Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G028060.3 | Barley | cytosol | 98.29 | 69.17 |
| TraesCS7D01G133800.1 | Wheat | cytosol | 98.29 | 68.25 |
| TraesCS7A01G134400.1 | Wheat | cytosol | 98.29 | 68.25 |
| Os02t0505400-02 | Rice | plasma membrane | 88.68 | 60.23 |
| Zm00001d000403_P001 | Maize | extracellular | 84.4 | 58.17 |
| EES05115 | Sorghum | cytosol | 84.4 | 57.92 |
| TraesCS2B01G298900.1 | Wheat | cytosol | 77.99 | 53.52 |
| GSMUA_Achr9P01500_001 | Banana | cytosol | 59.19 | 45.94 |
| GSMUA_Achr6P20710_001 | Banana | cytosol, plastid | 60.47 | 43.27 |
| VIT_17s0000g01450.t01 | Wine grape | cytosol | 56.84 | 40.49 |
| KRH03960 | Soybean | nucleus | 54.49 | 38.29 |
| KRH57228 | Soybean | cytosol | 54.49 | 38.23 |
| PGSC0003DMT400090181 | Potato | cytosol | 53.42 | 37.48 |
| Bra014060.1-P | Field mustard | plastid | 53.42 | 37.31 |
| Solyc03g111320.1.1 | Tomato | cytosol | 52.78 | 37.14 |
| CDX71629 | Canola | cytosol | 52.99 | 37.13 |
| CDY05812 | Canola | cytosol, plastid | 52.99 | 37.01 |
| AT5G50380.1 | Thale cress | nucleus | 52.99 | 36.31 |
| TraesCS3B01G467500.1 | Wheat | cytosol | 51.5 | 36.13 |
| TraesCS7B01G157600.1 | Wheat | cytosol, nucleus, plastid | 45.3 | 35.1 |
| TraesCS3B01G333800.1 | Wheat | cytosol | 40.81 | 31.89 |
| TraesCS5B01G210700.1 | Wheat | cytosol | 38.25 | 29.98 |
| TraesCS7B01G182000.2 | Wheat | cytosol | 39.96 | 29.26 |
| TraesCS2B01G602800.1 | Wheat | mitochondrion | 34.62 | 25.43 |
| TraesCS5B01G122500.1 | Wheat | plastid | 34.62 | 24.47 |
| TraesCS4B01G115200.1 | Wheat | cytosol, mitochondrion | 33.76 | 24.46 |
| TraesCS1B01G307200.1 | Wheat | cytosol | 33.97 | 24.35 |
| TraesCS3B01G380100.1 | Wheat | cytosol | 33.76 | 24.31 |
| TraesCS4B01G112100.1 | Wheat | cytosol | 34.4 | 22.68 |
| TraesCS2B01G602900.1 | Wheat | plastid | 28.42 | 20.94 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G035500.1 | EnsemblPlantsGene:TraesCS7B01G035500 | Gene3D:1.20.1280.170 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF36 | PFAM:PF03081 | SEG:seg |
| SUPFAM:SSF74788 | MapMan:22.6.3.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:34610659..34612065
Molecular Weight (calculated)
52999.1 Da
IEP (calculated)
5.226
GRAVY (calculated)
-0.453
Length
468 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPFDDHAFD PVRPEAVDDL RAIADRMARA GYARELADAY CNIRRDLLDE YLSVLGVERL SIDEVQRVEW KQLNDKMKKW VQGVKTVVRV LLAGERRLCD
101: QVLAVSDELR EECFVESTKG CIMQILNFGD AVAVCPRSPE KLSRILDMYE ALAEVVPEMK DLCLGSSGDG VISDVQAILD RLGEAVRGTL FEFGKVLQQE
201: SSRRAMTAGE IHPMTRYVMN YLRLLVVYSE TLDGLLDDDG DESNALERPE DKDQDTEHLE SMAPLGRRLL KLMCYLEANL EDKSKLYEDA ALECIFSMNN
301: LLYIVQKVKD SELGKILGDH WVRRHSGKIR QYSKSYLRIS WMKTLSYLRD DVHGSGSGSG SGSGSGHSGS RMSIKEKFKN FNLSFEEIYR NQTLWKVPDP
401: QLREELKISI SENVIPAYRA FLGRYGSQVD GGRNSGKYIK YTPEDLEGQL SDLFEGSPGS ANHSRRRT
101: QVLAVSDELR EECFVESTKG CIMQILNFGD AVAVCPRSPE KLSRILDMYE ALAEVVPEMK DLCLGSSGDG VISDVQAILD RLGEAVRGTL FEFGKVLQQE
201: SSRRAMTAGE IHPMTRYVMN YLRLLVVYSE TLDGLLDDDG DESNALERPE DKDQDTEHLE SMAPLGRRLL KLMCYLEANL EDKSKLYEDA ALECIFSMNN
301: LLYIVQKVKD SELGKILGDH WVRRHSGKIR QYSKSYLRIS WMKTLSYLRD DVHGSGSGSG SGSGSGHSGS RMSIKEKFKN FNLSFEEIYR NQTLWKVPDP
401: QLREELKISI SENVIPAYRA FLGRYGSQVD GGRNSGKYIK YTPEDLEGQL SDLFEGSPGS ANHSRRRT
001: MATPETRGVD SDLETAEKII LRWDSTTSEE AKENLIFQSG GDREEVDRYL KAVDEVQRHI SSISISDEVK ATIQIAMARL EDELRNILIS QTSTFEPDSL
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
101: LLDSSLSSSS FASSSRTELE DDTCDDGNEE EEQQQVDLVL PDGSGSDSGS RRLSRSRRSN SKSTSSIREI DLVTPEAVSD LRSIAQRMIG AGYSRECVQV
201: YGNVRKSAME MIFKQLGIVK LGIGDVQRLD WEAVEVKIRR WIRAAKVCVR VVFASEKRLC EQIFEGTMEE TCFMEIVKTS ALQLFNFPEA ISISRRSPEK
301: LFKILDLHDA ITDLLPDMEE IFDSSSSESI LVQATEIQSR LAEAARGILT EFENAVFREP SVVPVPGGTI HPLTRYVMNY LNLISDYRET LIDLVMTKPC
401: RGLKCTNDRN DPDMDISELE GISPLALHMI WTMVMLQFNL EEKSLHYRDE PLSHIFVMNN VHYIVQKVKS SPELMELIGD KYLRKLTGIF RQAATKYQRA
501: TWVRVLNSLR DEGLHVSGSF SSGVSKSALR ERFKAFNTMF EEVHRIQSTW SVPDTQLREE LRISLSEHLI PAYRSFLGRF RGHIESGRHP ENYLKYSVEN
601: LETAVLDFFE GYTTAPHLRR SQ
Arabidopsis Description
ATEXO70D2At1g54090 [Source:UniProtKB/TrEMBL;Acc:Q9SYG5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.