Factsheet for PGSC0003DMT400032221

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003687	Potato	nucleus	71.86	72.19
VIT_14s0068g00250.t01	Wine grape	cytosol	60.36	61.2
KRH45035	Soybean	cytosol	58.09	56.39
KRH01279	Soybean	cytosol	56.73	55.15
Bra025399.1-P	Field mustard	cytosol	38.88	51.5
CDY44387	Canola	cytosol	41.3	47.73
CDY04082	Canola	cytosol	41.3	47.64
AT3G29400.1	Thale cress	cytosol	46.29	46.5
Bra033104.1-P	Field mustard	cytosol	45.08	46.13
CDX86365	Canola	cytosol	44.63	45.6
CDX85273	Canola	cytosol	44.48	45.23
GSMUA_Achr4P23470_001	Banana	cytosol	38.73	42.88
TraesCS3D01G299200.1	Wheat	peroxisome	38.12	42.07
Os01t0763750-01	Rice	cytosol	38.28	42.03
GSMUA_Achr7P00520_001	Banana	cytosol	38.43	41.91
TraesCS3A01G302600.1	Wheat	peroxisome	37.97	41.9
KXG33434	Sorghum	peroxisome	38.12	41.58
TraesCS3B01G333800.1	Wheat	cytosol	37.67	41.57
HORVU3Hr1G073850.1	Barley	cytosol, nucleus, peroxisome	37.67	41.23
HORVU3Hr1G073910.1	Barley	cytosol	37.07	40.9
PGSC0003DMT400063083	Potato	cytosol	38.73	40.31
Zm00001d043365_P001	Maize	peroxisome	37.52	38.81
PGSC0003DMT400090181	Potato	cytosol	37.07	36.73
PGSC0003DMT400012539	Potato	extracellular	31.77	35.23
PGSC0003DMT400058947	Potato	cytosol	31.01	33.72
PGSC0003DMT400065456	Potato	cytosol	30.26	31.9
PGSC0003DMT400043775	Potato	cytosol	27.38	31.64
PGSC0003DMT400028204	Potato	plastid	26.02	28.81
PGSC0003DMT400072333	Potato	cytosol	27.23	28.12
PGSC0003DMT400078145	Potato	mitochondrion	26.32	27.88
PGSC0003DMT400061494	Potato	plastid	26.78	27.87
PGSC0003DMT400006075	Potato	cytosol	24.96	27.87
PGSC0003DMT400061435	Potato	plastid	27.08	27.84
PGSC0003DMT400061436	Potato	plastid	27.08	27.84
PGSC0003DMT400013431	Potato	nucleus	26.63	26.51
PGSC0003DMT400040200	Potato	plastid	24.05	26.37
PGSC0003DMT400052043	Potato	nucleus	27.23	25.79
PGSC0003DMT400060448	Potato	plastid	23.3	23.77

Protein Annotations

EntrezGene:102591417	MapMan:22.6.3.1	ncoils:Coil	InterPro:Cullin_repeat-like_dom_sf	InterPro:Exo70	GO:GO:0000145
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006887
GO:GO:0008150	GO:GO:0009987	UniProt:M1AX18	PFAM:PF03081	EnsemblPlantsGene:PGSC0003DMG400012380	PGSC:PGSC0003DMG400012380
EnsemblPlants:PGSC0003DMT400032221	PANTHER:PTHR12542	PANTHER:PTHR12542:SF20	SUPFAM:SSF74788	UniParc:UPI000296E3AC	RefSeq:XP_006343154.1
SEG:seg	:	:	:	:	:

Description

ATEXO70E1 [Source:PGSC_GENE;Acc:PGSC0003DMG400012380]

Coordinates

chr3:-:28684853..28687117

Molecular Weight (calculated)

76071.9 Da

IEP (calculated)

5.029

GRAVY (calculated)

-0.432

Length

661 amino acids

Sequence
(BLAST)

001: MGDSVPVPVL EGEEKLIAAA HQIVKALHNK KDFLTHDARK ILADLGSQLM SSITKLDTLQ QSNSKSLEDQ LNILQNKIMS WEELEDHQSV IWNCGQEYVH
101: DYLTSVDQLL KFTQQLESNN LGVDKPLDDL LISRAHQLVR TAMNRLQQEF KHLLVQNKQP FQPEHMSFRS NEDDDTSIAS FGDDSLEDVL QRDSMSRRSE
201: EYISVVELVH PDVIPDLRCI ANLMFNSNYS TDCSQAFVNV RRDALDDFLF ILEADKLCID DVLKMEWNSL NSKIRRWIRC MNIFVRVYLA SEKWLSDQIF
301: GELDHSVSSV CFVESSKGSI LHLLKFAESV AIGSHQPEKL IRILDMYEVL SDLMPDIDVM FSDDAGLCVR TECQHILTSL AGCARTTFLE FEHAVASSVS
401: ANPFRGGGIH HLTRYVMNYM KTLTDYSKIL NELLKGDEEE EDSPQDMTPD REEEEEDNSN GSSCYISPLA QYFRSFTSIL ECNLDDKSKL YKDESLGHLF
501: LMNNIHYMAE KVKNSHDLRT ILGDDWIRKH NWRFQQHAMN YERATWSSIL SLLREEGVHN PGSNSISRTL LKERLQCFYA AFDEVYKSQT GWLIQDSQLR
601: DDLRISTSLK VIQAYRTFIG RHSNHISDKY IKYGPDDMEN FLLDLFEGSP RSLHGSSHRG K

Best Arabidopsis Sequence Match ( AT3G29400.1 )
(BLAST)

001: MGEFEVDGEE KLIVAAKYLV KELRSGKSLT KNAKNVLGNL LLELSRVVIA EDTQDRDEED EIGEIEERLN VVSEKIMTRE VDESMIWDLG SDEGNLYLDA
101: VNELRSLIDR LDGSEELSLR KAHDVLQIAM ARLEDEFKHL LVENRLPFEL EHSSFRSIEA DHGVEEESMA SFGAASTEDL ILGSNNDSRR NSGDVVVDLV
201: NPDVILDLKN IANTMIASGY DRECIQVCTM VRKDALDEFL YNHEVEKLSI EDVLRMDWAT LNTNIKKWVR VMRDIVQVYL LSEKSLDNQI FGDLNEIGLT
301: CFVDTVKAPM MQLLNFGEAV SLGPRQPEKL LRILEMYELA SELLPEIDAL FLDHPGSSVR TEYREVMRRL GDCARTTFLE FKSAIAADVS SHPFPGGAVH
401: PLTNYVMNYL MALTDFKHTL DSLLMEHDDA EDLTIPPSPD IINPVMVEEE STYENSSSPE KFLAMTRHFY SITSVLEANL QEKSKLYKDV SLQHIFLLNN
501: IHYMTRKVLK SELRHIFGDK WNRKHTWKFQ QQATEYERAT WLPVLSFLKD DGSGSGPGSG SGSGSKNLRP RERFQGFNTA FEEVYKAQTG WLISDEGLRE
601: DVRTKASMWV IQAYWTFYSR HKNSVSERYI KYTTDDIERL LLDLFAGSSK SLNNSYRR

Arabidopsis Description

ATEXO70E1Exocyst subunit exo70 family protein E1 [Source:UniProtKB/TrEMBL;Acc:Q9LIA2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.