Factsheet for PGSC0003DMT400058947

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g122240.2.1	Tomato	nucleus	94.9	98.46
PGSC0003DMT400012539	Potato	extracellular	86.51	88.25
VIT_09s0002g00910.t01	Wine grape	cytosol	75.16	75.41
KRH47637	Soybean	endoplasmic reticulum	76.48	74.28
CDX68265	Canola	cytosol	70.07	69.95
CDY50639	Canola	cytosol	70.07	69.95
Bra003879.1-P	Field mustard	cytosol, nucleus, plastid	68.75	69.78
KRH06215	Soybean	cytosol	75.33	68.67
AT1G72470.1	Thale cress	nucleus	70.72	67.93
Os08t0455700-01	Rice	cytosol	3.95	66.67
GSMUA_Achr10P...	Banana	cytosol	63.65	66.04
GSMUA_Achr9P14390_001	Banana	cytosol	60.2	64.66
OQU89565	Sorghum	cytosol	60.69	59.32
Os09t0439600-01	Rice	cytosol	62.01	59.09
EES13957	Sorghum	cytosol	60.69	58.39
Zm00001d032075_P001	Maize	cytosol	59.87	57.69
TraesCS5A01G213100.1	Wheat	cytosol	56.58	57.53
TraesCS5B01G210700.1	Wheat	cytosol	56.41	57.45
Zm00001d020617_P001	Maize	cytosol	60.2	57.37
Zm00001d050095_P001	Maize	cytosol	59.05	57.35
Zm00001d005816_P001	Maize	cytosol	60.03	57.3
TraesCS5D01G218900.1	Wheat	cytosol	56.09	56.74
TraesCS7B01G182000.2	Wheat	cytosol	59.05	56.18
TraesCS7D01G290600.1	Wheat	cytosol	59.21	55.99
TraesCS7A01G290900.2	Wheat	cytosol	58.88	55.76
HORVU5Hr1G062200.3	Barley	cytosol	61.35	53.06
GSMUA_Achr10P...	Banana	cytosol	48.68	52.76
HORVU7Hr1G064400.2	Barley	cytosol	52.8	45.6
PGSC0003DMT400090181	Potato	cytosol	45.56	41.53
PGSC0003DMT400043775	Potato	cytosol	32.07	34.09
PGSC0003DMT400003687	Potato	nucleus	36.84	34.04
PGSC0003DMT400065456	Potato	cytosol	34.54	33.49
PGSC0003DMT400006075	Potato	cytosol	30.43	31.25
PGSC0003DMT400032221	Potato	nucleus	33.72	31.01
PGSC0003DMT400072333	Potato	cytosol	31.91	30.31
PGSC0003DMT400061435	Potato	plastid	31.91	30.17
PGSC0003DMT400061436	Potato	plastid	31.74	30.02
PGSC0003DMT400061494	Potato	plastid	31.25	29.92
PGSC0003DMT400040200	Potato	plastid	29.44	29.68
PGSC0003DMT400078145	Potato	mitochondrion	30.1	29.33
PGSC0003DMT400052043	Potato	nucleus	33.39	29.08
PGSC0003DMT400013431	Potato	nucleus	31.74	29.07
PGSC0003DMT400028204	Potato	plastid	28.45	28.98
PGSC0003DMT400063083	Potato	cytosol	29.61	28.35
PGSC0003DMT400060448	Potato	plastid	26.97	25.31
Zm00001d050972_P005	Maize	cytosol, peroxisome, plasma membrane	49.84	24.42

Protein Annotations

EntrezGene:102600316	MapMan:22.6.3.1	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887	GO:GO:0008150
GO:GO:0009987	UniProt:M1C3K3	PFAM:PF03081	EnsemblPlantsGene:PGSC0003DMG400022899	PGSC:PGSC0003DMG400022899	EnsemblPlants:PGSC0003DMT400058947
PANTHER:PTHR12542	PANTHER:PTHR12542:SF27	SUPFAM:SSF74788	UniParc:UPI0002952FBE	RefSeq:XP_006342931.1	RefSeq:XP_006342932.1
RefSeq:XP_006342933.1	SEG:seg	:	:	:	:

Description

ATEXO70D1 [Source:PGSC_GENE;Acc:PGSC0003DMG400022899]

Coordinates

chr3:+:61355785..61359078

Molecular Weight (calculated)

69231.1 Da

IEP (calculated)

5.282

GRAVY (calculated)

-0.348

Length

608 amino acids

Sequence
(BLAST)

001: MEAPENDAVA FESAEKIILR WDSTVSEEAR EKMIFDGDRY EINRYLHAVD EIQRSMESTT LSDDQDKANS AIQIAMARLE DEFRSILVAH TNAIEADSLT
101: DPSPSPVHSG EFQVPEEDYH DTPTDDDSFT KDLEHQESSS SSYRSTSSIR EVDLMPPVAI YDLRSIAERM ISAGYLRECI QVYGSVRKSA VESSFRKLGI
201: EKLSIGDIQR LDWETLETKI RRWIRAAKVC VRILFASEKK LCEQIFESLG TATDDACFME TIKGPAIQLF NFAEAISISR RSPEKLFKIL DLHDALSDLL
301: PDVEIVFESK SSESIRVQAV EILSRLGEAA RGILSEFENA VLREPSKVPV PGGTIHPLTR YVMNYISLIS DYKKTMGELI VSQPSTGSRY SSDPNTPDMD
401: FADLEGLTPL ALHLIWIIVI LQFNLEGKSK HYRDTSLAHL FMMNNVHYIV HKTKGSPELG EMIVDDFLRK LTGKFRQAAT SYQRATWVRV LHCLRDEGLH
501: VSGSFSSGVS KSALRERFKT FNALFEEVHR TQSTWLIPDT QLREELRISI AEKLIPAYRS FLGRFRSHIE SGRHPENYIK YTVEDLENAV LDFFEGYAVS
601: QHLRRRSQ

Best Arabidopsis Sequence Match ( AT1G72470.1 )
(BLAST)

001: MEPHDQTHGG DGGEGENCSV SGFDSAEKVI IRWDATASEE AREKMIFNDP QEVNLYLNAV DEIQKYVSSG GEIENRANSA IQIAMARLED EFRNILVSHS
101: SPINSDSLML SSSSSSHLEV DEDGSSSNNG NEEDDQQEEE ETDLLKRSGS SASTGSATVR LPTGRGSYSR STSSIREIEL IPIESVIHLS WIARRMVSAG
201: YLRECIQVYG SVRKSAVDSS FRRLGIEKLS IGDVQRLNWE ALEQKIRRWI RAAKICVRVV FASEKLLCEH VFESVGAVNI HEACFMETVK GPAIQLFNFA
301: EAISISRRSP EKLFKILDLH DALIELLPDI ESVFDLKSSD SIRVQAAEIL SRLAEAARGI LSEFENAVLR EPSRVPVPGG TIHPLTRYVM NYISLISEYR
401: PTLIDLIMSK PSRNATDSNT PDFDFSELEN NKGPLALHLI WIIVILQFNL EGKSKYYKNA ALSHLFIMNN AHYIVQKIKG SPELREMIGD LYLRKLTGKF
501: RQAATYYQRA AWVKVLYCLR DEGLHTKGSF SSGVSRSALR ERFKSFNALF EEVHRVQSQW LVPDSQLREE LKISILEKLS PAYRSFLGRF RSHIESGKHP
601: ENYIKISVED LETEVLDLFE GYSATQHLRR RSE

Arabidopsis Description

ATEXO70D1Exocyst subunit exo70 family protein D1 [Source:UniProtKB/TrEMBL;Acc:Q9C9E5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.