 53.94 | 51.69 |
| AT1G72470.1 | Thale cress | nucleus | 54.77 | 51.66 |
| Bra027373.1-P | Field mustard | cytoskeleton, cytosol, nucleus | 53.43 | 51.62 |
| AT1G54090.1 | Thale cress | nucleus | 53.6 | 51.45 |
| CDX97543 | Canola | cytoskeleton, cytosol, nucleus | 52.93 | 51.13 |
| Bra030907.1-P | Field mustard | cytosol | 53.77 | 50.71 |
| KRH06215 | Soybean | cytosol | 56.62 | 50.67 |
| CDY61474 | Canola | cytosol | 42.04 | 49.41 |
| CDY52262 | Canola | cytoskeleton, cytosol, nucleus | 52.76 | 48.76 |
| TraesCS7B01G035500.1 | Wheat | cytosol | 29.98 | 38.25 |
| TraesCS3B01G467500.1 | Wheat | cytosol | 36.85 | 32.98 |
| TraesCS7B01G157600.1 | Wheat | cytosol, nucleus, plastid | 32.33 | 31.95 |
| TraesCS2B01G298900.1 | Wheat | cytosol | 34.51 | 30.21 |
| TraesCS3B01G333800.1 | Wheat | cytosol | 29.15 | 29.05 |
| TraesCS3B01G380100.1 | Wheat | cytosol | 31.16 | 28.62 |
| TraesCS2B01G602800.1 | Wheat | mitochondrion | 29.98 | 28.1 |
| TraesCS1B01G307200.1 | Wheat | cytosol | 30.65 | 28.02 |
| TraesCS4B01G115200.1 | Wheat | cytosol, mitochondrion | 30.32 | 28.02 |
| TraesCS5B01G122500.1 | Wheat | plastid | 29.15 | 26.28 |
| TraesCS2B01G602900.1 | Wheat | plastid | 26.13 | 24.57 |
| TraesCS4B01G112100.1 | Wheat | cytosol | 28.98 | 24.37 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G210700.1 | EnsemblPlantsGene:TraesCS5B01G210700 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 | InterPro:Cullin_repeat-like_dom_sf |
| InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF27 | PFAM:PF03081 | SEG:seg | SUPFAM:SSF74788 |
| MapMan:22.6.3.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr5B:-:381356235..381358133
Molecular Weight (calculated)
65673.0 Da
IEP (calculated)
6.256
GRAVY (calculated)
-0.236
Length
597 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGSAAAELE RAERVVRRWD STASAPAGGG GGGGGEDQML FDGGGDRVEA ERFLQAVDDL RRLAPPSPGS PRRTSSAGAS GAVQVAMARL EDEFRHVLAS
101: RAVDLEIEVL ADLSSLSMCS DRSSFSDVGD APPVDDESVE SSVGRRSSYR SMRSIREIDL LPPEAVNDLN AIASRMAAAG YDRECVQVYA SVRKPAVDSA
201: LRRLGVEKLT IGDVQRLEWD ALEVKIRRWI RAARAAVRGV FASERRLCFL IFHDLPLSNP TIATPAPTTT PAAPFVETVK GAALQLFGFA EAISIGRRSP
301: EKLFKIIDLH DALVDLLPDV SDIFAASKAG EPIYVQTTEI RARLADAVRG VLSEFENAVL RDPSKTPVPG GTIHPLTRYV MNYIVLISDY KTTLSELIVS
401: RPSASSRVPA DGNDLTPSFP DLDLPDPDSQ LPLSAHLIWT IVVLEHNLEG KASLYKDPAL SHLFLMNNVH YIVHKVKDSP ELRGLIGDVY LKRLTGISKS
501: ALRERFKSFN AAFEEAHRAQ SGWYVPDTQL KEELRISIAE KLLPAYRSFL GRFRHHIENG RHPELYIKYT VEDLEISVTD FFEGSPPPPH NRRRSHG
101: RAVDLEIEVL ADLSSLSMCS DRSSFSDVGD APPVDDESVE SSVGRRSSYR SMRSIREIDL LPPEAVNDLN AIASRMAAAG YDRECVQVYA SVRKPAVDSA
201: LRRLGVEKLT IGDVQRLEWD ALEVKIRRWI RAARAAVRGV FASERRLCFL IFHDLPLSNP TIATPAPTTT PAAPFVETVK GAALQLFGFA EAISIGRRSP
301: EKLFKIIDLH DALVDLLPDV SDIFAASKAG EPIYVQTTEI RARLADAVRG VLSEFENAVL RDPSKTPVPG GTIHPLTRYV MNYIVLISDY KTTLSELIVS
401: RPSASSRVPA DGNDLTPSFP DLDLPDPDSQ LPLSAHLIWT IVVLEHNLEG KASLYKDPAL SHLFLMNNVH YIVHKVKDSP ELRGLIGDVY LKRLTGISKS
501: ALRERFKSFN AAFEEAHRAQ SGWYVPDTQL KEELRISIAE KLLPAYRSFL GRFRHHIENG RHPELYIKYT VEDLEISVTD FFEGSPPPPH NRRRSHG
001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
Arabidopsis Description
ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.