Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G073910.1 | Barley | cytosol | 98.68 | 99.5 |
| TraesCS3A01G302600.1 | Wheat | peroxisome | 95.7 | 96.49 |
| TraesCS3B01G333800.1 | Wheat | cytosol | 95.36 | 96.16 |
| TraesCS3D01G299200.1 | Wheat | peroxisome | 95.2 | 95.99 |
| KXG33434 | Sorghum | peroxisome | 77.81 | 77.56 |
| Os01t0763750-01 | Rice | cytosol | 76.32 | 76.58 |
| Zm00001d043365_P001 | Maize | peroxisome | 76.16 | 71.99 |
| GSMUA_Achr4P23470_001 | Banana | cytosol | 48.01 | 48.58 |
| Bra025399.1-P | Field mustard | cytosol | 37.75 | 45.69 |
| GSMUA_Achr7P00520_001 | Banana | cytosol | 45.7 | 45.54 |
| CDY44387 | Canola | cytosol | 39.57 | 41.78 |
| CDY04082 | Canola | cytosol | 39.57 | 41.71 |
| VIT_14s0068g00250.t01 | Wine grape | cytosol | 43.87 | 40.64 |
| PGSC0003DMT400003687 | Potato | nucleus | 43.54 | 39.97 |
| Solyc02g088800.1.1 | Tomato | nucleus | 43.54 | 39.91 |
| VIT_17s0000g07350.t01 | Wine grape | cytosol | 41.56 | 39.04 |
| Bra033104.1-P | Field mustard | cytosol | 41.23 | 38.54 |
| KRH01279 | Soybean | cytosol | 43.05 | 38.24 |
| KRH45035 | Soybean | cytosol | 43.05 | 38.18 |
| CDX86365 | Canola | cytosol | 40.4 | 37.71 |
| PGSC0003DMT400032221 | Potato | nucleus | 41.23 | 37.67 |
| CDX85273 | Canola | cytosol | 40.23 | 37.38 |
| AT3G29400.1 | Thale cress | cytosol | 40.23 | 36.93 |
| KRH54704 | Soybean | cytosol | 38.41 | 36.77 |
| KRH63230 | Soybean | cytosol | 37.75 | 36.19 |
| Bra012987.1-P | Field mustard | cytosol | 32.12 | 35.27 |
| CDY02176 | Canola | cytosol | 32.12 | 35.27 |
| HORVU2Hr1G069050.1 | Barley | cytosol | 30.13 | 35.0 |
| PGSC0003DMT400063083 | Potato | cytosol | 35.76 | 34.02 |
| Solyc03g115070.1.1 | Tomato | cytosol | 35.76 | 34.02 |
| HORVU7Hr1G028060.3 | Barley | cytosol | 35.93 | 32.63 |
| HORVU7Hr1G054020.2 | Barley | plasma membrane | 30.3 | 31.18 |
| AT5G61010.1 | Thale cress | cytosol | 32.95 | 31.14 |
| HORVU3Hr1G094570.3 | Barley | cytosol | 34.44 | 31.0 |
| HORVU4Hr1G021040.3 | Barley | mitochondrion | 29.47 | 27.26 |
| HORVU5Hr1G062200.3 | Barley | cytosol | 30.46 | 26.17 |
| HORVU3Hr1G088110.3 | Barley | cytosol, plastid | 28.97 | 25.22 |
| HORVU7Hr1G064400.2 | Barley | cytosol | 29.14 | 25.0 |
| HORVU2Hr1G123350.29 | Barley | cytosol | 22.19 | 24.72 |
| HORVU2Hr1G123320.1 | Barley | cytosol | 29.3 | 24.69 |
| HORVU5Hr1G040140.3 | Barley | cytosol | 24.34 | 24.54 |
| HORVU1Hr1G070390.1 | Barley | cytosol, mitochondrion | 27.81 | 24.28 |
| HORVU4Hr1G020050.1 | Barley | cytosol, plastid | 26.99 | 23.02 |
| CDY23090 | Canola | nucleus | 33.94 | 21.86 |
| HORVU5Hr1G039240.1 | Barley | plastid | 22.02 | 18.27 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G073850.1 | EnsemblPlantsGene:HORVU3Hr1G073850 | Gene3D:1.20.1280.170 | GO:GO:0000145 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006887 | GO:GO:0008150 | GO:GO:0009987 |
| InterPro:Cullin_repeat-like_dom_sf | InterPro:Exo70 | PANTHER:PTHR12542 | PANTHER:PTHR12542:SF49 | PFAM:PF03081 | SEG:seg |
| SUPFAM:SSF74788 | UniParc:UPI00029496F1 | UniProt:M0X2R1 | MapMan:22.6.3.1 | : | : |
Description
No Description!
Coordinates
chrchr3H:-:556294872..556298196
Molecular Weight (calculated)
68719.4 Da
IEP (calculated)
5.095
GRAVY (calculated)
-0.282
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MMAPELDKQY SNIQLGEEVG LCDIKLALQA LRKKILSLDF HNSLHVHDPQ NSFEYLEVLY KLRQLSEKLG NLDPGGEAKE HKELTVYADD LFELAMARLE
101: EEFVYLLTYY KQPLEQELLS FRSTEDGSTD EFSSSSFSEE QSEGKSTQTG SSGGSEYFVA DLIQPGALSA VKSIANFMFL SDYNNECCQA YITARQGAID
201: EFIGSLHIDK HSMEELMSTK WNKLSASIKR WNRAMKAFVR VYLASERRLS SLVFGDLSGT AVDLCFYEIS FSSVMQLLSF YESVAIGPCK PEKLFRILDM
301: YEVLDDLLPE AEFLFQAGGN DMVLAEYHEV LLQLGESASK TFAEFKYAIQ SYTSSSAVPT GAVHPLTKYV MNYIKAVTVY SKTLDSLLKD AEHFSADTQS
401: VPHSCTHFTA TALHLQSVAA VLEANLEAGS RLYRDGRLRN IFMMNNICYM VQKVKNSDLK SFLGDDWIRL HNRMFQHQAT NYERASWSQV LSYLSDDGLC
501: AAGDATSRKI IREKFKNFNL SFEDVYRVQT AWSVPDDQLR EDVRISISLK VIQAYRTFVG RYSSFLDGSK QRDRYIKYRP EDLEELLLDL FEGTQKSLQH
601: SGRV
101: EEFVYLLTYY KQPLEQELLS FRSTEDGSTD EFSSSSFSEE QSEGKSTQTG SSGGSEYFVA DLIQPGALSA VKSIANFMFL SDYNNECCQA YITARQGAID
201: EFIGSLHIDK HSMEELMSTK WNKLSASIKR WNRAMKAFVR VYLASERRLS SLVFGDLSGT AVDLCFYEIS FSSVMQLLSF YESVAIGPCK PEKLFRILDM
301: YEVLDDLLPE AEFLFQAGGN DMVLAEYHEV LLQLGESASK TFAEFKYAIQ SYTSSSAVPT GAVHPLTKYV MNYIKAVTVY SKTLDSLLKD AEHFSADTQS
401: VPHSCTHFTA TALHLQSVAA VLEANLEAGS RLYRDGRLRN IFMMNNICYM VQKVKNSDLK SFLGDDWIRL HNRMFQHQAT NYERASWSQV LSYLSDDGLC
501: AAGDATSRKI IREKFKNFNL SFEDVYRVQT AWSVPDDQLR EDVRISISLK VIQAYRTFVG RYSSFLDGSK QRDRYIKYRP EDLEELLLDL FEGTQKSLQH
601: SGRV
001: MGEFEVDGEE KLIVAAKYLV KELRSGKSLT KNAKNVLGNL LLELSRVVIA EDTQDRDEED EIGEIEERLN VVSEKIMTRE VDESMIWDLG SDEGNLYLDA
101: VNELRSLIDR LDGSEELSLR KAHDVLQIAM ARLEDEFKHL LVENRLPFEL EHSSFRSIEA DHGVEEESMA SFGAASTEDL ILGSNNDSRR NSGDVVVDLV
201: NPDVILDLKN IANTMIASGY DRECIQVCTM VRKDALDEFL YNHEVEKLSI EDVLRMDWAT LNTNIKKWVR VMRDIVQVYL LSEKSLDNQI FGDLNEIGLT
301: CFVDTVKAPM MQLLNFGEAV SLGPRQPEKL LRILEMYELA SELLPEIDAL FLDHPGSSVR TEYREVMRRL GDCARTTFLE FKSAIAADVS SHPFPGGAVH
401: PLTNYVMNYL MALTDFKHTL DSLLMEHDDA EDLTIPPSPD IINPVMVEEE STYENSSSPE KFLAMTRHFY SITSVLEANL QEKSKLYKDV SLQHIFLLNN
501: IHYMTRKVLK SELRHIFGDK WNRKHTWKFQ QQATEYERAT WLPVLSFLKD DGSGSGPGSG SGSGSKNLRP RERFQGFNTA FEEVYKAQTG WLISDEGLRE
601: DVRTKASMWV IQAYWTFYSR HKNSVSERYI KYTTDDIERL LLDLFAGSSK SLNNSYRR
101: VNELRSLIDR LDGSEELSLR KAHDVLQIAM ARLEDEFKHL LVENRLPFEL EHSSFRSIEA DHGVEEESMA SFGAASTEDL ILGSNNDSRR NSGDVVVDLV
201: NPDVILDLKN IANTMIASGY DRECIQVCTM VRKDALDEFL YNHEVEKLSI EDVLRMDWAT LNTNIKKWVR VMRDIVQVYL LSEKSLDNQI FGDLNEIGLT
301: CFVDTVKAPM MQLLNFGEAV SLGPRQPEKL LRILEMYELA SELLPEIDAL FLDHPGSSVR TEYREVMRRL GDCARTTFLE FKSAIAADVS SHPFPGGAVH
401: PLTNYVMNYL MALTDFKHTL DSLLMEHDDA EDLTIPPSPD IINPVMVEEE STYENSSSPE KFLAMTRHFY SITSVLEANL QEKSKLYKDV SLQHIFLLNN
501: IHYMTRKVLK SELRHIFGDK WNRKHTWKFQ QQATEYERAT WLPVLSFLKD DGSGSGPGSG SGSGSKNLRP RERFQGFNTA FEEVYKAQTG WLISDEGLRE
601: DVRTKASMWV IQAYWTFYSR HKNSVSERYI KYTTDDIERL LLDLFAGSSK SLNNSYRR
Arabidopsis Description
ATEXO70E1Exocyst subunit exo70 family protein E1 [Source:UniProtKB/TrEMBL;Acc:Q9LIA2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.